BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,476,431	A→G	S4P (TCG→CCG)	yheO ←	putative DNA‑binding transcriptional regulator YheO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,476,431	0	A	G	100.0%	730.9 / NA	201	S4P (TCG→CCG)	yheO	putative DNA‑binding transcriptional regulator YheO
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (84/117); total (84/117)

Only 100 of 202 total aligned reads displayed.

TTTCACAGTGGGAGCCAATAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGACCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCACTAATTATATCCGGCCTGTAA  >  NC_000913/3476296‑3476566

    acaGTGGGAGCCAATAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACa                                                                                                                                 <  2:2773132/140‑1 (MQ=255)

      aGTGGGAGCCAATAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATg                                                                                                                               <  2:2246248/140‑1 (MQ=255)

      aGTGGGAGCCAATAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATg                                                                                                                               <  1:3133716/140‑1 (MQ=255)

       gTGGGAGCCAATAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGa                                                                                                                              <  2:1387944/140‑1 (MQ=255)

          ggAGCCAATAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGaaaa                                                                                                                           >  2:1982264/1‑140 (MQ=255)

             gCCAATAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGaaaaaaa                                                                                                                        >  1:235638/1‑140 (MQ=255)

                aaTAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAaca                                                                                                                     >  1:2176749/1‑140 (MQ=255)

                aaTAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAaca                                                                                                                     >  1:3084042/1‑140 (MQ=255)

                 aTAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAacac                                                                                                                    <  1:1368363/140‑1 (MQ=255)

                 aTAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAacac                                                                                                                    <  1:1280722/140‑1 (MQ=255)

                 aTAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAacac                                                                                                                    <  1:561882/140‑1 (MQ=255)

                  tAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACt                                                                                                                   >  1:1216185/1‑140 (MQ=255)

                      cATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCtt                                                                                                               >  1:2296486/1‑140 (MQ=255)

                        tCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCtttt                                                                                                             >  1:2555044/1‑140 (MQ=255)

                         cGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAacac                                                                                                                    <  2:2270374/132‑1 (MQ=255)

                         cGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAacac                                                                                                                    >  1:867495/1‑132 (MQ=255)

                           cTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAg                                                                                                          >  1:542642/1‑140 (MQ=255)

                           cTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAg                                                                                                          >  2:208884/1‑140 (MQ=255)

                               cccGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGc                                                                                                      <  2:1333155/140‑1 (MQ=255)

                               cccGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGc                                                                                                      >  2:134961/1‑140 (MQ=255)

                               cccGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGc                                                                                                      <  2:2733365/140‑1 (MQ=255)

                                  gTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTg                                                                                                   <  2:840171/140‑1 (MQ=255)

                                   tCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAacac                                                                                                                    >  2:1375099/1‑122 (MQ=255)

                                   tCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGt                                                                                                  >  1:2118355/1‑140 (MQ=255)

                                   tCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGt                                                                                                  >  2:289655/1‑140 (MQ=255)

                                   tCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGt                                                                                                  >  1:1753221/1‑140 (MQ=255)

                                   tCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGt                                                                                                  >  1:3002317/1‑140 (MQ=255)

                                    ccaccaCCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTc                                                                                                 <  2:3002317/140‑1 (MQ=255)

                                    ccaccaCCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTc                                                                                                 <  1:2535427/140‑1 (MQ=255)

                                    ccaccaCCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTc                                                                                                 <  1:2276920/140‑1 (MQ=255)

                                         accGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTaa                                                                                            <  1:582957/140‑1 (MQ=255)

                                          ccGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAAc                                                                                           >  2:754552/1‑140 (MQ=255)

                                          ccGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAAc                                                                                           >  2:1751643/1‑140 (MQ=255)

                                             cTTCGTAGGATTTCTGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACttt                                                                                        >  2:1664722/1‑140 (MQ=255)

                                             cTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGc                                                                                                      <  2:3216007/126‑1 (MQ=255)

                                             cTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTaa                                                                                            >  1:2779486/1‑136 (MQ=255)

                                             cTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACttt                                                                                        >  2:1570149/1‑140 (MQ=255)

                                             cTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACttt                                                                                        >  2:3466265/1‑140 (MQ=255)

                                             cTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACttt                                                                                        >  2:535658/1‑140 (MQ=255)

                                             cTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACttt                                                                                        >  1:208044/1‑140 (MQ=255)

                                                   aGGATTTCTGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAggg                                                                                  <  1:1664722/140‑1 (MQ=255)

                                                   aGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAggg                                                                                  <  1:3466265/140‑1 (MQ=255)

                                                   aGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAggg                                                                                  <  1:1146864/140‑1 (MQ=255)

                                                     gATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCa                                                                                <  1:3307142/140‑1 (MQ=255)

                                                     gATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCa                                                                                <  1:1733715/140‑1 (MQ=255)

                                                     gATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCa                                                                                <  2:235638/140‑1 (MQ=255)

                                                     gATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCAGTCGTTAACTTTTCAGGGCa                                                                                <  2:2296486/140‑1 (MQ=255)

                                                      aTTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAg                                                                               <  2:3418282/140‑1 (MQ=255)

                                                       tttCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCTCTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAgg                                                                              <  1:1556123/140‑1 (MQ=255)

                                                       tttCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAgg                                                                              <  2:31321/140‑1 (MQ=255)

                                                       tttCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAgg                                                                              <  1:1379668/140‑1 (MQ=255)

                                                       tttCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAgg                                                                              <  1:289655/140‑1 (MQ=255)

                                                       tttCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAgg                                                                              <  2:542642/140‑1 (MQ=255)

                                                        ttCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAg                                                                               >  2:917629/1‑138 (MQ=255)

                                                        ttCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAg                                                                               <  1:917629/138‑1 (MQ=255)

                                                         tCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCt                                                                            <  2:646811/140‑1 (MQ=255)

                                                         tCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCt                                                                            <  2:806508/140‑1 (MQ=255)

                                                          cAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCt                                                                            >  2:440928/1‑139 (MQ=255)

                                                          cAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCt                                                                            <  1:53862/139‑1 (MQ=255)

                                                          cAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTc                                                                           >  2:2803859/1‑140 (MQ=255)

                                                             aaTATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGc                                                                                 <  1:3056033/131‑1 (MQ=255)

                                                                atCAAAATTGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAat                                                                     >  1:1075412/1‑140 (MQ=255)

                                                                atCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAGTCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAat                                                                     >  2:469250/1‑140 (MQ=255)

                                                                  cAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAatga                                                                   <  2:3264591/140‑1 (MQ=255)

                                                                    aaaTCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAatgatg                                                                 <  2:2623510/140‑1 (MQ=255)

                                                                          gTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTa                                                           <  2:1864253/140‑1 (MQ=255)

                                                                          gTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTa                                                           >  1:2599579/1‑140 (MQ=255)

                                                                          gTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTa                                                           <  2:2453135/140‑1 (MQ=255)

                                                                            cTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAAc                                                         <  1:1006212/140‑1 (MQ=255)

                                                                            cTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAAc                                                         <  1:1814638/140‑1 (MQ=255)

                                                                            cTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAAc                                                         <  2:584988/140‑1 (MQ=255)

                                                                            cTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAAc                                                         <  2:144557/140‑1 (MQ=255)

                                                                                    aaGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTaa                                                 <  1:3428646/140‑1 (MQ=255)

                                                                                         cGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAg                                            >  2:778168/1‑140 (MQ=255)

                                                                                          gTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGc                                           >  2:1130657/1‑140 (MQ=255)

                                                                                              aTCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAg                                       >  1:3096394/1‑140 (MQ=255)

                                                                                              aTCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAg                                       >  2:3360991/1‑140 (MQ=255)

                                                                                                ccAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATG‑AAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGtt                                    <  1:3232473/140‑1 (MQ=255)

                                                                                                 cAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGtt                                    >  2:1010642/1‑140 (MQ=255)

                                                                                                    tAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCg                                 <  2:2540529/140‑1 (MQ=255)

                                                                                                    tAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCg                                 <  1:2267295/140‑1 (MQ=255)

                                                                                                        tCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCg                                 <  2:1782488/136‑1 (MQ=255)

                                                                                                        tCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCttt                             >  1:3355039/1‑140 (MQ=255)

                                                                                                        tCCAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCttt                             >  1:981805/1‑140 (MQ=255)

                                                                                                          cAACTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTcc                           <  2:3084042/140‑1 (MQ=255)

                                                                                                            aCTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAg                         <  1:778168/140‑1 (MQ=255)

                                                                                                             cTCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCgg                                         <  1:510521/123‑1 (MQ=255)

                                                                                                              tCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCa                       <  1:2496006/140‑1 (MQ=255)

                                                                                                              tCACTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCa                       <  2:1075412/140‑1 (MQ=255)

                                                                                                                aCTGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTcc                           >  1:952683/1‑134 (MQ=255)

                                                                                                                  tGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTcc                           <  1:742821/132‑1 (MQ=255)

                                                                                                                  tGGTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTcc                           >  2:742821/1‑132 (MQ=255)

                                                                                                                   ggTTTCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCACTAAt                  <  2:2176749/140‑1 (MQ=255)

                                                                                                                     tttCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCAc                      <  1:2854214/134‑1 (MQ=255)

                                                                                                                     tttCGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCAc                      >  2:1162113/1‑134 (MQ=255)

                                                                                                                        cGTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCACTAATTatat             <  2:3010426/140‑1 (MQ=255)

                                                                                                                         gTTGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCACTAATTATATc            <  1:1926363/140‑1 (MQ=255)

                                                                                                                          ttGGTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCACTAATTATATcc           >  2:3331331/1‑140 (MQ=255)

                                                                                                                             gTTAAAAGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCACTAATTATATCCGGc        <  1:754552/140‑1 (MQ=255)

                                                                                                                                   aGCGGCCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCACTAATTATATCCGGCCTGtaa  >  1:1686937/1‑140 (MQ=255)

TTTCACAGTGGGAGCCAATAAGCATCGCTAACCCGTCCACCACCGCTTCGTAGGATTTCAGAATATCAAAATCGGTCTGGTCGAAAGGACGTTGATCCAGTAAATCCAACTCACTGGTTTCGTTGGTTAAAAGCGACCTGGACATGAAAAAAAACACTCCTTTTCAGGAGCCTGTCGTTAACTTTTCAGGGCAGGCTCATTAATGATGCGGGTAACTAAATTAATACAGCGGAGGTTCCGCTTTCCAGCACTAATTATATCCGGCCTGTAA  >  NC_000913/3476296‑3476566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`