Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,321,743	T→C	G567G (GGT→GGC)	atoS →	sensory histidine kinase AtoS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,321,743	0	T	C	100.0%	267.7 / NA	76	G567G (GGT→GGC)	atoS	sensory histidine kinase AtoS
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/35);  total (41/35)

GCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACT  >  NC_000913/2321607‑2321871                                                                                                                                          |                                                                                                                                 gCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTg                                                                                                                               >  1:1254987/1‑140 (MQ=255)  cATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTgg                                                                                                                              >  2:1226170/1‑140 (MQ=255)          ccTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGCCAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGt                                                                                                                      <  2:1254987/140‑1 (MQ=255)               cAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAAc                                                                                                                  >  1:634368/1‑140 (MQ=255)                 aTACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGca                                                                                                               <  1:793108/140‑1 (MQ=255)                     aGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGcatcat                                                                                                           <  2:505096/140‑1 (MQ=255)                     aGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGcatcat                                                                                                           <  1:936164/140‑1 (MQ=255)                        gACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTaa                                                                                                        >  1:560608/1‑140 (MQ=255)                         aCTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAAt                                                                                                       >  1:160606/1‑140 (MQ=255)                         aCTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAAt                                                                                                       >  1:1291695/1‑140 (MQ=255)                            cacaACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATg                                                                                                      <  2:547276/138‑1 (MQ=255)                            cacaACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATg                                                                                                      >  1:547276/1‑138 (MQ=255)                            cacaACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGcc                                                                                                    <  2:1291695/140‑1 (MQ=255)                            cacaACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGcc                                                                                                    >  1:1272964/1‑140 (MQ=255)                               aacaGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCAt                                                                                                 <  1:861512/140‑1 (MQ=255)                               aacaGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCAt                                                                                                 <  2:356055/140‑1 (MQ=255)                                acaGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATc                                                                                                >  2:945643/1‑140 (MQ=255)                                    gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAAt                                                                                                       <  1:859065/129‑1 (MQ=255)                                    gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAAt                                                                                                       >  2:859065/1‑129 (MQ=255)                                    gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCa                                                                                                  <  1:1096011/134‑1 (MQ=255)                                    gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCa                                                                                                  >  2:1096011/1‑134 (MQ=255)                                    gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCAt                                                                                                 <  2:76181/135‑1 (MQ=255)                                    gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCAt                                                                                                 >  1:76181/1‑135 (MQ=255)                                    gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAggg                                                                                            >  1:527651/1‑140 (MQ=255)                                    gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAggg                                                                                            >  1:406209/1‑140 (MQ=255)                                         ttCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCATCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGata                                                                                       >  1:1308723/1‑140 (MQ=255)                                           cGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATAtt                                                                                     >  2:605421/1‑140 (MQ=255)                                             aTAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTcg                                                                                   <  2:786141/140‑1 (MQ=255)                                              tAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAATCAACGCATCATTAATGCCCATCAGGGTGATATTcgc                                                                                  >  1:236706/1‑140 (MQ=255)                                               agagGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTcgcg                                                                                 >  2:824371/1‑140 (MQ=255)                                                   gACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGc                                                                             >  1:607042/1‑140 (MQ=255)                                                   gACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGc                                                                             >  2:902924/1‑140 (MQ=255)                                                   gACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGc                                                                             >  1:340962/1‑140 (MQ=255)                                                       aCGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGt                                                                         <  1:281521/140‑1 (MQ=255)                                                                   ttGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTAc                                                             >  1:851824/1‑140 (MQ=255)                                                                          ctcGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCaa                                                      >  1:329424/1‑140 (MQ=255)                                                                          ctcGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCaa                                                      >  1:545358/1‑140 (MQ=255)                                                                          ctcGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCaa                                                      >  2:739235/1‑140 (MQ=255)                                                                                gC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCa                                                >  1:704380/1‑140 (MQ=255)                                                                                 c‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCAc                                               >  1:1329109/1‑140 (MQ=255)                                                                                 c‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCAc                                               <  2:1272964/140‑1 (MQ=255)                                                                                   aaaaaaaGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACg                                              >  2:313082/1‑140 (MQ=255)                                                                                   aaaaaaaGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACg                                              <  2:704380/140‑1 (MQ=255)                                                                                     aaaaaGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCt                                            <  1:739235/140‑1 (MQ=255)                                                                                            tCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTa                                     >  2:647443/1‑140 (MQ=255)                                                                                            tCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTa                                     >  2:897102/1‑140 (MQ=255)                                                                                              ttCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTAcc                                   >  2:931410/1‑140 (MQ=255)                                                                                                 gATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGAt                                <  2:851824/140‑1 (MQ=255)                                                                                                   tCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCa                              <  2:527651/140‑1 (MQ=255)                                                                                                      cTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAAcc                           <  1:897102/140‑1 (MQ=255)                                                                                                       tttttCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAAccc                          >  2:1191444/1‑140 (MQ=255)                                                                                                       tttttCACCACCAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAAccc                          >  2:4266/1‑140 (MQ=255)                                                                                                             accaccAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAggg                    >  1:120923/1‑140 (MQ=255)                                                                                                             accaccAAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAggg                    >  2:1035709/1‑140 (MQ=255)                                                                                                             accaccAAAGCCTCAGGAACCGGGCTTGGCATGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGAGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACACGCAggg                    >  2:360795/1‑140 (MQ=255)                                                                                                               caccaAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGaa                  >  1:49703/1‑140 (MQ=255)                                                                                                                accaAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGaaa                 <  2:1021943/140‑1 (MQ=255)                                                                                                                accaAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGaaa                 <  2:120923/140‑1 (MQ=255)                                                                                                                 ccaAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAAt                <  1:605421/140‑1 (MQ=255)                                                                                                                  caAAGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATc               >  1:195301/1‑140 (MQ=255)                                                                                                                   aaaGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACTGATCAACCCGCAGGGAAATCa              <  2:975882/140‑1 (MQ=255)                                                                                                                   aaaGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCa              <  2:340962/140‑1 (MQ=255)                                                                                                                    aaGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAg             >  1:921307/1‑140 (MQ=255)                                                                                                                     aGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGa            <  2:406209/140‑1 (MQ=255)                                                                                                                     aGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGa            <  1:647443/140‑1 (MQ=255)                                                                                                                     aGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGa            <  1:902924/140‑1 (MQ=255)                                                                                                                     aGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGa            <  2:329424/140‑1 (MQ=255)                                                                                                                     aGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGa            <  2:545358/140‑1 (MQ=255)                                                                                                                     aGCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGa            <  2:49703/140‑1 (MQ=255)                                                                                                                      gCCTCAGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGAc           >  2:14383/1‑140 (MQ=255)                                                                                                                           aGGAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTAt      <  2:160606/140‑1 (MQ=255)                                                                                                                             gAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGa    <  1:1035709/140‑1 (MQ=255)                                                                                                                             gAACCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGa    <  1:313082/140‑1 (MQ=255)                                                                                                                               aCCGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACt  <  1:945643/140‑1 (MQ=255)                                                                                                                                ccGGGCTTGGCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTAt      >  1:836269/1‑135 (MQ=255)                                                                                                                                ccGGGCTTGCCCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTAt      <  2:836269/135‑1 (MQ=255)                                                                                                                                          |                                                                                                                                 GCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGACT  >  NC_000913/2321607‑2321871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑