BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,801,520	T→C	P160P (CCA→CCG)	waaJ ←	UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,801,520	0	T	C	100.0%	410.6 / NA	113	P160P (CCA→CCG)	waaJ	UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (59/54); total (59/54)

Only 100 of 114 total aligned reads displayed.

TCATAAGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCAATAATTG  >  NC_000913/3801384‑3801651

tCATAAGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGc                                                                                                                                  <  2:426555/140‑1 (MQ=255)

 cATAAGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCt                                                                                                                                 <  1:958275/140‑1 (MQ=255)

  aTAAGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTc                                                                                                                                >  2:200004/1‑140 (MQ=255)

    aaGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCaa                                                                                                                              <  1:315869/140‑1 (MQ=255)

    aaGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCaa                                                                                                                              <  1:675453/140‑1 (MQ=255)

     aGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAAc                                                                                                                             <  1:234691/140‑1 (MQ=255)

         tAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGc                                                                                                                                  >  2:187200/1‑131 (MQ=255)

         tAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAAc                                                                                                                             <  1:1067157/136‑1 (MQ=255)

         tAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCt                                                                                                                         >  2:253360/1‑140 (MQ=255)

            aCAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTa                                                                                                                      >  1:147970/1‑140 (MQ=255)

              aaCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTaac                                                                                                                    >  1:479135/1‑140 (MQ=255)

              aaCGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTaac                                                                                                                    >  2:158529/1‑140 (MQ=255)

                cGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTaacaa                                                                                                                  >  1:1334318/1‑140 (MQ=255)

                cGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTaacaa                                                                                                                  >  1:469075/1‑140 (MQ=255)

                cGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTaacaa                                                                                                                  >  1:149490/1‑140 (MQ=255)

                cGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTaacaa                                                                                                                  >  2:1074854/1‑140 (MQ=255)

                cGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTaacaa                                                                                                                  >  1:929346/1‑140 (MQ=255)

                 gCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTaacaac                                                                                                                 >  1:768739/1‑140 (MQ=255)

                             aGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGc                                                                                                     >  1:381744/1‑140 (MQ=255)

                              gTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCt                                                                                                    <  2:363367/140‑1 (MQ=255)

                              gTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCt                                                                                                    <  1:899051/140‑1 (MQ=255)

                               ttttGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTc                                                                                                   <  2:871963/140‑1 (MQ=255)

                               ttttGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTc                                                                                                   <  2:660803/140‑1 (MQ=255)

                                    cGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCAttt                                                                                              <  2:910434/140‑1 (MQ=255)

                                     gTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTa                                                                                             >  2:867285/1‑140 (MQ=255)

                                     gTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTa                                                                                             <  1:682053/140‑1 (MQ=255)

                                        aGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAc                                                                                          <  2:207042/140‑1 (MQ=255)

                                        aGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAc                                                                                          <  2:599270/140‑1 (MQ=255)

                                        aGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAc                                                                                          <  2:634599/140‑1 (MQ=255)

                                        aGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAc                                                                                          <  2:1334318/140‑1 (MQ=255)

                                         gCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAcc                                                                                         <  1:521788/140‑1 (MQ=255)

                                          cccATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAATCGCTCCATTTAAAccc                                                                                        >  2:540885/1‑140 (MQ=255)

                                          cccATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAccc                                                                                        <  2:540036/140‑1 (MQ=255)

                                          cccATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAccc                                                                                        <  1:200004/140‑1 (MQ=255)

                                          cccATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAccc                                                                                        <  2:1314600/140‑1 (MQ=255)

                                          cccATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAccc                                                                                        <  2:918370/140‑1 (MQ=255)

                                          cccATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAAccc                                                                                        <  1:867285/140‑1 (MQ=255)

                                            cATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAg                                                                                      <  2:469075/140‑1 (MQ=255)

                                                    tAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATa                                                                              >  1:88041/1‑140 (MQ=255)

                                                    tAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATa                                                                              >  1:352365/1‑140 (MQ=255)

                                                    tAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATa                                                                              >  1:1032524/1‑140 (MQ=255)

                                                     aaGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAg                                                                             <  1:873885/140‑1 (MQ=255)

                                                        tCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTg                                                                          >  2:1137580/1‑140 (MQ=255)

                                                         cTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTgg                                                                         >  2:999211/1‑140 (MQ=255)

                                                         cTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTgg                                                                         >  1:103927/1‑140 (MQ=255)

                                                         cTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTgg                                                                         <  1:208052/140‑1 (MQ=255)

                                                           aaataaaCGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCt                                                                       <  1:1074854/140‑1 (MQ=255)

                                                            aataaaCGACGCCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTa                                                                      >  1:1081103/1‑140 (MQ=255)

                                                            aataaaCGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAg                                                                             <  1:680133/133‑1 (MQ=255)

                                                            aataaaCGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAg                                                                             >  2:680133/1‑133 (MQ=255)

                                                              taaaCGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAat                                                                    <  2:103927/140‑1 (MQ=255)

                                                                  cGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAATAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCg                                                                >  2:180618/1‑140 (MQ=255)

                                                                  cGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCg                                                                >  1:739424/1‑140 (MQ=255)

                                                                  cGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCg                                                                >  1:1182358/1‑140 (MQ=255)

                                                                     cacCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCt                                                             <  1:158529/140‑1 (MQ=255)

                                                                      acCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCtt                                                            >  2:857427/1‑140 (MQ=255)

                                                                      acCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCtt                                                            <  1:1322058/140‑1 (MQ=255)

                                                                           aaTTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTacaa                                                       <  2:929346/140‑1 (MQ=255)

                                                                                   tACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATc                                               <  2:149490/140‑1 (MQ=255)

                                                                                   tACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATc                                               <  2:916551/140‑1 (MQ=255)

                                                                                     cTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTacaaac                                                     <  2:131816/132‑1 (MQ=255)

                                                                                     cTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTacaaac                                                     >  1:131816/1‑132 (MQ=255)

                                                                                     cTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTg                                             >  1:1073695/1‑140 (MQ=255)

                                                                                     cTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTg                                             >  1:389038/1‑140 (MQ=255)

                                                                                     cTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCACCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTg                                             >  1:987776/1‑140 (MQ=255)

                                                                                        cccAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATc                                               <  2:211911/135‑1 (MQ=255)

                                                                                        cccAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATc                                               >  1:211911/1‑135 (MQ=255)

                                                                                        cccAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCAt                                          >  2:409380/1‑140 (MQ=255)

                                                                                        cccAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCAt                                          >  2:72124/1‑140 (MQ=255)

                                                                                        cccAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCAt                                          <  2:508063/140‑1 (MQ=255)

                                                                                        cccAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCAt                                          >  2:425526/1‑140 (MQ=255)

                                                                                        cccAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCAt                                          <  1:72124/140‑1 (MQ=255)

                                                                                        cccAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCAt                                          >  1:214672/1‑140 (MQ=255)

                                                                                             gTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATc                                               >  1:568582/1‑130 (MQ=255)

                                                                                             gTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATc                                               <  2:568582/130‑1 (MQ=255)

                                                                                             gTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCAt                                          <  1:937183/135‑1 (MQ=255)

                                                                                             gTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGa                                     >  2:618002/1‑140 (MQ=255)

                                                                                             gTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGATAATATCGCCTTTACAAACAACATCTGCAt                                          >  2:937183/1‑135 (MQ=255)

                                                                                                aTTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATaa                                  >  2:971007/1‑140 (MQ=255)

                                                                                                  tCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGTAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAg                                >  2:365311/1‑140 (MQ=255)

                                                                                                  tCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCAt                                          >  1:65199/1‑130 (MQ=255)

                                                                                                  tCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCAt                                          <  2:65199/130‑1 (MQ=255)

                                                                                                      gATCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCaaa                            <  2:298872/140‑1 (MQ=255)

                                                                                                        tCAGACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACg                          >  2:377397/1‑140 (MQ=255)

                                                                                                           gACAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATc                       >  2:68409/1‑140 (MQ=255)

                                                                                                             cAACCTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCaa                     <  1:971007/140‑1 (MQ=255)

                                                                                                                ccTGGATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCg                  >  2:334979/1‑140 (MQ=255)

                                                                                                                   ggATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTa               >  2:893408/1‑140 (MQ=255)

                                                                                                                   ggATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTa               <  2:352365/140‑1 (MQ=255)

                                                                                                                   ggATACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAAGATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTa               >  2:1185103/1‑140 (MQ=255)

                                                                                                                     aTACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCaa                             >  2:133103/1‑124 (MQ=255)

                                                                                                                     aTACCGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCaa                             <  1:133103/124‑1 (MQ=255)

                                                                                                                         cGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCa         >  1:6064/1‑140 (MQ=255)

                                                                                                                         cGCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCa         >  1:933429/1‑140 (MQ=255)

                                                                                                                          gCCTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCaa        >  2:723123/1‑140 (MQ=255)

                                                                                                                           ccTTTTCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCaat       >  2:1339593/1‑140 (MQ=255)

                                                                                                                              tttCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCaataat    >  1:121381/1‑140 (MQ=255)

                                                                                                                              tttCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCaataat    >  1:612372/1‑140 (MQ=255)

                                                                                                                              tttCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCaataat    >  1:406964/1‑140 (MQ=255)

                                                                                                                                tCTTGCATCGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCAATAATTg  <  1:434310/140‑1 (MQ=255)

TCATAAGAATAGACAACGCTTTTTCTGTTAGTTTTGCGTCAGCCCATTTTTTTAAGTCTAAATAAACGACACCGGAATTAAAGTACTGCCCAAGTAATTCAGGATCAGACAACCTGGATACCGCCTTTTCTTGCATTGGCTCAACATCTTTAACAACAGCAGCAACCGCTCCATTTAAACCCAGATGTAATAGTTGGCTAATATCGCCTTTACAAACAACATCTGCATCAAGATAAAGCAAACGATCAAGCGTTAAACCCAATAATTG  >  NC_000913/3801384‑3801651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`