BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,779,230	Δ1 bp	coding (72/912 nt)	ydiP ←	putative DNA‑binding transcriptional regulator YdiP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,779,227	0	A	.	100.0%	479.0 / NA	112	coding (75/912 nt)	ydiP	putative DNA‑binding transcriptional regulator YdiP
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (56/56); total (56/56)

Only 100 of 116 total aligned reads displayed.

CCACAATGTCATCCGCATGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGCAAAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTG  >  NC_000913/1779088‑1779361

ccacAATGTCATCCGCATGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGCa                                                                                                                                        <  2:420682/140‑1 (MQ=255)

   caATGTCATCCGCATGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGCaaac                                                                                                                                     >  1:614042/1‑139 (MQ=255)

      tGTCATCCGCATGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGCaaacgtg                                                                                                                                  >  2:1216216/1‑136 (MQ=255)

       gTCATCCGCATGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGa                                                                                                                                <  2:441315/140‑1 (MQ=255)

           tCCGCATGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGc                                                                                                                            >  1:103311/1‑140 (MQ=255)

           tCCGCATGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGc                                                                                                                            >  2:1321692/1‑140 (MQ=255)

              gCATGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGt                                                                                                                         <  1:1104561/140‑1 (MQ=255)

                aTGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTgg                                                                                                                       <  2:351382/140‑1 (MQ=255)

                 tgtgCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGc                                                                                                                      >  2:217897/1‑140 (MQ=255)

                     cGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGttt                                                                                                                  >  1:831158/1‑140 (MQ=255)

                     cGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGttt                                                                                                                  >  1:293425/1‑140 (MQ=255)

                                  agaaTCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCg                                                                                                             <  1:293380/132‑1 (MQ=255)

                                  agaaTCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACaaa                                                                                                     >  2:286586/1‑140 (MQ=255)

                                  agaaTCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACaaa                                                                                                     >  2:17189/1‑140 (MQ=255)

                                  agaaTCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACaaa                                                                                                     >  2:1316182/1‑140 (MQ=255)

                                  agaaTCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACaaa                                                                                                     >  1:582292/1‑140 (MQ=255)

                                    aaTCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAACGCCGTGGCGATCTACCGGCGACAAACa                                                                                                   >  1:223515/1‑140 (MQ=255)

                                    aaTCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTAc                                                                                                               <  2:1335743/128‑1 (MQ=255)

                                    aaTCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTAc                                                                                                               >  1:1335743/1‑128 (MQ=255)

                                    aaTCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACa                                                                                                   >  2:1054285/1‑140 (MQ=255)

                                       cGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCg                                                                                                <  2:185954/140‑1 (MQ=255)

                                            gTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCa                                                                                           <  2:293425/140‑1 (MQ=255)

                                              aaaCCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACt                                                                                         >  2:740118/1‑140 (MQ=255)

                                                aCCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTgg                                                                                       >  2:151264/1‑140 (MQ=255)

                                                 ccTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGc                                                                                      <  2:1256567/140‑1 (MQ=255)

                                                 ccTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGc                                                                                      >  2:1102945/1‑140 (MQ=255)

                                                 ccTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGc                                                                                      <  2:614042/140‑1 (MQ=255)

                                                    tGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGt                                                                                               >  1:1140973/1‑128 (MQ=255)

                                                    tGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGt                                                                                               <  2:1140973/128‑1 (MQ=255)

                                                    tGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGtt                                                                                   >  1:1003905/1‑140 (MQ=255)

                                                    tGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGtt                                                                                   >  2:43188/1‑140 (MQ=255)

                                                    tGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGtt                                                                                   >  2:517383/1‑140 (MQ=255)

                                                    tGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGtt                                                                                   >  2:40634/1‑140 (MQ=255)

                                                    tGCAACCCCTTGCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGtt                                                                                   >  1:585803/1‑140 (MQ=255)

                                                      cAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTAt                                                                                 >  2:629525/1‑140 (MQ=255)

                                                      cAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTAt                                                                                 >  1:1253990/1‑140 (MQ=255)

                                                      cAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTAt                                                                                 >  1:110903/1‑140 (MQ=255)

                                                           ccTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCaaaa                                                                            >  2:35618/1‑140 (MQ=255)

                                                           ccTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCaaaa                                                                            <  2:103311/140‑1 (MQ=255)

                                                           ccTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCaa                                                                              >  1:1339692/1‑138 (MQ=255)

                                                            cTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAAc                                                                           >  2:865875/1‑140 (MQ=255)

                                                            cTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAAc                                                                           >  2:459648/1‑140 (MQ=255)

                                                             tttCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACa                                                                          <  1:17189/140‑1 (MQ=255)

                                                              ttCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAg                                                                         <  1:1216216/140‑1 (MQ=255)

                                                                cTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCg                                                                       <  1:517383/140‑1 (MQ=255)

                                                                 ttGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGt                                                                      >  2:1252665/1‑140 (MQ=255)

                                                                 ttGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGt                                                                      <  1:132432/140‑1 (MQ=255)

                                                                 ttGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGt                                                                      <  1:865875/140‑1 (MQ=255)

                                                                  tGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGtt                                                                     <  1:1054285/140‑1 (MQ=255)

                                                                    aCGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGa                                                                   <  1:629525/140‑1 (MQ=255)

                                                                      gTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATa                                                                 <  2:1009622/140‑1 (MQ=255)

                                                                       tAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATAc                                                                <  1:281624/140‑1 (MQ=255)

                                                                         aaTCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACAt                                                              >  1:954451/1‑140 (MQ=255)

                                                                          aTCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGt                                                                      >  2:630390/1‑131 (MQ=255)

                                                                          aTCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGt                                                                      <  1:630390/131‑1 (MQ=255)

                                                                            cAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGAc                                                           <  2:1119758/140‑1 (MQ=255)

                                                                              aCTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACaa                                                         <  1:1215689/140‑1 (MQ=255)

                                                                              aCTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACaa                                                         <  1:217897/140‑1 (MQ=255)

                                                                              aCTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACaa                                                         <  2:585803/140‑1 (MQ=255)

                                                                              aCTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACaa                                                         <  1:740118/140‑1 (MQ=255)

                                                                               cTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAAc                                                        >  1:120542/1‑140 (MQ=255)

                                                                               cTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAAc                                                        <  2:120542/140‑1 (MQ=255)

                                                                               cTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAAc                                                        >  2:1310586/1‑140 (MQ=255)

                                                                                tCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTTGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACAt                                                              <  2:953946/133‑1 (MQ=255)

                                                                                tCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTTGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACAt                                                              >  1:953946/1‑133 (MQ=255)

                                                                                tCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAAcc                                                       <  2:128885/140‑1 (MQ=255)

                                                                                   gTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTcc                                                    >  2:694034/1‑140 (MQ=255)

                                                                                     ttCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCt                                                  <  1:459648/140‑1 (MQ=255)

                                                                                     ttCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCt                                                  <  2:110903/140‑1 (MQ=255)

                                                                                             cATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATg                                          >  2:1059910/1‑140 (MQ=255)

                                                                                              aTGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGa                                         >  2:1147195/1‑140 (MQ=255)

                                                                                              aTGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGa                                         >  2:1185175/1‑140 (MQ=255)

                                                                                              aTGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGa                                         >  1:593701/1‑140 (MQ=255)

                                                                                               tGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGag                                        <  2:247118/140‑1 (MQ=255)

                                                                                               tGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGag                                        <  1:1307312/140‑1 (MQ=255)

                                                                                                 aaCGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCCCCCTATTCCATGag                                        <  1:677418/138‑1 (MQ=255)

                                                                                                    gTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGagcaagc                                   <  2:897864/140‑1 (MQ=255)

                                                                                                      gATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAgcaagcaa                                 >  1:31537/1‑140 (MQ=255)

                                                                                                      gATGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGCGAAAGCCGTGGTGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAgcaagcaa                                 >  1:1179651/1‑140 (MQ=255)

                                                                                                        tGTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCaaaa                               <  1:412679/140‑1 (MQ=255)

                                                                                                         gTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCaaaaa                              <  1:428739/140‑1 (MQ=255)

                                                                                                         gTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCaaaaa                              <  1:735002/140‑1 (MQ=255)

                                                                                                         gTCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCaaaaa                              <  1:286586/140‑1 (MQ=255)

                                                                                                          tCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGagcaagca                                  >  2:528984/1‑135 (MQ=255)

                                                                                                          tCCGGACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGagcaagca                                  <  1:528984/135‑1 (MQ=255)

                                                                                                              gACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAata                         >  1:395671/1‑140 (MQ=255)

                                                                                                              gACTCCCATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAata                         >  1:343007/1‑140 (MQ=255)

                                                                                                                  cccATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATg                     <  2:595385/140‑1 (MQ=255)

                                                                                                                  cccATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATg                     <  2:761822/140‑1 (MQ=255)

                                                                                                                   ccATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGc                    <  1:354189/140‑1 (MQ=255)

                                                                                                                    cATTTTGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGcc                   <  2:593701/140‑1 (MQ=255)

                                                                                                                         tGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATg                     <  2:38725/133‑1 (MQ=255)

                                                                                                                         tGGATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATg                     >  1:38725/1‑133 (MQ=255)

                                                                                                                           gATCATCGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGCCGGATaaa            >  1:303173/1‑140 (MQ=255)

                                                                                                                               atcGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATa         >  1:1253483/1‑139 (MQ=255)

                                                                                                                               atcGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATa         <  2:1253483/139‑1 (MQ=255)

                                                                                                                               atcGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATAc        >  1:375731/1‑140 (MQ=255)

                                                                                                                                tcGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATg                     >  2:1198258/1‑126 (MQ=255)

                                                                                                                                tcGCTAAATGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACg       >  2:379213/1‑140 (MQ=255)

                                                                                                                                     aaaTGC‑AAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCgtg  <  2:31537/140‑1 (MQ=255)

CCACAATGTCATCCGCATGTGCGACATATAACGAAGAATCGATGGTAAACCTTGCAACCCCTTTCTTGACGTAAATCAACTCGGTTTCATTGTCATGAACGTGATGTCCGGACTCCCATTTTGGATCATCGCTAAATGCAAAACGTGAAAGCCGTGGCGTTTTACCGGCGACAAACAGCGTTTCACTGGCGTTATCAAAACAGCGTTGATACATGACAACCTCCCTATTCCATGAGCAAGCAAAAACAATATATGCCGGATAAAATACGGCGTG  >  NC_000913/1779088‑1779361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`