| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,469,515 | IS5 (–) +4 bp | coding (385‑388/1332 nt) | yfdI → | CPS‑53 (KpLE1) prophage; serotype specific glucosyl transferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 58 (1.350) | 40/276 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2469518 | 0 (0.000) | coding (388/1332 nt) | yfdI | CPS‑53 (KpLE1) prophage; serotype specific glucosyl transferase | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 55 (1.280) | 34/276 | 0.2 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2469515 = | 0 (0.000) | coding (385/1332 nt) | yfdI | CPS‑53 (KpLE1) prophage; serotype specific glucosyl transferase | |||||
GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289057‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGATAACACCCTAGCATCAAGATATTCAGTAAAAATG < NC_000913/2469518‑2469382 GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGCCTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCC > 1:437374/1‑140GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCGCCTTCCC < 2:416626/140‑1GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCC < 1:17139/140‑1 GATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCT < 1:684515/140‑1 ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTA < 2:209090/140‑1 ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTA < 2:612533/140‑1 AACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAA > 1:513478/1‑140 GCCTTAAATGGCGAAGAAACGGTCTATATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAACAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATA < 2:645474/140‑1 GCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCCGCTTATTCGCACCTTCCCTAAAAT > 1:194630/1‑140 CTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAA > 2:552177/1‑140 TAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGA > 1:476363/1‑140 TAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAA > 2:193047/1‑132 TAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAA < 1:193047/132‑1 AAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAA < 2:667852/140‑1 AATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCGCCTTCCCTAAAATAAAGAAT < 2:278309/140‑1 CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAA > 1:32121/1‑140 CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAA < 1:349912/140‑1 AGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAA < 2:417846/140‑1 GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTG > 1:84820/1‑140 GCTGATTCAAGGCATTCACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATA < 2:547237/122‑1 GCTGATTCAAGGCATTCACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATA > 1:547237/1‑122 CTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGT > 1:316870/1‑140 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTT > 2:172947/1‑140 TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTT > 2:183031/1‑140 TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTT > 2:8684/1‑140 TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTT > 2:213432/1‑140 TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTT > 2:512664/1‑140 AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATAT < 1:4400/140‑1 GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATAT < 2:476363/140‑1 GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATAT < 2:218154/140‑1 GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATAT < 1:213432/140‑1 TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAA > 1:667054/1‑140 TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAG > 2:243946/1‑140 TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATAT < 1:234226/136‑1 TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATAT > 2:234226/1‑136 CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAA < 2:196695/140‑1 GGAGAAAAAATCGGCTCAAACATGAAGAAACGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAAT > 2:37884/1‑140 GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATA < 1:241879/140‑1 AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATAT > 1:688886/1‑140 AAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGC < 1:172947/140‑1 GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATG < 1:8684/140‑1 CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAA < 1:547526/137‑1 CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAA > 2:547526/1‑137 CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAA < 2:194630/140‑1 CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAAT < 1:183031/140‑1 AATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTT > 1:474183/1‑140 ATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTA < 1:552177/140‑1 AGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAA > 2:656655/1‑140 CAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGA < 2:283772/140‑1 CAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGA > 1:242865/1‑140 AGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGAT < 1:332166/140‑1 GCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGCTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGATA > 2:102132/1‑140 CCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGATAA < 2:19235/140‑1 CCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGATAA < 2:688886/140‑1 GAAGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGATAACACC < 1:243946/140‑1 AGAATTT‑CCCCGCTTATTCGCACCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGATAACACCCT > 1:176960/1‑140 CCTTCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGATAACACCCTAGCATCAAGATATTCAGTAAAA > 2:522742/1‑140 TCCCTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGATAACACCCTAGCATCAAGATATTCAGTAAAAATG > 1:44595/1‑140 GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTT‑CCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289057‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAAATAAAGAATGTAAATAAAGTTACATACCTTTCTGTTTTTATATATGAAGTAAATATCGCATATAATGAATAAATATATATTACTTTTAGAAATAACGATAACACCCTAGCATCAAGATATTCAGTAAAAATG < NC_000913/2469518‑2469382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |