Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 339,509 C→T R395R (CGC→CGT yahG → DUF1116 domain‑containing protein YahG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913339,5090CT99.3% 509.9 / NA 148R395R (CGC→CGTyahGDUF1116 domain‑containing protein YahG
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (73/74);  minor base G (1/0);  total (74/74)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 156 total aligned reads displayed.

TCGGGGCTGGATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGCGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGCCCATAA  >  NC_000913/339372‑339643
                                                                                                                                          |                                                                                                                                      
tCGGGGCTGGATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGa                                                                                                                                      >  2:1081774/1‑140 (MQ=255)
 cGGGGCTGGATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGaa                                                                                                                                     >  2:1527463/1‑140 (MQ=255)
        ggATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCAccc                                                                                                                              <  2:3313770/140‑1 (MQ=255)
        ggATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCAccc                                                                                                                              >  1:1450278/1‑140 (MQ=255)
         gATATCGGCGACAGTGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCt                                                                                                                             <  1:2905402/140‑1 (MQ=255)
         gATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCt                                                                                                                             <  2:768207/140‑1 (MQ=255)
         gATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCt                                                                                                                             >  2:2049505/1‑140 (MQ=255)
              cGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTg                                                                                                                        >  2:3090243/1‑140 (MQ=255)
              cGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTg                                                                                                                        >  1:3204052/1‑140 (MQ=255)
              cGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGa                                                                                                                       >  1:1202868/1‑140 (MQ=255)
                gCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGaa                                                                                                                      <  1:2049505/140‑1 (MQ=255)
                 cGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGaaa                                                                                                                     <  1:1096664/140‑1 (MQ=255)
                   aCAGCGCCATCACCGAAACCTACGGTATTGGCGGTTTTGCTCTGGCCGCCCGCCCCCCTCTCTTTGCGCTGGGGGGCTGCACCGAGGAAGTAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAc                                                                                                                   >  2:1273154/1‑140 (MQ=255)
                   aCAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCGCGGTGGAAGAAGCTATTGATTTCTCCCGGCAGATGCGTGAAATCACCCTCGGTGAAAAc                                                                                                                   >  2:2956802/1‑140 (MQ=255)
                   aCAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGa                                                                                                                       <  1:2854810/136‑1 (MQ=255)
                   aCAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAc                                                                                                                   >  2:164778/1‑140 (MQ=255)
                   aCAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAc                                                                                                                   >  2:677133/1‑140 (MQ=255)
                   aCAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAc                                                                                                                   >  1:1544007/1‑140 (MQ=255)
                   aCAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAc                                                                                                                   >  2:2884228/1‑140 (MQ=255)
                   aCAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAc                                                                                                                   <  2:295800/140‑1 (MQ=255)
                    cAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAcc                                                                                                                  <  1:677133/140‑1 (MQ=255)
                    cAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAcc                                                                                                                  <  1:3330258/140‑1 (MQ=255)
                     aGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCCCGCCCGCTATCGTCCCGCTGGGGGGGGGCACGGTGGGAGAAACTATTTTTTTCTCCCCTCAGATGCGTGAAATCACCCCCGGTGTAAAacc                                                                                                                 >  2:3033509/1‑140 (MQ=255)
                       cgcCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAcc                                                                                                                  >  1:876416/1‑137 (MQ=255)
                       cgcCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAAcc                                                                                                                  <  2:876416/137‑1 (MQ=255)
                       cgcCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCaa                                                                                                              <  2:1202868/140‑1 (MQ=255)
                        gcCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCaa                                                                                                              <  1:964780/140‑1 (MQ=255)
                        gcCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCaa                                                                                                              <  1:1527463/140‑1 (MQ=255)
                        gcCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCaa                                                                                                              <  1:3366357/140‑1 (MQ=255)
                         ccATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAAc                                                                                                             <  1:164778/140‑1 (MQ=255)
                         ccATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAAc                                                                                                             >  1:3123881/1‑140 (MQ=255)
                           aTCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGt                                                                                                           <  1:3033509/140‑1 (MQ=255)
                                 gAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGt                                                                                                           <  1:2664706/134‑1 (MQ=255)
                                       tACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCgct                                                                                               >  2:2516510/1‑140 (MQ=255)
                                       tACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCgct                                                                                               >  1:130530/1‑140 (MQ=255)
                                         cGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCgctgc                                                                                             <  2:484148/140‑1 (MQ=255)
                                           gTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTc                                                                                           <  2:1450278/140‑1 (MQ=255)
                                           gTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTc                                                                                           <  2:378605/140‑1 (MQ=255)
                                           gTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTc                                                                                           <  1:3192873/140‑1 (MQ=255)
                                           gTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTc                                                                                           <  1:2772707/140‑1 (MQ=255)
                                           gTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTc                                                                                           <  2:3213393/140‑1 (MQ=255)
                                           gTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTc                                                                                           <  1:2009223/140‑1 (MQ=255)
                                               tGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCgctgc                                                                                             >  2:749662/1‑134 (MQ=255)
                                               tGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCgctgc                                                                                             <  1:749662/134‑1 (MQ=255)
                                               tGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGtt                                                                                       >  2:2199334/1‑140 (MQ=255)
                                                ggCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGttt                                                                                      >  1:383531/1‑140 (MQ=255)
                                                ggCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGttt                                                                                      >  2:2360816/1‑140 (MQ=255)
                                                  cGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTa                                                                                    <  2:2846697/140‑1 (MQ=255)
                                                   ggATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTAt                                                                                   <  1:426340/140‑1 (MQ=255)
                                                      tttGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTa                                                                                    <  1:960138/136‑1 (MQ=255)
                                                      tttGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTa                                                                                    >  2:960138/1‑136 (MQ=255)
                                                      tttGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATggg                                                                                >  2:3262138/1‑140 (MQ=255)
                                                               gCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTg                                                                            <  2:1895044/135‑1 (MQ=255)
                                                               gCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTc                                                                       >  2:2659962/1‑140 (MQ=255)
                                                               gCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTc                                                                       >  1:1989072/1‑140 (MQ=255)
                                                               gCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTc                                                                       >  1:1867205/1‑140 (MQ=255)
                                                               gCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTc                                                                       >  1:860096/1‑140 (MQ=255)
                                                                 cGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCg                                                                      >  1:629539/1‑140 (MQ=255)
                                                                   aCCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGc                                                                    >  1:484409/1‑140 (MQ=255)
                                                                     cgcgCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCaa                                                                  <  2:3204052/140‑1 (MQ=255)
                                                                     cgcgCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCaa                                                                  >  1:1845060/1‑140 (MQ=255)
                                                                     cgcgCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCaa                                                                  <  2:508646/140‑1 (MQ=255)
                                                                     cgcgCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCaa                                                                  <  1:1081774/140‑1 (MQ=255)
                                                                      gcgcCCGCTGTCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAAt                                                                 >  2:1401529/1‑140 (MQ=255)
                                                                       cgcCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATc                                                                <  1:293682/140‑1 (MQ=255)
                                                                         cccGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGa                                                              >  1:2153518/1‑140 (MQ=255)
                                                                         cccGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGa                                                              <  2:2561513/140‑1 (MQ=255)
                                                                             cTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTg                                                                            >  1:94204/1‑122 (MQ=255)
                                                                              tATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCa                                                         <  1:52801/140‑1 (MQ=255)
                                                                              tATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCa                                                         <  1:3262138/140‑1 (MQ=255)
                                                                              tATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCa                                                         <  1:3223276/140‑1 (MQ=255)
                                                                                 cgtcgCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCAccc                                                      <  2:2632029/140‑1 (MQ=255)
                                                                                 cgtcgCGCTGGAGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCAccc                                                      <  2:2769743/140‑1 (MQ=255)
                                                                                        cTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTggg                                               >  1:2680680/1‑140 (MQ=255)
                                                                                                     cGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTagcag                                         >  1:3108992/1‑133 (MQ=255)
                                                                                                     cGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTagcag                                         <  2:3108992/133‑1 (MQ=255)
                                                                                                     cGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCAtt                                  <  1:1914974/140‑1 (MQ=255)
                                                                                                     cGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCAtt                                  >  2:1106601/1‑140 (MQ=255)
                                                                                                        tGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTg                               >  2:1113541/1‑140 (MQ=255)
                                                                                                          gaagaaGCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGcc                             >  2:2924249/1‑140 (MQ=255)
                                                                                                           aagaagCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCg                            <  2:3157222/140‑1 (MQ=255)
                                                                                                             gaagCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGt                          >  2:1093923/1‑140 (MQ=255)
                                                                                                               agCTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGa                        <  2:2153518/140‑1 (MQ=255)
                                                                                                                 cTATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATc                      >  2:1624746/1‑140 (MQ=255)
                                                                                                                  tATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCa                     >  2:3390178/1‑140 (MQ=255)
                                                                                                                  tATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCa                     >  1:1895887/1‑140 (MQ=255)
                                                                                                                  tATTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCa                     >  1:2559105/1‑140 (MQ=255)
                                                                                                                   aTTGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCaa                    <  2:2014697/140‑1 (MQ=255)
                                                                                                                    ttGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAac                   >  1:1425343/1‑140 (MQ=255)
                                                                                                                     tGATTTCTCCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAaca                  <  1:2516510/140‑1 (MQ=255)
                                                                                                                           ctcCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCCTTCTGCCGGTGATCAACACCGCCa            >  2:271250/1‑140 (MQ=255)
                                                                                                                           ctcCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCa            >  1:3269998/1‑140 (MQ=255)
                                                                                                                           ctcCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCa            >  1:3050899/1‑140 (MQ=255)
                                                                                                                            tcCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTTGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCAt           <  2:1981234/140‑1 (MQ=255)
                                                                                                                            tcCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCa            <  2:897600/139‑1 (MQ=255)
                                                                                                                            tcCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCAt           >  2:3376493/1‑140 (MQ=255)
                                                                                                                            tcCCGTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCAt           >  1:2378969/1‑140 (MQ=255)
                                                                                                                                gTCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGcc       <  2:643530/140‑1 (MQ=255)
                                                                                                                                 tCAGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGccc      >  1:2793700/1‑140 (MQ=255)
                                                                                                                                   aGATGCGTGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGCCCAt    <  2:3063082/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                      
TCGGGGCTGGATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGCGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGCCCATAA  >  NC_000913/339372‑339643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: