BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,633,534	T→C	pseudogene (925/1607 nt)	yhiL ←	putative uncharacterized protein YhiL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,633,534	0	T	C	100.0%	359.3 / NA	100	pseudogene (925/1607 nt)	yhiL	putative uncharacterized protein YhiL
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (50/50); total (50/50)

Only 100 of 102 total aligned reads displayed.

AGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGTACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACTTTATT  >  NC_000913/3633397‑3633666

aGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCAc                                                                                                                                    >  1:648332/1‑140 (MQ=255)

 gTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACt                                                                                                                                   <  1:236819/140‑1 (MQ=255)

    taGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTaaa                                                                                                                                >  1:1096417/1‑140 (MQ=255)

    taGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTaaa                                                                                                                                <  2:507760/140‑1 (MQ=255)

       ttACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCt                                                                                                                             <  1:919215/140‑1 (MQ=255)

        tACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTa                                                                                                                            <  2:1096417/140‑1 (MQ=255)

         aCCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTAt                                                                                                                           <  2:552349/140‑1 (MQ=255)

         aCCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTAt                                                                                                                           >  2:698525/1‑140 (MQ=255)

         aCCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTAt                                                                                                                           <  1:698525/140‑1 (MQ=255)

         aCCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTAt                                                                                                                           <  2:797665/140‑1 (MQ=255)

            aTTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTAt                                                                                                                           >  2:647432/1‑137 (MQ=255)

            aTTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTAt                                                                                                                           <  1:647432/137‑1 (MQ=255)

            aTTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGc                                                                                                                        >  2:298120/1‑140 (MQ=255)

            aTTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGc                                                                                                                        >  2:545070/1‑140 (MQ=255)

            aTTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGc                                                                                                                        >  2:531811/1‑140 (MQ=255)

            aTTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGc                                                                                                                        >  1:1177265/1‑140 (MQ=255)

            aTTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGc                                                                                                                        >  1:204029/1‑140 (MQ=255)

            aTTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTAATACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGc                                                                                                                        <  1:135823/140‑1 (MQ=255)

              tAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTAt                                                                                                                           <  2:708026/135‑1 (MQ=255)

              tAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTAt                                                                                                                           >  1:708026/1‑135 (MQ=255)

               aaaaTTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTg                                                                                                                     >  2:1363490/1‑140 (MQ=255)

                   ttGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATg                                                                                                                 <  1:1278692/140‑1 (MQ=255)

                   ttGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATg                                                                                                                 <  2:204029/140‑1 (MQ=255)

                   ttGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATg                                                                                                                 <  1:65912/140‑1 (MQ=255)

                     gATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGAt                                                                                                               >  2:234731/1‑140 (MQ=255)

                     gATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGAt                                                                                                               <  1:770061/140‑1 (MQ=255)

                       tttCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATcc                                                                                                             <  2:648332/140‑1 (MQ=255)

                        ttCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATccc                                                                                                            <  1:298120/140‑1 (MQ=255)

                         tCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATcccc                                                                                                           <  2:333916/140‑1 (MQ=255)

                         tCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATcccc                                                                                                           <  1:649847/140‑1 (MQ=255)

                         tCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATcccc                                                                                                           <  2:1177265/140‑1 (MQ=255)

                           aTGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATg                                                                                                                 <  1:116155/132‑1 (MQ=255)

                           aTGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATg                                                                                                                 >  2:116155/1‑132 (MQ=255)

                             gATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAgg                                                                                                       <  1:90219/140‑1 (MQ=255)

                               tttCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTCATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGaa                                                                                                     <  1:1047008/140‑1 (MQ=255)

                                 tCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGa                                                                                                   <  1:1363490/140‑1 (MQ=255)

                                     gccagAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACa                                                                                               >  1:138196/1‑140 (MQ=255)

                                     gccagAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACa                                                                                               <  2:782410/140‑1 (MQ=255)

                                      ccagAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACaa                                                                                              <  1:234731/140‑1 (MQ=255)

                                          aaCGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGa                                                                                                      >  2:1181565/1‑128 (MQ=255)

                                          aaCGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGa                                                                                                      <  1:1181565/128‑1 (MQ=255)

                                          aaCGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACaa                                                                                              <  2:653896/136‑1 (MQ=255)

                                          aaCGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACaa                                                                                              >  1:653896/1‑136 (MQ=255)

                                              acgacATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTAt                                                                                      >  1:507537/1‑140 (MQ=255)

                                                 ccATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGc                                                                                   <  2:138196/139‑1 (MQ=255)

                                                    tttttATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATc                                                                                <  2:1107037/140‑1 (MQ=255)

                                                        tattaATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTcc                                                                            <  1:887966/140‑1 (MQ=255)

                                                             aTACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTaa                                                                       >  1:1003670/1‑140 (MQ=255)

                                                                    tATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACa                                                                >  2:514945/1‑140 (MQ=255)

                                                                      tCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATg                                                              >  1:1106349/1‑140 (MQ=255)

                                                                           attaCCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGAt                                                         >  2:182854/1‑140 (MQ=255)

                                                                                ccTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGt                                                             >  2:581225/1‑131 (MQ=255)

                                                                                ccTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGt                                                             <  1:581225/131‑1 (MQ=255)

                                                                                ccTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAAc                                                    >  1:684217/1‑140 (MQ=255)

                                                                                ccTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAAc                                                    <  2:18831/140‑1 (MQ=255)

                                                                                ccTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCCATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAAc                                                    <  2:1124478/140‑1 (MQ=255)

                                                                                 cTCCATATTTCGCATAGTATTTATCAAAGAAACAATATACTAATCACCAAAAATAGTACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGACATCGCCCCGTCCTTTCAAAAAACATGTTGATGCACCt                                                   >  2:1283598/1‑140 (MQ=255)

                                                                                  tCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGt                                                             >  1:1285833/1‑129 (MQ=255)

                                                                                  tCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGt                                                             <  2:1285833/129‑1 (MQ=255)

                                                                                  tCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGa                                                          >  1:958981/1‑132 (MQ=255)

                                                                                  tCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCaa                                                     <  2:1243679/137‑1 (MQ=255)

                                                                                  tCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTc                                                  >  1:386533/1‑140 (MQ=255)

                                                                                  tCCATATTTCGCATAGAATTTAGCAAAGTAAGCATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCaa                                                     >  1:1243679/1‑137 (MQ=255)

                                                                                    cATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCAt                                                >  1:896858/1‑140 (MQ=255)

                                                                                    cATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCAt                                                >  1:476223/1‑140 (MQ=255)

                                                                                     atatTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCAtt                                               <  2:386533/140‑1 (MQ=255)

                                                                                     atatTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCAtt                                               <  2:507537/140‑1 (MQ=255)

                                                                                         ttCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATg                                                        <  2:1196913/127‑1 (MQ=255)

                                                                                         ttCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATg                                                        >  1:1196913/1‑127 (MQ=255)

                                                                                         ctCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAg                                           >  2:1207990/2‑140 (MQ=255)

                                                                                             cATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCa                                       >  2:1104938/1‑140 (MQ=255)

                                                                                              aTAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCAt                                      >  2:26529/1‑140 (MQ=255)

                                                                                                aGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGt                                    <  2:1003670/140‑1 (MQ=255)

                                                                                                     ttAGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGtctctc                               <  2:896858/140‑1 (MQ=255)

                                                                                                       aGCAAAGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGt                             >  2:59492/1‑140 (MQ=255)

                                                                                                            aGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGtctct                                <  2:84462/132‑1 (MQ=255)

                                                                                                            aGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGtctct                                >  1:84462/1‑132 (MQ=255)

                                                                                                            aGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTta                        >  2:331793/1‑140 (MQ=255)

                                                                                                            aGTAAGGATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTta                        >  2:283168/1‑140 (MQ=255)

                                                                                                                 ggATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATaaa                   <  1:182854/140‑1 (MQ=255)

                                                                                                                 ggATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATaaa                   <  1:514945/140‑1 (MQ=255)

                                                                                                                  gATATATTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGACCATGTCTCTCGTATTTAATAAAt                  >  2:942746/1‑140 (MQ=255)

                                                                                                                   atatatTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATc                 >  1:1004263/1‑140 (MQ=255)

                                                                                                                    tatatTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCg                <  2:486898/140‑1 (MQ=255)

                                                                                                                      tatTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGtctctc                               >  1:885025/1‑123 (MQ=255)

                                                                                                                      tatTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGtctctc                               <  2:885025/123‑1 (MQ=255)

                                                                                                                      tatTTATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTa              >  1:1114053/1‑140 (MQ=255)

                                                                                                                        tttATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCg                <  2:1165336/136‑1 (MQ=255)

                                                                                                                        tttATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCg                >  1:1165336/1‑136 (MQ=255)

                                                                                                                          tATCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGc          <  2:684217/140‑1 (MQ=255)

                                                                                                                            tCACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCAc        >  2:239642/1‑140 (MQ=255)

                                                                                                                             cACCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACt       >  2:501552/1‑140 (MQ=255)

                                                                                                                              aCCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTagag           <  2:652254/135‑1 (MQ=255)

                                                                                                                              aCCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTagag           >  1:652254/1‑135 (MQ=255)

                                                                                                                              aCCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCa         >  2:1260856/1‑137 (MQ=255)

                                                                                                                              aCCAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCa         <  1:1260856/137‑1 (MQ=255)

                                                                                                                                cAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACTtta    <  1:239642/140‑1 (MQ=255)

                                                                                                                                cAAAAATAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTCAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACTtta    >  2:956118/1‑140 (MQ=255)

                                                                                                                                  aaaaTAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACTttatt  >  2:705547/1‑140 (MQ=255)

                                                                                                                                  aaaaTAGCACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACTttatt  >  2:27771/1‑140 (MQ=255)

AGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGTACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTCTCTCGTATTTAATAAATCGTAGAGCACTTTATT  >  NC_000913/3633397‑3633666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`