Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,550,076 T→C intergenic (‑6/+4) malQ ← / ← malP 4‑alpha‑glucanotransferase/maltodextrin phosphorylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,550,0760TC100.0% 577.8 / NA 159intergenic (‑6/+4)malQ/malP4‑alpha‑glucanotransferase/maltodextrin phosphorylase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (76/83);  total (76/83)

Only 100 of 165 total aligned reads displayed.

TGATGCATCGCGTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCTTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGTACAGCACATCCAC  >  NC_000913/3549943‑3550211
                                                                                                                                     |                                                                                                                                       
tGATGCATCGCGTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTa                                                                                                                                   >  1:3371670/1‑140 (MQ=255)
  aTGCATCGCGTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGcctcct                                                                                                                                     >  2:1841282/1‑136 (MQ=255)
  aTGCATCGCGTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGc                                                                                                                                 >  2:2738850/1‑140 (MQ=255)
     cATCGCGTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGtt                                                                                                                              >  1:2689656/1‑140 (MQ=255)
       tCGCGTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGtttt                                                                                                                            >  1:3201870/1‑140 (MQ=255)
       tCGCGTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCACCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGtttt                                                                                                                            >  2:403104/1‑140 (MQ=255)
        cgcgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtg                                                                                                                           >  2:2874552/1‑140 (MQ=255)
        cgcgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtg                                                                                                                           >  1:1589297/1‑140 (MQ=255)
         gcgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgc                                                                                                                          >  1:3075189/1‑140 (MQ=255)
         gcgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgc                                                                                                                          >  2:339698/1‑140 (MQ=255)
         gcgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgc                                                                                                                          >  1:267047/1‑140 (MQ=255)
          cgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGcctcct                                                                                                                                     >  1:2370504/1‑128 (MQ=255)
          cgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGcctcct                                                                                                                                     <  2:2370504/128‑1 (MQ=255)
          cgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgcc                                                                                                                         >  1:2532810/1‑140 (MQ=255)
          cgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgcc                                                                                                                         >  2:1416228/1‑140 (MQ=255)
          cgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgcc                                                                                                                         >  1:922239/1‑140 (MQ=255)
          cgTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTCCCATCGAGCCTCCTTAGCGTTTtgcc                                                                                                                         >  1:3005409/1‑140 (MQ=255)
           gTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgcct                                                                                                                        <  2:2736731/140‑1 (MQ=255)
             cAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgcctgc                                                                                                                      <  2:3258359/140‑1 (MQ=255)
              aaGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgcctgcc                                                                                                                     <  2:1589297/140‑1 (MQ=255)
              aaGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTtgcctgcc                                                                                                                     <  2:2075092/140‑1 (MQ=255)
               aGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCa                                                                                                                    >  2:3067885/1‑140 (MQ=255)
                   aaCGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATa                                                                                                                <  1:2738850/140‑1 (MQ=255)
                   aaCGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATa                                                                                                                <  1:2874552/140‑1 (MQ=255)
                    aCGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATAc                                                                                                               >  1:2310000/1‑140 (MQ=255)
                     cGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACg                                                                                                              <  1:106402/140‑1 (MQ=255)
                       ccGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAg                                                                                                            <  1:2357049/140‑1 (MQ=255)
                          tttGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCt                                                                                                         >  1:965407/1‑140 (MQ=255)
                            tGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGa                                                                                                       <  2:302794/140‑1 (MQ=255)
                            tGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGa                                                                                                       <  2:3381418/140‑1 (MQ=255)
                                    gcgcTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATcgcg                                                                                               >  1:1754546/1‑140 (MQ=255)
                                    gcgcTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATcgcg                                                                                               <  1:3067885/140‑1 (MQ=255)
                                     cgcTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGa                                                                                              <  1:1078212/140‑1 (MQ=255)
                                               cTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCACCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGAt                                                                                    <  1:403104/140‑1 (MQ=255)
                                                 gCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATcc                                                                                  <  1:3253311/140‑1 (MQ=255)
                                                  cGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCg                                                                                 >  1:3392435/1‑140 (MQ=255)
                                                    gTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAg                                                                               <  2:1441048/140‑1 (MQ=255)
                                                    gTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAg                                                                               <  2:253615/140‑1 (MQ=255)
                                                    gTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAg                                                                               >  1:3131863/1‑140 (MQ=255)
                                                            tGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATcc                                                                                  <  2:1228991/129‑1 (MQ=255)
                                                            tGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACAt                                                                       >  1:1564149/1‑140 (MQ=255)
                                                              ggCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATcc                                                                                  <  2:384847/127‑1 (MQ=255)
                                                              ggCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATcc                                                                                  <  2:847550/127‑1 (MQ=255)
                                                              ggCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATAc                                                                     >  2:902490/1‑140 (MQ=255)
                                                                   tGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCt                                                                             >  1:2254823/1‑127 (MQ=255)
                                                                   tGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAg                                                                >  2:693197/1‑140 (MQ=255)
                                                                   tGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAg                                                                >  1:1189154/1‑140 (MQ=255)
                                                                   tGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGACCGATCCGAGCt                                                                             <  2:2254823/127‑1 (MQ=255)
                                                                     aTGTAATTGGGGCTAATCCCCGCCGNCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcg                                                              >  2:2472634/1‑140 (MQ=255)
                                                                       gTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            <  2:943081/140‑1 (MQ=255)
                                                                       gTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            <  2:2962129/140‑1 (MQ=255)
                                                                       gTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            <  2:1754546/140‑1 (MQ=255)
                                                                       gTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            <  1:2281097/140‑1 (MQ=255)
                                                                       gTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            <  1:3456669/140‑1 (MQ=255)
                                                                       gTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            <  1:394938/140‑1 (MQ=255)
                                                                       gTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTACCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            <  2:2242560/140‑1 (MQ=255)
                                                                       gTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTACCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            <  2:3241310/140‑1 (MQ=255)
                                                                        tAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATAcc                                                                    >  1:1481051/1‑131 (MQ=255)
                                                                        tAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATAcc                                                                    <  2:3121540/131‑1 (MQ=255)
                                                                        tAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATAcc                                                                    <  2:1481051/131‑1 (MQ=255)
                                                                        tAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcgggc                                                           >  1:2495739/1‑140 (MQ=255)
                                                                        tAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            >  2:2498823/1‑139 (MQ=255)
                                                                          aTTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcgggcgg                                                         <  1:1434233/140‑1 (MQ=255)
                                                                          aTTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcgggcgg                                                         >  2:3340770/1‑140 (MQ=255)
                                                                            tGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTa                                                       <  1:1466500/140‑1 (MQ=255)
                                                                            tGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTa                                                       <  1:1713938/140‑1 (MQ=255)
                                                                             ggggCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTAt                                                      >  2:560830/1‑140 (MQ=255)
                                                                              gggCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTAtt                                                     >  1:1195928/1‑140 (MQ=255)
                                                                               ggCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCa                                                                 <  1:1369466/127‑1 (MQ=255)
                                                                               ggCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTg                                                    >  1:1382592/1‑140 (MQ=255)
                                                                               ggCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTg                                                    >  2:2095764/1‑140 (MQ=255)
                                                                               ggCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTg                                                    >  1:663401/1‑140 (MQ=255)
                                                                               ggCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTg                                                    >  2:1897909/1‑140 (MQ=255)
                                                                                gCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAgcggg                                                            >  2:2327649/1‑131 (MQ=255)
                                                                                gCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGa                                                   <  2:228193/140‑1 (MQ=255)
                                                                                    aTCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTa                                                       <  1:2015754/132‑1 (MQ=255)
                                                                                    aTCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGAt                                               >  1:2940216/1‑140 (MQ=255)
                                                                                    aTCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGAt                                               >  2:1241393/1‑140 (MQ=255)
                                                                                    aTCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGAt                                               <  2:2495739/140‑1 (MQ=255)
                                                                                           ccgccAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCcgcg                                        <  1:2106310/140‑1 (MQ=255)
                                                                                            cgccAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCcgcgc                                       <  1:3340770/140‑1 (MQ=255)
                                                                                              ccAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGa                                     >  2:1133173/1‑140 (MQ=255)
                                                                                               cAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAg                                    >  2:1324237/1‑140 (MQ=255)
                                                                                                aGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGatt                                   <  2:1657507/140‑3 (MQ=255)
                                                                                                 gcgcGGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTc                                  >  2:10900/1‑140 (MQ=255)
                                                                                                   gcgGCATTATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCa                                <  2:2940216/140‑1 (MQ=255)
                                                                                                         ttATCCAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGcctc                          <  2:668910/140‑1 (MQ=255)
                                                                                                              cAGACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGt                     <  1:1895509/140‑1 (MQ=255)
                                                                                                                gACGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTcg                   <  1:79111/140‑1 (MQ=255)
                                                                                                                 aCGTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTcgc                  >  1:475753/1‑140 (MQ=255)
                                                                                                                   gTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCgg                <  1:2472634/140‑1 (MQ=255)
                                                                                                                   gTTTGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCgg                <  1:1239119/140‑1 (MQ=255)
                                                                                                                    tttGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGt               >  2:895190/1‑140 (MQ=255)
                                                                                                                      tGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGTAc             >  2:2135974/1‑140 (MQ=255)
                                                                                                                      tGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGTAc             >  2:40386/1‑140 (MQ=255)
                                                                                                                      tGCTTTCCATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGTAc             >  1:949124/1‑140 (MQ=255)
                                                                                                                             cATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGTACAGCACAt      <  1:489798/140‑1 (MQ=255)
                                                                                                                             cATCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGTACAGCACAt      <  1:895190/140‑1 (MQ=255)
                                                                                                                               tCGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGTACAGCACATcc    >  1:730628/1‑140 (MQ=255)
                                                                                                                                cGAGCCTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGTACAGCACATCCa   <  2:1382592/140‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                       
TGATGCATCGCGTCAAGCAAACGCCGTTTGGTTTCGGCGCTAATCGACTGCGGTTTACCGTGGGCATTGATGTAATTGGGGCTAATCCCCGCCGCCAGCGCGGCATTATCCAGACGTTTGCTTTCCATCGAGCTTCCTTAGCGTTTTGCCTGCCAGATACGAGCCTGATAATCGCGAATAGAGCGATCCGAGCTAAACATACCGCAGCGGGCGGTATTGAGGATCGCCGCGCGAGTCCAGGCCTCCTGGTCGCGGTACAGCACATCCAC  >  NC_000913/3549943‑3550211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑