BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,227,892	A→G	E31G (GAA→GGA)	ygjJ →	protein YgjJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,227,892	0	A	G	100.0%	1225.7 / NA	335	E31G (GAA→GGA)	ygjJ	protein YgjJ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (161/174); total (161/174)

Only 100 of 337 total aligned reads displayed.

CAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATAT  >  NC_000913/3227755‑3228027

     aTAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATgac                                                                                                                                   <  1:2193858/140‑1 (MQ=255)

       aaaaGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGTAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATgacga                                                                                                                                 >  1:3398226/1‑140 (MQ=255)

       aaaaGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATgacga                                                                                                                                 >  1:1047475/1‑140 (MQ=255)

               gTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATgacgac                                                                                                                                >  1:567798/1‑133 (MQ=255)

               gTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACaaaaa                                                                                                                         >  2:2808919/1‑140 (MQ=255)

                tACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATgac                                                                                                                                   <  2:2898219/129‑1 (MQ=255)

                tACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAac                                                                                                                        >  1:3220681/1‑140 (MQ=255)

                       tCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCa                                                                                                                 >  1:1145237/1‑140 (MQ=255)

                          ttAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAAt                                                                                                               >  1:2082305/1‑139 (MQ=255)

                            aGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTAc                                                                                                            >  2:3029502/1‑140 (MQ=255)

                                  tGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGAc                                                                                                      <  2:1745582/140‑1 (MQ=255)

                                   ggATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACa                                                                                                     >  2:2259087/1‑140 (MQ=255)

                                   ggATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACa                                                                                                     <  1:2739594/140‑1 (MQ=255)

                                        aaCACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACAtcttc                                                                                                >  2:3351863/1‑140 (MQ=255)

                                         acacAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACAtcttct                                                                                               >  2:1724552/1‑140 (MQ=255)

                                              aTGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTc                                                                                          >  1:2643184/1‑140 (MQ=255)

                                               tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                         >  1:1767541/1‑140 (MQ=255)

                                               tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                         >  2:2365034/1‑140 (MQ=255)

                                               tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCa                                                                                         >  2:349047/1‑140 (MQ=255)

                                               tGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGAAATCTTCTCCTTcc                                                                                         >  2:1067789/1‑139 (MQ=255)

                                                            tGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGGACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACg                                                                            <  1:2442841/140‑1 (MQ=255)

                                                             gCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACgg                                                                           <  2:1020413/140‑1 (MQ=255)

                                                             gCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACgg                                                                           <  1:2708523/140‑1 (MQ=255)

                                                              cACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGc                                                                          >  2:3463636/1‑140 (MQ=255)

                                                                 cATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑aa                                                                      <  2:503712/140‑1 (MQ=255)

                                                                  aTGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AAt                                                                     >  1:929650/1‑140 (MQ=255)

                                                                   tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACgg                                                                           <  1:1920006/134‑1 (MQ=255)

                                                                   tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AAtt                                                                    >  1:2661198/1‑140 (MQ=255)

                                                                   tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AAtt                                                                    >  1:2122523/1‑140 (MQ=255)

                                                                   tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AAtt                                                                    >  2:1370176/1‑140 (MQ=255)

                                                                   tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AAtt                                                                    >  1:1317477/1‑140 (MQ=255)

                                                                   tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AAtt                                                                    >  1:2487530/1‑140 (MQ=255)

                                                                   tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AAtt                                                                    >  1:141596/1‑140 (MQ=255)

                                                                   tGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AAtt                                                                    >  1:3020114/1‑140 (MQ=255)

                                                                    gCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTa                                                                   <  2:1299907/140‑1 (MQ=255)

                                                                    gCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTa                                                                   <  2:2698131/140‑1 (MQ=255)

                                                                        agCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAgggg                                                               >  2:1829191/1‑140 (MQ=255)

                                                                        agCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAgggg                                                               >  1:1975199/1‑140 (MQ=255)

                                                                        agCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAgg                                                                 <  1:3130397/138‑1 (MQ=255)

                                                                        agCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAgg                                                                 >  2:3130397/1‑138 (MQ=255)

                                                                         gCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAgg                                                                 <  1:289890/137‑1 (MQ=255)

                                                                         gCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGt                                                              <  2:141596/140‑1 (MQ=255)

                                                                          cATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGtt                                                             >  2:2517460/1‑140 (MQ=255)

                                                                          cATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGtt                                                             <  1:3171189/140‑1 (MQ=255)

                                                                          cATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGtt                                                             >  1:1284293/1‑140 (MQ=255)

                                                                          cATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGtt                                                             >  2:2625198/1‑140 (MQ=255)

                                                                          cATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGt                                                              <  2:1080138/139‑1 (MQ=255)

                                                                           aTTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtg                                                            <  1:375666/140‑1 (MQ=255)

                                                                           aTTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtg                                                            <  2:2661198/140‑1 (MQ=255)

                                                                             tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTGGGGGTtggt                                                          <  2:2122523/140‑1 (MQ=255)

                                                                             tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtggt                                                          <  1:107706/140‑1 (MQ=255)

                                                                             tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtggt                                                          >  1:79866/1‑140 (MQ=255)

                                                                             tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtggt                                                          <  2:3246241/140‑1 (MQ=255)

                                                                              aCTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtggtg                                                         <  1:1633274/140‑1 (MQ=255)

                                                                              aCTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtggtg                                                         <  2:1975199/140‑1 (MQ=255)

                                                                              aCTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtggtg                                                         <  2:1941626/140‑1 (MQ=255)

                                                                              aCTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtggtg                                                         <  2:1427544/140‑1 (MQ=255)

                                                                              aCTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtggtg                                                         <  1:2994986/140‑1 (MQ=255)

                                                                                  gCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGata                                                     <  2:2726672/140‑1 (MQ=255)

                                                                                    tctGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGatata                                                   <  1:1485334/140‑1 (MQ=255)

                                                                                    tctGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGatata                                                   <  1:1724552/140‑1 (MQ=255)

                                                                                       gCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtgg                                                           <  1:2012764/129‑1 (MQ=255)

                                                                                       gCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTtgg                                                           >  2:2012764/1‑129 (MQ=255)

                                                                                       gCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGGTGGTGGATATATgg                                                >  1:1534914/1‑140 (MQ=255)

                                                                                        ccGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGa                                               >  1:2493442/1‑140 (MQ=255)

                                                                                          gTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGAtt                                             <  1:2625198/140‑1 (MQ=255)

                                                                                             ttGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTag                                          <  1:3475117/140‑1 (MQ=255)

                                                                                             ttGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTag                                          <  2:876151/140‑1 (MQ=255)

                                                                                             ttGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTag                                          <  1:2682588/140‑1 (MQ=255)

                                                                                                 tACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAggg                                      <  2:929650/140‑1 (MQ=255)

                                                                                                  aCGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGatatat                                                  <  2:555799/127‑1 (MQ=255)

                                                                                                  aCGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAgggg                                     >  2:3204526/1‑139 (MQ=255)

                                                                                                  aCGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAgggg                                     >  2:606158/1‑139 (MQ=255)

                                                                                                  aCGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGt                                     <  2:2188558/140‑1 (MQ=255)

                                                                                                  aCGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTGTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGt                                     <  2:1098261/140‑1 (MQ=255)

                                                                                                        tttCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAAt                               >  2:2057168/1‑140 (MQ=255)

                                                                                                        tttCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAAt                               >  2:688009/1‑140 (MQ=255)

                                                                                                         ttCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATa                              <  2:153133/140‑1 (MQ=255)

                                                                                                          tCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATaa                             >  1:2809462/1‑140 (MQ=255)

                                                                                                          tCTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATa                              <  2:480119/139‑1 (MQ=255)

                                                                                                           cTGCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATaaa                            <  1:1370176/140‑1 (MQ=255)

                                                                                                             gCGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACa                          >  2:2588015/1‑140 (MQ=255)

                                                                                                              cGGCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACAt                         >  2:327822/1‑140 (MQ=255)

                                                                                                                gCAGGAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATaa                       >  1:2221361/1‑140 (MQ=255)

                                                                                                                   ggAGAAGAAGCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATa                    <  2:2682501/140‑1 (MQ=255)

                                                                                                                       aagaagCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAg                 <  1:2328269/140‑1 (MQ=255)

                                                                                                                         gaagCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGa              <  1:258166/140‑1 (MQ=255)

                                                                                                                          aagCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGAc             <  2:825714/140‑1 (MQ=255)

                                                                                                                          aagCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGAc             <  1:1243165/140‑1 (MQ=255)

                                                                                                                            gCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTGCCGCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACgg           <  1:1067789/140‑1 (MQ=255)

                                                                                                                            gCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACgg           <  1:327822/140‑1 (MQ=255)

                                                                                                                            gCACGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACgg           <  2:1247496/140‑1 (MQ=255)

                                                                                                                              aCGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTa         >  1:2933855/1‑140 (MQ=255)

                                                                                                                               cGTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAc        <  1:514994/140‑1 (MQ=255)

                                                                                                                                gTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc       <  2:2999832/140‑1 (MQ=255)

                                                                                                                                gTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc       <  2:2933855/140‑1 (MQ=255)

                                                                                                                                gTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc       <  1:3451771/140‑1 (MQ=255)

                                                                                                                                gTCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc       <  2:2487530/140‑1 (MQ=255)

                                                                                                                                 tCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGAc             <  1:869093/133‑1 (MQ=255)

                                                                                                                                 tCCGGCAGGACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCt      >  1:464947/1‑140 (MQ=255)

CAACGATAAAAGGCTGTACTTTTTCTTTAGCTCATGGATTAACACAATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCG‑AATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATAT  >  NC_000913/3227755‑3228027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`