Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,474,111	T→C	intergenic (‑30/+67)	rpsG ← / ← rpsL	30S ribosomal subunit protein S7/30S ribosomal subunit protein S12

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,474,111	0	T	C	100.0%	289.3 / NA	80	intergenic (‑30/+67)	rpsG/rpsL	30S ribosomal subunit protein S7/30S ribosomal subunit protein S12
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (40/40);  total (40/40)

ACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTC  >  NC_000913/3473980‑3474246                                                                                                                                    |                                                                                                                                        accatctaccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCaaaa                                                                                                                                   <  1:13430/138‑1 (MQ=255) accatctaccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCaaaa                                                                                                                                   >  2:13430/1‑138 (MQ=255)    atctaccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTa                                                                                                                              <  1:885887/140‑1 (MQ=255)    atctaccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTa                                                                                                                              <  2:1313065/140‑1 (MQ=255)        accatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGag                                                                                                                          <  1:893325/140‑1 (MQ=255)        accatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGag                                                                                                                          <  2:306964/140‑1 (MQ=255)         ccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGagt                                                                                                                         >  2:754735/1‑140 (MQ=255)         ccatcAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGagt                                                                                                                         <  1:135629/140‑1 (MQ=255)              aGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGagtttagt                                                                                                                    >  1:1256938/1‑140 (MQ=255)               ggATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGagtttagtt                                                                                                                   >  1:839453/1‑140 (MQ=255)               ggATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGagtttagtt                                                                                                                   >  2:1065927/1‑140 (MQ=255)                gATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGagtttagttt                                                                                                                  <  2:550741/140‑1 (MQ=255)                gATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGagtttagttt                                                                                                                  >  1:1358686/1‑140 (MQ=255)                 atatTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTg                                                                                                                 >  1:1210844/1‑140 (MQ=255)                   atTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGag                                                                                                                          >  2:695984/1‑129 (MQ=255)                   atTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGag                                                                                                                          <  1:695984/129‑1 (MQ=255)                   atTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGAc                                                                                                               >  2:1301000/1‑140 (MQ=255)                   atTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGAc                                                                                                               >  2:991324/1‑140 (MQ=255)                     ttACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACAt                                                                                                             <  2:918789/140‑1 (MQ=255)                       aCAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACAttt                                                                                                           <  1:1065927/140‑1 (MQ=255)                          aaTTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGagtttagttt                                                                                                                  <  2:1358378/130‑1 (MQ=255)                          aaTTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGagtttagttt                                                                                                                  >  1:1358378/1‑130 (MQ=255)                          aaTTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAg                                                                                                        >  2:182666/1‑140 (MQ=255)                            tttAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACAttt                                                                                                           <  2:1103101/135‑1 (MQ=255)                            tttAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACAttt                                                                                                           >  1:1103101/1‑135 (MQ=255)                              tAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTaa                                                                                                    >  1:28274/1‑140 (MQ=255)                                    gcagTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGtt                                                                                              <  2:680115/140‑1 (MQ=255)                                     cagTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGttt                                                                                             >  2:824735/1‑140 (MQ=255)                                       gTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTgg                                                                                           <  1:291343/140‑1 (MQ=255)                                         tCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGcc                                                                                         <  1:1103413/140‑1 (MQ=255)                                         tCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGcc                                                                                         <  1:1301000/140‑1 (MQ=255)                                            gATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCctta                                                                                      <  2:581356/140‑1 (MQ=255)                                               ccGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCcttactt                                                                                   >  1:1345322/1‑140 (MQ=255)                                                cGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCcttactta                                                                                  >  2:782530/1‑140 (MQ=255)                                                  aaCTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAAc                                                                                >  2:163175/1‑140 (MQ=255)                                                  aaCTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAAc                                                                                <  1:782530/140‑1 (MQ=255)                                                  aaCTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAAc                                                                                >  1:812399/1‑140 (MQ=255)                                                  aaCTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAAc                                                                                >  2:1224366/1‑140 (MQ=255)                                                   aCTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACg                                                                               <  1:824735/140‑1 (MQ=255)                                                   aCTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACg                                                                               <  1:315702/140‑1 (MQ=255)                                                      tCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTCATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGgag                                                                            <  2:839453/140‑1 (MQ=255)                                                      tCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGGCTTACTTAACGgag                                                                            <  2:1256938/140‑1 (MQ=255)                                                       cGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGgaga                                                                           <  2:118024/140‑1 (MQ=255)                                                           tCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGgag                                                                            <  2:415229/135‑1 (MQ=255)                                                           tCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGgag                                                                            >  1:415229/1‑135 (MQ=255)                                                            ccGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCAt                                                                      >  2:894384/1‑140 (MQ=255)                                                             cGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCAtt                                                                     <  2:812399/140‑1 (MQ=255)                                                             cGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCAtt                                                                     <  1:108577/140‑1 (MQ=255)                                                             cGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCAtt                                                                     <  1:416578/140‑1 (MQ=255)                                                                   aaTTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCt                                                               <  2:1358686/140‑1 (MQ=255)                                                                       ttACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGTCTTACTTAACGGAGAACCATTAAGCCTTAgg                                                           >  2:777662/1‑140 (MQ=255)                                                                         aCGCTGACCAATGACGCGACGACGTCGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGAc                                                         >  1:654259/1‑140 (MQ=255)                                                                          cGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACg                                                        <  2:682760/140‑1 (MQ=255)                                                                             tGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCtt                                                     <  1:163175/140‑1 (MQ=255)                                                                              gACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTc                                                    <  1:991324/140‑1 (MQ=255)                                                                                  aaTGACGCGACGTCGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCACAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGc                                                <  2:468900/140‑1 (MQ=255)                                                                                  aaTGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGc                                                <  2:28274/140‑1 (MQ=255)                                                                                  aaTGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGc                                                <  2:364848/140‑1 (MQ=255)                                                                                   aTGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGcc                                               <  2:1327229/140‑1 (MQ=255)                                                                                         cgacgaCGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACg                                                 >  1:585734/1‑132 (MQ=255)                                                                                         cgacgaCGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACg                                                 <  2:585734/132‑1 (MQ=255)                                                                                         cgacgaCGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACtt                                         >  2:880616/1‑140 (MQ=255)                                                                                               cgTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACg                                   >  1:1195844/1‑140 (MQ=255)                                                                                                      tGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGc                            >  1:1258038/1‑140 (MQ=255)                                                                                                      tGGAAATACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGc                            >  2:400495/1‑140 (MQ=255)                                                                                                         aaaTACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTa                         >  2:140084/1‑140 (MQ=255)                                                                                                         aaaTACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTa                         <  1:694943/140‑1 (MQ=255)                                                                                                            tACTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCACACTTGGAACGAGCCTGCTTACgg                      >  1:1186645/1‑140 (MQ=255)                                                                                                             aCTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGt                     >  1:1116337/1‑140 (MQ=255)                                                                                                              cTCCGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTc                    >  1:100922/1‑140 (MQ=255)                                                                                                                 cGTTGTTAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCttt                 >  1:140966/1‑140 (MQ=255)                                                                                                                   ttgttAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTCAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCACACTTGGAACGAGCCTGCTTACGGTCTTTaa               <  2:1186645/140‑1 (MQ=255)                                                                                                                     gttAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACg             >  1:541674/1‑140 (MQ=255)                                                                                                                      ttAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGc            <  2:1048707/140‑1 (MQ=255)                                                                                                                      ttAATTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGc            >  2:965794/1‑140 (MQ=255)                                                                                                                        aaTTCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCg          >  1:1124218/1‑140 (MQ=255)                                                                                                                           tCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAg       <  1:1224366/140‑1 (MQ=255)                                                                                                                           tCAGGATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAg       <  1:400495/140‑1 (MQ=255)                                                                                                                               gATTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGt   >  1:1234212/1‑140 (MQ=255)                                                                                                                                aTTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTc  >  2:1315212/1‑140 (MQ=255)                                                                                                                                aTTGCCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTc  >  1:68512/1‑140 (MQ=255)                                                                                                                                    |                                                                                                                                        ACCATCTACCATCAGGATATTTACAAATTTAGCCAGCAGTTCTGATCCGAACTTCGGATCCGGCAGAATTTTACGCTGACCAATGACGCGACGACGTGGCATGGAAATACTCCGTTGTTAATTCAGGATTGTCCAAAACTCTACGAGTTTAGTTTGACATTTAAGTTAAAACGTTTGGCCTTACTTAACGGAGAACCATTAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTC  >  NC_000913/3473980‑3474246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑