Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,782,569	C→T	R53Q (CGA→CAA)	ypjA ←	adhesin‑like autotransporter YpjA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,782,569	0	C	T	100.0%	349.3 / NA	96	R53Q (CGA→CAA)	ypjA	adhesin‑like autotransporter YpjA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (50/46);  total (50/46)

AGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAA  >  NC_000913/2782436‑2782703                                                                                                                                      |                                                                                                                                       aGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCAt                                                                                                                                  <  1:634088/140‑1 (MQ=255) aGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCAt                                                                                                                                  >  1:254477/1‑140 (MQ=255)    cTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATc                                                                                                                                 >  1:830848/1‑138 (MQ=255)    cTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATc                                                                                                                                 <  2:830848/138‑1 (MQ=255)    cTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCa                                                                                                                               >  2:686046/1‑140 (MQ=255)       ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACtt                                                                                                                            >  1:852200/1‑140 (MQ=255)       ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACtt                                                                                                                            >  1:663725/1‑140 (MQ=255)       ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACtt                                                                                                                            >  2:507716/1‑140 (MQ=255)       ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACtt                                                                                                                            >  1:776765/1‑140 (MQ=255)       ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACtt                                                                                                                            >  1:516307/1‑140 (MQ=255)       ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACtt                                                                                                                            >  2:384014/1‑140 (MQ=255)       ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACtt                                                                                                                            >  2:210458/1‑140 (MQ=255)       ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACtt                                                                                                                            >  1:186934/1‑140 (MQ=255)         ccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACtttt                                                                                                                          >  1:415773/1‑140 (MQ=255)            caAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTgg                                                                                                                       <  2:186934/140‑1 (MQ=255)            aaaaaTTTTTATGACTTCCTATATCTTGATATCCACCGGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTgg                                                                                                                       <  2:752210/139‑1 (MQ=255)            aaaaaTTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTgg                                                                                                                       <  1:210458/139‑1 (MQ=255)              aaaTTGTTATGCCTTCCTATATCTTAATATCCACCAGATTCAATAAGCCTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGtt                                                                                                                     <  2:796389/140‑1 (MQ=255)              aaaTTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGtt                                                                                                                     <  1:372698/140‑1 (MQ=255)               aaTTGTTATGATTTCCTATATTTTAATATCAGACAGATCAAATAAGCCTTCAATTACACACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTg                                                                                                                    <  2:852200/140‑1 (MQ=255)                   gTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCAt                                                                                                                <  1:507716/140‑1 (MQ=255)                      aTGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTa                                                                                                             <  1:265393/140‑1 (MQ=255)                        gACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACACCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACa                                                                                                           <  1:242063/140‑1 (MQ=255)                         aCTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATc                                                                                                               <  2:442335/135‑1 (MQ=255)                         aCTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATc                                                                                                               >  1:442335/1‑135 (MQ=255)                           ttCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGtc                                                                                                        >  2:610699/1‑140 (MQ=255)                              cTATATCTTAATATCCACCAGATTAAATAAGACTTCAATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCa                                                                                                     <  2:82001/140‑1 (MQ=255)                                     ttGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTa                                                                                              >  2:171622/1‑140 (MQ=255)                                      tGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAc                                                                                             <  2:755302/140‑1 (MQ=255)                                      tGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAc                                                                                             >  2:585831/1‑140 (MQ=255)                                       gATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAcc                                                                                            >  2:529535/1‑140 (MQ=255)                                       gATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAcc                                                                                            >  1:12550/1‑140 (MQ=255)                                       gATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAcc                                                                                            >  2:831530/1‑140 (MQ=255)                                       gATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAcc                                                                                            >  1:163846/1‑140 (MQ=255)                                       gATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAcc                                                                                            >  1:419913/1‑140 (MQ=255)                                       gATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAcc                                                                                            >  1:41559/1‑140 (MQ=255)                                        atatCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACca                                                                                           >  1:127160/1‑140 (MQ=255)                                        atatCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACca                                                                                           <  1:610699/140‑1 (MQ=255)                                        atatCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACca                                                                                           >  1:512088/1‑140 (MQ=255)                                        atatCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACca                                                                                           >  1:377624/1‑140 (MQ=255)                                        atatCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTA‑TTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACcac                                                                                          >  1:739343/1‑140 (MQ=255)                                            ccaccaGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACAcc                                                                                       <  2:529213/140‑1 (MQ=255)                                             caccaGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACca                                                                                           >  1:169216/1‑135 (MQ=255)                                             caccaGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACca                                                                                           <  2:169216/135‑1 (MQ=255)                                             caccaGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCa                                                                                      >  1:836900/1‑140 (MQ=255)                                              accaGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCaa                                                                                     >  1:788682/1‑140 (MQ=255)                                               ccaGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAAt                                                                                    <  2:742871/140‑1 (MQ=255)                                                   aTTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACa                                                                                >  2:483806/1‑140 (MQ=255)                                                   aTTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACa                                                                                >  1:588277/1‑140 (MQ=255)                                                   aTTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACa                                                                                <  2:588277/140‑1 (MQ=255)                                                        aTAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATtagt                                                                           >  1:236299/1‑140 (MQ=255)                                                                 ccATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGc                                                                  >  2:853336/1‑140 (MQ=255)                                                                  cATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCa                                                                 <  1:831530/140‑1 (MQ=255)                                                                  cATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTA‑TTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAg                                                                <  2:739343/140‑1 (MQ=255)                                                                         tACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATcc                                                          <  1:806511/140‑1 (MQ=255)                                                                          aCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATccc                                                         >  1:57259/1‑140 (MQ=255)                                                                             ccGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCcggg                                                      <  2:12550/140‑1 (MQ=255)                                                                             ccGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCcggg                                                      <  2:41559/140‑1 (MQ=255)                                                                              cGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCcgggc                                                     <  1:529535/140‑1 (MQ=255)                                                                              cGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCcgggc                                                     <  2:236299/140‑1 (MQ=255)                                                                               gCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCcgggcg                                                    <  1:171622/140‑1 (MQ=255)                                                                               gCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCcgggcg                                                    <  2:512088/140‑1 (MQ=255)                                                                               gCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCcgggcg                                                    <  1:686046/140‑1 (MQ=255)                                                                               gCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCcgggcg                                                    <  2:788682/140‑1 (MQ=255)                                                                                   tGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGc                                                <  1:585831/140‑1 (MQ=255)                                                                                    gAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCa                                               <  2:254477/140‑1 (MQ=255)                                                                                    gAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCa                                               <  1:781949/140‑1 (MQ=255)                                                                                      aCATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCata                                             >  2:120873/1‑140 (MQ=255)                                                                                         ttCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCatatat                                          >  1:464702/1‑140 (MQ=255)                                                                                              ctgGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAgg                                     >  1:773282/1‑140 (MQ=255)                                                                                              ctgGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAgg                                     <  2:773282/140‑1 (MQ=255)                                                                                                 gCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAg                                  >  2:270471/1‑140 (MQ=255)                                                                                                 gCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGG‑TCCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGa                                 <  2:415773/140‑1 (MQ=255)                                                                                                  ccATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGa                                 <  2:516307/140‑1 (MQ=255)                                                                                                  ccATGGTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGa                                 <  1:65597/140‑1 (MQ=255)                                                                                                      ggTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGat                                <  1:421341/137‑1 (MQ=255)                                                                                                      ggTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGat                                >  2:421341/1‑137 (MQ=255)                                                                                                      ggTTGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATc                             >  1:340084/1‑140 (MQ=255)                                                                                                         tGATAATATGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAAt                          <  1:691107/140‑1 (MQ=255)                                                                                                           ataataTGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAAt                          <  1:153380/138‑1 (MQ=255)                                                                                                           ataataTGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAAt                          >  2:153380/1‑138 (MQ=255)                                                                                                                 tGAGTGTTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAg                  >  2:432142/1‑140 (MQ=255)                                                                                                                     tgtTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACt              >  1:622665/1‑140 (MQ=255)                                                                                                                      gtTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTAcgg             >  2:797411/1‑138 (MQ=255)                                                                                                                      gtTATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTg             >  2:309637/1‑140 (MQ=255)                                                                                                                        tATTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAg           >  2:492625/1‑140 (MQ=255)                                                                                                                         aTTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgc          >  1:349311/1‑140 (MQ=255)                                                                                                                         aTTTGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgc          >  2:203595/1‑140 (MQ=255)                                                                                                                          tttGTTGTACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgcg         >  2:618157/1‑140 (MQ=255)                                                                                                                            tgttgtACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgcggc       <  1:483806/140‑1 (MQ=255)                                                                                                                            tgttgtACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgcggc       <  1:238124/140‑1 (MQ=255)                                                                                                                             gttgtACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAgcggcg      >  2:232288/1‑140 (MQ=255)                                                                                                                                gtACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACa   <  1:797411/140‑1 (MQ=255)                                                                                                                                gtACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACa   <  1:309637/140‑1 (MQ=255)                                                                                                                                gtACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACa   <  1:303991/140‑1 (MQ=255)                                                                                                                                 tACCTTGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACaa  <  2:776765/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                       AGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCATCCCGGGCGGGGCATATATCAAGGCAGATATCAATAAGGAAAGTACTGAGCGGCGACAA  >  NC_000913/2782436‑2782703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑