Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,448,096 C→T A68V (GCC→GTC) 
R50R (AGG→AGA
ytfP →
yzfA ←
gamma‑glutamylamine cyclotransferase family protein YtfP
putative YjfA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,448,0960CT100.0% 376.2 / NA 106A68V (GCC→GTC) 
R50R (AGG→AGA
ytfP
yzfA
gamma‑glutamylamine cyclotransferase family protein YtfP
putative YjfA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (52/54);  total (52/54)

Only 100 of 109 total aligned reads displayed.

AGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGCCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGACAGGGATAAG  >  NC_000913/4447961‑4448232
                                                                                                                                       |                                                                                                                                        
aGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTg                                                                                                                                      <  1:566737/140‑1 (MQ=255)
  ttACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTTACAACGCCACGCTGGCCGAACTTGATGTCTTgcg                                                                                                                                    >  1:372646/1‑140 (MQ=255)
     cTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGATAACGCCACGCTGGCCGAACTTGATGTCTTGCGCAc                                                                                                                                 >  1:1282637/1‑140 (MQ=255)
     cTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCAc                                                                                                                                 >  2:236341/1‑140 (MQ=255)
     cTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCAc                                                                                                                                 >  2:389012/1‑140 (MQ=255)
       gggCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCa                                                                                                                               >  1:1222294/1‑140 (MQ=255)
         gCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAgg                                                                                                                             <  2:145283/140‑1 (MQ=255)
           gATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAgggg                                                                                                                           <  2:434285/140‑1 (MQ=255)
            aTTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGc                                                                                                                          >  2:1141870/1‑140 (MQ=255)
            aTTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGc                                                                                                                          >  2:136325/1‑140 (MQ=255)
             tttCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCg                                                                                                                         >  2:936454/1‑140 (MQ=255)
                 aGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGa                                                                                                                     <  1:389012/140‑1 (MQ=255)
                    aTCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATa                                                                                                                  <  1:1141870/140‑1 (MQ=255)
                        aTAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATAcgcg                                                                                                              >  2:469958/1‑140 (MQ=255)
                          aaCTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAgg                                                                                                                             >  2:772840/1‑123 (MQ=255)
                          aaCTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATAcgcgcg                                                                                                            <  1:767552/140‑1 (MQ=255)
                             tACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCa                                                                                                         <  2:628068/140‑1 (MQ=255)
                               ccAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGt                                                                                                       >  1:1289728/1‑140 (MQ=255)
                                cAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGtt                                                                                                      >  2:1322611/1‑140 (MQ=255)
                                   ttGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATAcgcg                                                                                                              <  1:1237350/129‑1 (MQ=255)
                                   ttGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGAt                                                                                                   >  2:512767/1‑140 (MQ=255)
                                   ttGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCATATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATAcgcg                                                                                                              >  2:1237350/1‑129 (MQ=255)
                                       ataGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAg                                                                                               >  1:648570/1‑140 (MQ=255)
                                        taGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGa                                                                                              <  1:450638/140‑1 (MQ=255)
                                        taGCCTGGGCCACTATCCAGGCGCACTTCCGGGGCACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGCTGATACGCGCGCCAGTTGATTCAGa                                                                                              >  2:968445/1‑140 (MQ=255)
                                              gggCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGt                                                                                        >  1:1007546/1‑140 (MQ=255)
                                               ggCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTa                                                                                       >  1:1081956/1‑140 (MQ=255)
                                               ggCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTa                                                                                       <  1:236341/140‑1 (MQ=255)
                                               ggCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTa                                                                                       <  1:536664/140‑1 (MQ=255)
                                                gCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTAc                                                                                      >  2:35842/1‑140 (MQ=255)
                                                gCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTAc                                                                                      >  1:1213584/1‑140 (MQ=255)
                                                gCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTAc                                                                                      >  1:1107868/1‑140 (MQ=255)
                                                gCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTAc                                                                                      >  2:1072484/1‑140 (MQ=255)
                                                  cACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACgg                                                                                    <  2:1107868/140‑1 (MQ=255)
                                                  cACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACgg                                                                                    <  2:1288342/140‑1 (MQ=255)
                                                  cACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACgg                                                                                    <  1:936454/140‑1 (MQ=255)
                                                    cTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGa                                                                                  >  1:1284363/1‑140 (MQ=255)
                                                    cTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGa                                                                                  >  2:597069/1‑140 (MQ=255)
                                                     tATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGc                                                                                           >  2:753360/1‑130 (MQ=255)
                                                     tATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGc                                                                                           <  1:753360/130‑1 (MQ=255)
                                                     tATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAg                                                                                 >  1:746877/1‑140 (MQ=255)
                                                        ccAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGc                                                                              <  1:1322611/140‑1 (MQ=255)
                                                         cAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCa                                                                             <  2:1284363/140‑1 (MQ=255)
                                                         cAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCa                                                                             <  2:523758/140‑1 (MQ=255)
                                                         cAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCa                                                                             <  1:469958/140‑1 (MQ=255)
                                                           ggCGCAGTTCCGGGGAACGGAACGGTACACGGAGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGCGAATACGCGCGCCAGTTGAATTATACGTCGTAAGGGAGTGCATg                                                                           >  2:481816/1‑140 (MQ=255)
                                                               cAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCATACGCCGTACGGGAGGGCATGGATg                                                                       >  2:31734/1‑140 (MQ=255)
                                                               cAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATg                                                                       >  1:391031/1‑140 (MQ=255)
                                                                 gTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACgg                                                                                    >  1:1013651/1‑125 (MQ=255)
                                                                 gTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACgg                                                                                    <  2:1013651/125‑1 (MQ=255)
                                                                 gTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTa                                                                     >  1:1252768/1‑140 (MQ=255)
                                                                 gTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTa                                                                     >  2:359010/1‑140 (MQ=255)
                                                                  ttCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACgg                                                                                    <  2:1222351/124‑1 (MQ=255)
                                                                       gggAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTa                                                               >  1:243776/1‑140 (MQ=255)
                                                                          aacggaacggTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCa                                                            <  1:545638/140‑1 (MQ=255)
                                                                           acggaacggTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCaa                                                           <  2:967696/140‑1 (MQ=255)
                                                                            cggaacggTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAAc                                                          <  1:801288/140‑1 (MQ=255)
                                                                            cggaacggTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAAc                                                          <  2:1222294/140‑1 (MQ=255)
                                                                               aacggTACACGGTGAAGTTTATCGTATTGATAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGAc                                                       <  2:1282637/140‑1 (MQ=255)
                                                                               aacggTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGAc                                                       <  1:1072484/140‑1 (MQ=255)
                                                                                     acgcGGTGAAGTTTAGCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTGGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCg                                                 <  1:968445/137‑1 (MQ=255)
                                                                                      cacGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGa                                                >  2:981100/1‑140 (MQ=255)
                                                                                      cacGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGa                                                >  2:586628/1‑140 (MQ=255)
                                                                                      cacGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGa                                                <  2:1252768/140‑1 (MQ=255)
                                                                                            gAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTGCGTTTATCAACGACCCGTCGATGGAtt                                          >  1:1157235/1‑140 (MQ=255)
                                                                                            gAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGAtt                                          <  2:1007546/140‑1 (MQ=255)
                                                                                              aGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGAc                                                       >  1:761638/1‑125 (MQ=255)
                                                                                              aGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGAc                                                       <  2:761638/125‑1 (MQ=255)
                                                                                              aGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTaa                                        >  2:28785/1‑140 (MQ=255)
                                                                                              aGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTaa                                        >  1:304611/1‑140 (MQ=255)
                                                                                                   aTCGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTa                                   >  1:1185701/1‑140 (MQ=255)
                                                                                                     cGTATTGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAAt                                 >  2:23428/1‑140 (MQ=255)
                                                                                                          tGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGAt                                           <  2:660047/125‑1 (MQ=255)
                                                                                                          tGACAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGAt                                           >  1:660047/1‑125 (MQ=255)
                                                                                                            aCAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAgc                          >  2:1112150/1‑140 (MQ=255)
                                                                                                            aCAACGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAgc                          <  2:391031/140‑1 (MQ=255)
                                                                                                                cGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAgcggcg                      <  2:304611/140‑1 (MQ=255)
                                                                                                                cGCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGCGAGTGCATGGATGTACGTCTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAgcggcg                      <  2:1213584/140‑1 (MQ=255)
                                                                                                                 gCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGa                     <  1:501148/140‑1 (MQ=255)
                                                                                                                 gCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGa                     <  1:28785/140‑1 (MQ=255)
                                                                                                                 gCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGa                     >  1:320579/1‑140 (MQ=255)
                                                                                                                 gCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGa                     <  1:586628/140‑1 (MQ=255)
                                                                                                                 gCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGa                     >  1:683913/1‑140 (MQ=255)
                                                                                                                 gCCACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGa                     <  1:981100/140‑1 (MQ=255)
                                                                                                                   cACGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACt                   >  1:249556/1‑140 (MQ=255)
                                                                                                                    aCGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTg                  >  1:173212/1‑140 (MQ=255)
                                                                                                                     cGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTgg                 >  1:1123892/1‑140 (MQ=255)
                                                                                                                     cGCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTgg                 >  2:785816/1‑140 (MQ=255)
                                                                                                                      gCTGGCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGt                <  1:996393/140‑1 (MQ=255)
                                                                                                                         ggCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAg             <  1:1121623/140‑1 (MQ=255)
                                                                                                                         ggCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAg             <  1:136325/140‑1 (MQ=255)
                                                                                                                          gCCGAGCTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAGCGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGa            <  1:31734/140‑1 (MQ=255)
                                                                                                                          gCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGa            <  2:754597/140‑1 (MQ=255)
                                                                                                                          gCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGa            <  2:958067/140‑1 (MQ=255)
                                                                                                                          gCCGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGa            <  1:35842/140‑1 (MQ=255)
                                                                                                                           ccGAACTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGAc           <  1:785816/140‑1 (MQ=255)
                                                                                                                               aCTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGACAggg       <  2:320579/140‑1 (MQ=255)
                                                                                                                               aCTTGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGACAggg       <  2:1185701/140‑1 (MQ=255)
                                                                                                                                 ttGATGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATAGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGACAGGGAt     <  2:1190494/140‑1 (MQ=255)
                                                                                                                                    aTGTCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGACAGGGATAAg  >  2:595837/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                        
AGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGCCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGACAGGGATAAG  >  NC_000913/4447961‑4448232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: