BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3363001 =	88 (1.150)	117 (1.540)	64/272	0.1	72.1%	coding (195/2382 nt)	yhcD	putative fimbrial usher protein YhcD
*	?	NC_000913	3766087 =	3 (0.040)	117 (1.540)	64/272	0.1	72.1%	coding (3905/4134 nt)	rhsA	rhs element protein RhsA

Only 100 of 118 total aligned reads displayed.

ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3363140‑3363001

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTG  >  NC_000913/3766087‑3766224

ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACT                                                                                                                                            <  2:972165/140‑1

 CAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           <  1:41056/140‑1

 CAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           <  1:1289871/140‑1

 CAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           <  1:841074/140‑1

    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGA                                                                                                                                        <  1:142717/140‑1

    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGA                                                                                                                                        >  2:146237/1‑140

    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGA                                                                                                                                        <  1:999253/140‑1

    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGA                                                                                                                                        <  1:1071019/140‑1

    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGA                                                                                                                                        >  1:1267216/1‑140

    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           >  2:1194890/1‑137

    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           >  2:1151514/1‑137

    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           <  1:1151514/137‑1

    TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           <  1:1194890/137‑1

     ATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGAT                                                                                                                                       <  1:1323113/140‑1

       ATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATAT                                                                                                                                     <  1:1253366/140‑1

       ATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           <  2:1109012/134‑1

       ATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           >  1:1109012/1‑134

        TAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATA                                                                                                                                    <  1:370534/140‑1

         AGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAA                                                                                                                                   >  1:1096150/1‑140

           TCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACA                                                                                                                                 >  1:597199/1‑140

           TCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACA                                                                                                                                 >  1:301458/1‑140

              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                              >  2:103934/1‑140

              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                              >  1:158673/1‑140

              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAA                                                                                                                                <  1:831111/138‑1

              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGA                                                                                                                                        >  1:608626/1‑130

              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           <  1:429309/127‑1

              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           >  1:723434/1‑127

              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           >  2:429309/1‑127

              TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                           <  2:723434/127‑1

                ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATTGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGA                                                                                                                             >  2:903635/1‑140

                ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGAT                                                                                                                            >  1:1108503/1‑140

                ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGAT                                                                                                                            >  1:150414/1‑140

                  AGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAG                                                                                                                          <  2:1267216/140‑1

                    CCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCT                                                                                                                        >  2:1196375/1‑140

                    CCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCT                                                                                                                        <  1:635466/140‑1

                      ATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTC                                                                                                                      >  1:718944/1‑140

                         TTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCG                                                                                                                   >  2:138594/1‑140

                              CTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAA                                                                                                              >  1:692301/1‑140

                                   GAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTT                                                                                                         <  1:220266/140‑1

                                    AAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTG                                                                                                        >  1:979016/1‑140

                                     AGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGC                                                                                                       <  2:718944/140‑1

                                     AGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGC                                                                                                       <  1:138594/140‑1

                                      GGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCA                                                                                                      <  2:463537/140‑1

                                      GGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCA                                                                                                      <  1:277604/140‑1

                                      GGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCA                                                                                                      <  2:1039093/140‑1

                                         ATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAC                                                                                                   <  1:1196375/140‑1

                                          TTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACA                                                                                                  <  2:229172/140‑1

                                           TTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                 <  2:1108503/140‑1

                                           TTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                 <  2:597199/140‑1

                                           TTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                 <  2:692301/140‑1

                                             TTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAG                                                                                               <  1:1249755/140‑1

                                               AAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAGACAGGG                                                                                             <  2:1249284/140‑1

                                               AAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGG                                                                                             <  1:457976/140‑1

                                                  CCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCC‑TTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAA                                                                                         >  2:298697/1‑140

                                                    GGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGG                                                                                             >  2:1250669/1‑135

                                                    GGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGG                                                                                             <  1:1250669/135‑1

                                                     GCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACT                                                                                       <  1:885219/140‑1

                                                        TGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGAT                                                                                    <  1:997599/140‑1

                                                              AGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTC                                                                              <  1:822763/140‑1

                                                              AGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTC                                                                              <  2:960313/140‑1

                                                                    GCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGT                                                                                 >  2:329771/1‑131

                                                                    GCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGT                                                                                 <  1:329771/131‑1

                                                                     CCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGTAGACACAGGGATAACTGATCGTGTCAATGACA                                                                       <  1:1165826/140‑1

                                                                     CCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACA                                                                       <  1:146237/140‑1

                                                                          TCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATA                                                                  >  1:23850/1‑140

                                                                          TCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGAT                                                                                    >  1:1179011/1‑122

                                                                          TCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGAT                                                                                    <  2:1179011/122‑1

                                                                              GACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATG                                                              >  1:974468/1‑140

                                                                                aAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                            <  2:316104/139‑1

                                                                                CAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                            <  2:217052/140‑1

                                                                                CAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                            <  2:246200/140‑1

                                                                                CAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                            <  2:727163/140‑1

                                                                                   ATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGA                                                         <  1:398497/140‑1

                                                                                   ATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGA                                                         >  1:463248/1‑140

                                                                                   ATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGA                                                         >  2:398497/1‑140

                                                                                   ATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGA                                                         <  2:41666/140‑1

                                                                                   ATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                            >  2:590132/1‑137

                                                                                    TGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGAT                                                        <  2:459666/140‑1

                                                                                                   CAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGA                                         <  2:849668/140‑1

                                                                                                      AGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAA                                      >  2:1064850/1‑140

                                                                                                        CGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAA                                    >  2:1130944/1‑140

                                                                                                           GTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCC                                 >  2:1081488/1‑140

                                                                                                           GTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCC                                 >  2:381053/1‑140

                                                                                                              GCAA‑TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGAC                              >  1:1226133/1‑140

                                                                                                                   TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGAT                          >  2:787264/1‑140

                                                                                                                   TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGAT                          >  1:394718/1‑140

                                                                                                                    GTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATG                         <  2:606736/140‑1

                                                                                                                      TGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTG                       >  2:620940/1‑140

                                                                                                                        CCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGAC                     >  1:381670/1‑140

                                                                                                                        CCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGAC                     <  2:885088/140‑1

                                                                                                                        CCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGAC                     >  2:1058487/1‑140

                                                                                                                        CCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGA                               >  1:514958/1‑130

                                                                                                                        CCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGA                               <  2:514958/130‑1

                                                                                                                         CTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACG                    <  1:381053/140‑1

                                                                                                                         CTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACG                    <  2:301458/140‑1

                                                                                                                         CTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACG                    <  1:1081488/140‑1

                                                                                                                          TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGT                   <  1:521437/140‑1

                                                                                                                              TTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTT               <  1:787264/140‑1

                                                                                                                                  CGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGG           <  2:342657/140‑1

                                                                                                                                  CGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGG           <  1:1130944/140‑1

ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAA‑TGTTGCCTTTTTTTTCGCCATTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3363140‑3363001

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTG  >  NC_000913/3766087‑3766224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.