BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,532,985	C→T	A56A (GCC→GCT)	pck →	phosphoenolpyruvate carboxykinase (ATP)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,532,985	0	C	T	100.0%	973.5 / NA	268	A56A (GCC→GCT)	pck	phosphoenolpyruvate carboxykinase (ATP)
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (125/143); total (125/143)

Only 100 of 277 total aligned reads displayed.

AACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCCGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACCTCTCTCTCCGGAAA  >  NC_000913/3532849‑3533118

aaCTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTc                                                                                                                                    <  1:3099350/140‑1 (MQ=255)

    cGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGTCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATa                                                                                                                                <  2:403436/140‑1 (MQ=255)

          ttATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCTAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGa                                                                                                                          <  2:3228993/140‑1 (MQ=255)

          ttATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGa                                                                                                                          <  1:2502281/140‑1 (MQ=255)

             tGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCt                                                                                                                       >  2:1362319/1‑140 (MQ=255)

                  tCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCAcc                                                                                                                  >  1:3184167/1‑140 (MQ=255)

                  tCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCAcc                                                                                                                  >  2:172802/1‑140 (MQ=255)

                    aGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCgg                                                                                                                >  2:1506000/1‑140 (MQ=255)

                      tGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTc                                                                                                              >  2:2590336/1‑140 (MQ=255)

                      tGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTc                                                                                                              >  1:2208191/1‑140 (MQ=255)

                          gaaCATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGCAAGAGCTCAATCCGAGCCTGACAGGTTATGAGCGCGGGGAGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTc                                                                                                          >  2:3209023/3‑140 (MQ=255)

                          gTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTc                                                                                                          <  1:1506000/140‑1 (MQ=255)

                          gTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTc                                                                                                          >  2:1745159/1‑140 (MQ=255)

                            aCATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCAc                                                                                                        <  2:205955/140‑1 (MQ=255)

                             cATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCAcc                                                                                                       >  1:3046960/1‑140 (MQ=255)

                             cATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCAcc                                                                                                       <  1:32120/140‑1 (MQ=255)

                             cATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCAcc                                                                                                       >  2:586621/1‑140 (MQ=255)

                               tGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaa                                                                                                     <  2:1625244/140‑1 (MQ=255)

                               tGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaa                                                                                                     <  1:618079/140‑1 (MQ=255)

                                gATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCg                                                                                                             >  1:2157119/1‑131 (MQ=255)

                                gATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaaa                                                                                                    <  2:454572/140‑1 (MQ=255)

                                 atatCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaaaa                                                                                                   <  2:2170332/140‑1 (MQ=255)

                                 atatCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaaaa                                                                                                   <  1:1980830/140‑1 (MQ=255)

                                 atatCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaaaa                                                                                                   <  2:2208191/140‑1 (MQ=255)

                                 atatCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaaaa                                                                                                   <  1:1786637/140‑1 (MQ=255)

                                  tatCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAg                                                                                                  >  1:326255/1‑140 (MQ=255)

                                   atCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGa                                                                                                 <  1:2590336/140‑1 (MQ=255)

                                   atCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGa                                                                                                 <  2:2735259/140‑1 (MQ=255)

                                   atCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGa                                                                                                 <  1:1797374/140‑1 (MQ=255)

                                     cGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATa                                                                                               <  1:891249/140‑1 (MQ=255)

                                      gTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACAGGTCGTTCACCAAAAGATaa                                                                                              <  1:383083/140‑1 (MQ=255)

                                       tttACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCAcc                                                                                                       <  2:3342514/130‑1 (MQ=255)

                                       tttACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaaaa                                                                                                   >  1:1918614/1‑134 (MQ=255)

                                       tttACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATa                                                                                               >  2:2276669/1‑138 (MQ=255)

                                       tttACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAg                                                                                             >  2:920588/1‑140 (MQ=255)

                                       tttACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAg                                                                                             <  2:3158957/140‑1 (MQ=255)

                                       tttACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAg                                                                                             <  2:370905/140‑1 (MQ=255)

                                         tACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaaaa                                                                                                   >  1:3379174/1‑132 (MQ=255)

                                          aCAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCaaaa                                                                                                   <  2:2997508/131‑1 (MQ=255)

                                          aCAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGtat                                                                                          <  1:1362319/140‑1 (MQ=255)

                                               ccAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATa                                                                                               <  2:2510473/130‑1 (MQ=255)

                                                cAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTc                                                                                    <  1:1660039/140‑1 (MQ=255)

                                                 aaGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCAGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTcc                                                                                   >  2:80403/1‑140 (MQ=255)

                                                  aGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCg                                                                                  <  2:2132963/140‑1 (MQ=255)

                                                   gCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGt                                                                                 <  1:1745159/140‑1 (MQ=255)

                                                     tACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGa                                                                               <  2:1258165/140‑1 (MQ=255)

                                                        gACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGa                                                                            >  1:2832388/1‑140 (MQ=255)

                                                            tgctgTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGt                                                                                 <  1:1335195/131‑1 (MQ=255)

                                                               tgTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAGAGATAAGTATATCGTCCGTGACGATACCACt                                                                     <  1:2065931/140‑1 (MQ=255)

                                                                   tCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTcgcg                                                                 >  1:1576632/1‑140 (MQ=255)

                                                                   tCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTcgcg                                                                 <  2:1088762/140‑1 (MQ=255)

                                                                   tCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTcgcg                                                                 <  2:472840/140‑1 (MQ=255)

                                                                        aaGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACt                                                                     >  1:2901730/1‑131 (MQ=255)

                                                                        aaGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACt                                                            >  1:265975/1‑140 (MQ=255)

                                                                        aaGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACt                                                            >  1:3159335/1‑140 (MQ=255)

                                                                           agCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTc                                                         >  2:1863649/1‑140 (MQ=255)

                                                                           agCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTc                                                         >  1:1041706/1‑140 (MQ=255)

                                                                           agCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTc                                                         >  1:913546/1‑140 (MQ=255)

                                                                             cTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATAcc                                                                        <  2:1438701/123‑1 (MQ=255)

                                                                             cTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATAcc                                                                        >  1:1438701/1‑123 (MQ=255)

                                                                             cTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTcgcg                                                                 >  2:943395/1‑130 (MQ=255)

                                                                             cTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCtg                                                       >  2:1019363/1‑140 (MQ=255)

                                                                             cTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCtg                                                       >  2:132393/1‑140 (MQ=255)

                                                                             cTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCtg                                                       >  1:938698/1‑140 (MQ=255)

                                                                                  tCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTggg                                                  <  2:1940034/140‑1 (MQ=255)

                                                                                  tCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTggg                                                  <  2:171835/140‑1 (MQ=255)

                                                                                  tCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTggg                                                  <  1:1863649/140‑1 (MQ=255)

                                                                                      aGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCt                                                        >  2:2432132/1‑130 (MQ=255)

                                                                                       gCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAc                                             >  1:1178502/1‑140 (MQ=255)

                                                                                       gCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAc                                             <  2:2543777/140‑1 (MQ=255)

                                                                                       gCCTGACAGGTTATGAGCGCGGGGTATTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAc                                             <  2:179168/140‑1 (MQ=255)

                                                                                        ccTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAca                                            <  1:849496/140‑1 (MQ=255)

                                                                                        ccTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAca                                            <  1:2853087/140‑1 (MQ=255)

                                                                                          tGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAcaaa                                          <  1:2248881/140‑1 (MQ=255)

                                                                                           gACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAcaaag                                         >  1:3450182/1‑140 (MQ=255)

                                                                                            aCAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAca                                            >  2:638460/1‑136 (MQ=255)

                                                                                             cAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAcaaaggc                                       <  2:27980/140‑1 (MQ=255)

                                                                                                 ttATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAcaaaggcaaag                                   >  2:3305683/1‑140 (MQ=255)

                                                                                                    tGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTa                                <  2:2844604/140‑1 (MQ=255)

                                                                                                     gAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTaa                               >  2:1121877/1‑140 (MQ=255)

                                                                                                      aGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTa                                <  2:3424195/138‑1 (MQ=255)

                                                                                                      aGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAg                              <  2:1530821/140‑1 (MQ=255)

                                                                                                         gcgGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAAc                           <  1:2745838/140‑1 (MQ=255)

                                                                                                         gcgGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAAc                           <  1:2184809/140‑1 (MQ=255)

                                                                                                          cgGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACg                          >  2:1949326/1‑140 (MQ=255)

                                                                                                          cgGGGTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACg                          >  2:3056468/1‑140 (MQ=255)

                                                                                                           ggggTGTTAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAcaaaggcaa                                     <  1:944454/128‑1 (MQ=255)

                                                                                                                  tAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAcaaaggcaaag                                   <  2:1712464/123‑1 (MQ=255)

                                                                                                                  tAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGAcaaaggcaaag                                   >  1:1712464/1‑123 (MQ=255)

                                                                                                                  tAACTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACaaa                  <  1:172802/140‑1 (MQ=255)

                                                                                                                     cTAATCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACct               <  1:1282124/140‑1 (MQ=255)

                                                                                                                        aTCTGGGTGCCGTTGCTGTCGATACCAGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACctctc            <  1:80403/140‑1 (MQ=255)

                                                                                                                         tCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACctctct           >  2:3083385/1‑140 (MQ=255)

                                                                                                                         tCTGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACct               <  2:288706/136‑1 (MQ=255)

                                                                                                                           tGGGTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACctctctct         >  1:2795405/1‑140 (MQ=255)

                                                                                                                             ggTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACctctc            >  1:2388593/1‑135 (MQ=255)

                                                                                                                             ggTGCCGTTGCTGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACCTCTCTCTcc       >  1:462596/1‑140 (MQ=255)

                                                                                                                               tgccgttgctgtCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACCTCTCTCTCCgg     >  2:2822358/1‑140 (MQ=255)

                                                                                                                                  cgttgctgtCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACCTCTCTCTCCGGaaa  <  2:857816/140‑1 (MQ=255)

                                                                                                                                  cgttgctgtCGATACCGGGATCTTCACCGGTCGTTCACAAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACCTCTCTCTCCGGaaa  >  1:1011334/1‑140 (MQ=255)

AACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCCGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACCTCTCTCTCCGGAAA  >  NC_000913/3532849‑3533118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`