| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,594,212 | C→T | E423E (GAG→GAA) | livM ← | branched chain amino acid/phenylalanine ABC transporter membrane subunit LivM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,594,212 | 0 | C | T | 97.4% | 261.9 / ‑2.3 | 78 | E423E (GAG→GAA) | livM | branched chain amino acid/phenylalanine ABC transporter membrane subunit LivM |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (38/38); total (39/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01 | |||||||||||
TTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGTTGAAATCACGCAT > NC_000913/3594088‑3594346 | ttAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTgcg > 2:1231993/1‑140 (MQ=255)ttAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTgcg > 2:62724/1‑140 (MQ=255) tAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTgcgc < 1:1231993/140‑1 (MQ=255) gCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTgcg < 2:1231937/135‑1 (MQ=255) gCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTgcg > 1:1231937/1‑135 (MQ=255) gATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGttttt < 2:1224413/140‑1 (MQ=255) aTTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTc > 1:25974/1‑140 (MQ=255) aTTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTc > 2:22180/1‑140 (MQ=255) ttAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCa > 1:934888/1‑140 (MQ=255) ctcCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCgg > 2:1112409/1‑140 (MQ=255) ccTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGgc < 1:1084408/140‑1 (MQ=255) ccTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGgc < 2:434321/140‑1 (MQ=255) tGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGgcgc > 2:205499/1‑140 (MQ=255) gCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGcgcg < 2:934888/140‑1 (MQ=255) gggTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTc > 1:930327/1‑140 (MQ=255) ggTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCa < 1:1229384/140‑1 (MQ=255) ggTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCa > 1:248145/1‑140 (MQ=255) ggTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCa > 1:1253693/1‑140 (MQ=255) gTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTc > 2:1300374/1‑123 (MQ=255) gTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTc < 1:1300374/123‑1 (MQ=255) aCAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATgg > 2:1138864/1‑140 (MQ=255) aGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGgc > 2:616711/1‑140 (MQ=255) gTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGgca > 1:679930/1‑140 (MQ=255) tCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGgcagc < 1:616711/140‑1 (MQ=255) gATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGc > 2:460237/1‑140 (MQ=255) gATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGc > 2:463258/1‑140 (MQ=255) aTTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGcc < 1:62724/140‑1 (MQ=255) aCGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGc > 2:940532/1‑140 (MQ=255) aCGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGc > 1:100468/1‑140 (MQ=255) cGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCg < 1:463258/140‑1 (MQ=255) cGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCg < 1:120329/140‑1 (MQ=255) tCACTGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGcc < 2:1253693/140‑1 (MQ=255) ccGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGa < 1:460237/140‑1 (MQ=255) cGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGat > 1:1307792/1‑140 (MQ=255) gCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGatc < 1:1230962/140‑1 (MQ=255) gCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGatc < 2:1311624/140‑1 (MQ=255) gCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGatc < 2:679930/140‑1 (MQ=255) agcagGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGatcatc < 1:21954/140‑1 (MQ=255) gccgccGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAg < 1:1112409/140‑1 (MQ=255) gccgccGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAg < 1:940532/140‑1 (MQ=255) ccgccgAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGc < 2:930327/140‑1 (MQ=255) cgccgAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCa > 1:251756/1‑140 (MQ=255) ccgAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAg < 1:592192/136‑1 (MQ=255) ccgAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAg > 2:592192/1‑136 (MQ=255) cgAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCa < 2:23165/140‑1 (MQ=255) aaGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATc > 1:703548/1‑140 (MQ=255) gcATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAac < 2:703548/140‑1 (MQ=255) catcatCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAacc > 2:1474/1‑140 (MQ=255) tcatcaGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAaccac > 2:1078447/1‑140 (MQ=255) tcatcaGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAaccac > 1:879913/1‑140 (MQ=255) catcaGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAaccacc < 2:879913/140‑1 (MQ=255) catcaGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAaccacc < 2:1307792/140‑1 (MQ=255) atcaGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCg < 1:1078447/140‑1 (MQ=255) caGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAg < 1:22180/140‑1 (MQ=255) caGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAg < 1:948751/140‑1 (MQ=255) ggCCGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGCTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCa > 1:902842/1‑140 (MQ=255) ccGTTAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCAtt < 1:769574/140‑1 (MQ=255) ttAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAAc > 2:940117/1‑140 (MQ=255) ttAACAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAAc < 1:205499/140‑1 (MQ=255) cAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGc < 2:248145/140‑1 (MQ=255) cAGATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGc < 1:1138864/140‑1 (MQ=255) gATAATAATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTg > 2:155818/1‑140 (MQ=255) ataataATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAAc < 1:273745/133‑1 (MQ=255) ataataATGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAAc > 2:273745/1‑133 (MQ=255) ataatGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTa > 2:240330/1‑128 (MQ=255) ataatGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTa < 1:240330/128‑1 (MQ=255) ataatGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTAtt < 2:25974/140‑1 (MQ=255) ataatGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTAtt > 1:529703/1‑140 (MQ=255) tGGCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGtt > 2:163153/1‑140 (MQ=255) ggCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGTTg < 1:163153/140‑1 (MQ=255) gCTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGTTGa < 1:940117/140‑1 (MQ=255) cTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTa < 1:928710/131‑1 (MQ=255) cTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGTTGaa > 1:1352418/1‑140 (MQ=255) cTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGTTGaa > 1:1122053/1‑140 (MQ=255) cTGACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGCGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTa > 2:928710/1‑131 (MQ=255) gACTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGTTGAAAt > 1:1057387/1‑140 (MQ=255) cTCATGCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGTTGAAATCa > 2:807253/1‑140 (MQ=255) gCCTGTTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGTTGAAATCACGCAt > 2:1091777/1‑140 (MQ=255) | TTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGTTGAAATCACGCAT > NC_000913/3594088‑3594346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |