Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,387,870	T→C	T107A (ACC→GCC)	aaeB ←	aromatic carboxylic acid efflux pump subunit AaeB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,387,870	0	T	C	100.0%	337.6 / NA	94	T107A (ACC→GCC)	aaeB	aromatic carboxylic acid efflux pump subunit AaeB
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/55);  total (39/55)

TCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCG  >  NC_000913/3387734‑3388006                                                                                                                                         |                                                                                                                                         tcGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGcaca                                                                                                                                       >  2:1038806/1‑140 (MQ=255)         aCGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCgg                                                                                                                               <  1:602139/140‑1 (MQ=255)          cGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGc                                                                                                                              <  2:831673/140‑1 (MQ=255)          cGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGc                                                                                                                              <  2:1127495/140‑1 (MQ=255)            ttCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGccc                                                                                                                            <  2:1360981/140‑1 (MQ=255)            ttCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGccc                                                                                                                            <  2:610063/140‑1 (MQ=255)             tCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCa                                                                                                                           >  1:1048567/1‑140 (MQ=255)             tCGACGGCAAACTGCGGCGT‑AGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAg                                                                                                                          >  2:544284/1‑140 (MQ=255)              cGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGGTCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAg                                                                                                                          >  1:144519/1‑140 (MQ=255)                 cGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATa                                                                                                                       >  1:1287681/1‑140 (MQ=255)                   gCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACa                                                                                                                     <  2:1183399/140‑1 (MQ=255)                    cAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACaaaa                                                                                                                                    <  1:421548/124‑1 (MQ=255)                    cAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACaaaa                                                                                                                                    >  2:421548/1‑124 (MQ=255)                    cAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAg                                                                                                                    <  2:173511/140‑1 (MQ=255)                         tGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCacac                                                                                                               >  1:419118/1‑140 (MQ=255)                             gcgTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGa                                                                                                           <  2:207057/140‑1 (MQ=255)                             gcgTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGa                                                                                                           <  1:485645/140‑1 (MQ=255)                             gcgTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGa                                                                                                           <  1:486387/140‑1 (MQ=255)                             gcgTAAGCAATGGTTCCGGCTGAAAGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGa                                                                                                           <  1:406808/140‑1 (MQ=255)                              cgTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGaa                                                                                                          <  2:1048567/140‑1 (MQ=255)                              cgTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGaa                                                                                                          <  2:17497/140‑1 (MQ=255)                              cgTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGaa                                                                                                          <  1:736668/140‑1 (MQ=255)                              cgTAAGCAATGGTTCCGGCTGAATGGGGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGaa                                                                                                          >  2:153456/1‑140 (MQ=255)                                tAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAatc                                                                                                        <  1:978980/140‑1 (MQ=255)                                tAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAatc                                                                                                        <  2:47709/140‑1 (MQ=255)                                tAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAatc                                                                                                        <  1:368929/140‑1 (MQ=255)                                   tcAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGc                                                                                                                   <  2:835727/125‑1 (MQ=255)                                   gCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGc                                                                                                                   >  1:835727/1‑126 (MQ=255)                                       tGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCaata                                                                                                 >  2:672553/1‑140 (MQ=255)                                       tGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCaata                                                                                                 <  2:1287681/140‑1 (MQ=255)                                        ggTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCaataa                                                                                                >  1:804842/1‑140 (MQ=255)                                        ggTACCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCaataa                                                                                                <  2:1162318/140‑1 (MQ=255)                                          ttCCGGCTGAATGGTGATCACAATGGTCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATg                                                                                              <  2:144519/140‑1 (MQ=255)                                            ccGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGt                                                                                            >  2:316756/1‑140 (MQ=255)                                            ccGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGt                                                                                            >  1:161189/1‑140 (MQ=255)                                             cGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTg                                                                                           >  1:267214/1‑140 (MQ=255)                                               gCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTgcg                                                                                         <  2:540403/140‑1 (MQ=255)                                               gCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTgcg                                                                                         >  1:640967/1‑140 (MQ=255)                                               gCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTgcg                                                                                         >  2:73123/1‑140 (MQ=255)                                                 tGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGcgcg                                                                                       <  1:316756/140‑1 (MQ=255)                                                    aTGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGat                                                                                    >  2:276555/1‑140 (MQ=255)                                                    aTGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGat                                                                                    <  2:419118/140‑1 (MQ=255)                                                    aTGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGat                                                                                    <  1:477186/140‑1 (MQ=255)                                                    aTGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGat                                                                                    <  2:684437/140‑1 (MQ=255)                                                        tGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGatcatc                                                                                >  1:1233109/1‑140 (MQ=255)                                                          aTCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGc                                                                              >  2:603392/1‑140 (MQ=255)                                                           tCACAATGATCAGCGCGGTATACCCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCa                                                                             <  1:961352/140‑1 (MQ=255)                                                           tCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCg                                                                               <  2:333985/138‑1 (MQ=255)                                                           tCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCg                                                                               >  1:333985/1‑138 (MQ=255)                                                            cacaATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCaa                                                                            <  2:161189/140‑1 (MQ=255)                                                            cacaATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCaa                                                                            <  1:153456/140‑1 (MQ=255)                                                              caATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAatg                                                                          >  1:1329198/1‑140 (MQ=255)                                                                 tGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAatgatg                                                                       <  2:804842/140‑1 (MQ=255)                                                                      aGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGat                                                                                    <  1:658663/122‑1 (MQ=255)                                                                      aGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGat                                                                                    >  2:658663/1‑122 (MQ=255)                                                                      aGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCAc                                                                  <  2:1233109/140‑1 (MQ=255)                                                                      aGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCAc                                                                  >  2:1302678/1‑140 (MQ=255)                                                                       gcgcGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCAcc                                                                 <  2:406045/140‑1 (MQ=255)                                                                       gcgcGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGACACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCAcc                                                                 >  2:402144/1‑140 (MQ=255)                                                                       gcgcGGTATAACCGGCCAGCCCCCACGCACACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCAcc                                                                 >  1:1130386/1‑140 (MQ=255)                                                                         gcgGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAg                                                               <  2:487694/140‑1 (MQ=255)                                                                         gcgGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAg                                                               <  1:1302678/140‑1 (MQ=255)                                                                           ggTATAACCGGCCAGCCCCCACGCACACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTc                                                             <  2:1130386/140‑1 (MQ=255)                                                                             tataACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCg                                                           >  1:318728/1‑140 (MQ=255)                                                                             tataACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCg                                                           >  1:1217264/1‑140 (MQ=255)                                                                                   cGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATa                                                     <  2:318728/140‑1 (MQ=255)                                                                                     gCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACa                                                   <  1:1038806/140‑1 (MQ=255)                                                                                      ccAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAg                                                  >  1:580007/1‑140 (MQ=255)                                                                                       cAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGc                                                 >  1:666227/1‑140 (MQ=255)                                                                                       cAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGc                                                 >  1:723696/1‑140 (MQ=255)                                                                                        aGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGcc                                                <  2:933511/140‑1 (MQ=255)                                                                                          cccccACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCCCAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCaa                                              >  2:1160631/1‑140 (MQ=255)                                                                                              cACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATAc                                                    >  2:1181553/1‑130 (MQ=255)                                                                                              cACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATAc                                                    <  1:1181553/130‑1 (MQ=255)                                                                                              cACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATaaa                                          <  1:1160631/140‑1 (MQ=255)                                                                                               aCGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCCATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAAt                                         >  2:1262822/1‑140 (MQ=255)                                                                                                    tACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGcc                                    >  2:531893/1‑140 (MQ=255)                                                                                                             tCTATTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATgcg                           >  2:605312/1‑140 (MQ=255)                                                                                                                aTTCGTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCaa                        <  2:580007/140‑1 (MQ=255)                                                                                                                    gTACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAg                    <  1:357383/140‑1 (MQ=255)                                                                                                                     tACCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGc                   <  2:267214/140‑1 (MQ=255)                                                                                                                      aCCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCaa                        >  1:839645/1‑134 (MQ=255)                                                                                                                      aCCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCaa                        <  2:839645/134‑1 (MQ=255)                                                                                                                      aCCAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGcc                  >  2:1047884/1‑140 (MQ=255)                                                                                                                       ccAGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCa                 <  1:605312/140‑1 (MQ=255)                                                                                                                         aGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACg               <  2:666227/140‑1 (MQ=255)                                                                                                                         aGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACg               <  1:531893/140‑1 (MQ=255)                                                                                                                         aGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACg               <  1:544284/140‑1 (MQ=255)                                                                                                                         aGCGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACg               <  1:603392/140‑1 (MQ=255)                                                                                                                           cGAGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGAt             >  2:799009/1‑140 (MQ=255)                                                                                                                             aGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCa                 <  1:1015347/134‑1 (MQ=255)                                                                                                                             aGGATATCCAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCa                 >  2:1015347/1‑134 (MQ=255)                                                                                                                                    ccAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAg    <  2:640967/140‑1 (MQ=255)                                                                                                                                    ccAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAg    >  1:532801/1‑140 (MQ=255)                                                                                                                                    ccAGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAg    >  2:1227226/1‑140 (MQ=255)                                                                                                                                      aGGCACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAgcg  <  1:276555/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                         TCGCTACAACGTTCGACGGCAAACTGCGGCGTAAGCAATGGTTCCGGCTGAATGGTGATCACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCG  >  NC_000913/3387734‑3388006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑