Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 218,588 T→G N63T (AAC→ACC)  proS ← proline‑‑tRNA ligase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913218,5880TG100.0% 64.1 / NA 19N63T (AAC→ACC) proSproline‑‑tRNA ligase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (10/9);  total (10/9)

GAACGGACGCTCGCCACGGTCAACAAAACGCAGCAGTTCCGGACCGTACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGTTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGTATATAACCCGGAGGCCAGCTTGCGGATCATCCCGGCGCGCAGCATCAGCTGATGGCTGATCACCTCGGC  >  NC_000913/218464‑218724
                                                                                                                            |                                                                                                                                        
gAACGGACGCTCGCCACGGTCAACAAAACGCAGCAGTTCCGGACCGTACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTcac                                                                                                                           >  1:36833/1‑140 (MQ=255)
 aaCGGACGCTCGCCACGGTCAACAAAACGCAGCAGTTCCGGACCGTACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTcacg                                                                                                                          <  1:171920/140‑1 (MQ=255)
      aCGCTCGCCACGGTCAACAAAACGCAGCAGTTCCGGACCGTACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGa                                                                                                                     >  2:56753/1‑140 (MQ=255)
       cGCTCGCCACGGTCAACAAAACGCAGCAGTTCCGGACCGTACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGAt                                                                                                                    >  1:383226/1‑140 (MQ=255)
                             gcagcaGTTCCGGACCGTACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAAcg                                                                                              >  1:172510/1‑140 (MQ=255)
                               agcagTTCCGGACCGTACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAAcgcg                                                                                            <  2:36833/140‑1 (MQ=255)
                                          aCCGTACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCg                                                                                 <  2:172510/140‑1 (MQ=255)
                                              tACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAg                                                                             >  2:310961/1‑140 (MQ=255)
                                               aCTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGc                                                                            <  2:34665/140‑1 (MQ=255)
                                               aCTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGc                                                                            <  2:383226/140‑1 (MQ=255)
                                                cTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGcc                                                                           <  2:417722/140‑1 (MQ=255)
                                                      ccAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGtat                                                                     >  1:321777/1‑140 (MQ=255)
                                                             ccACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGTATATAAccc                                                              >  2:425235/1‑140 (MQ=255)
                                                                       gCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGTATATAACCCGGAGGCCAGc                                                    >  1:98740/1‑140 (MQ=255)
                                                                           caAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGTATATAACCCGGAGGCCAGCTTGc                                                >  1:446372/1‑140 (MQ=255)
                                                                            aaaTCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGTATATAACCCGGAGGCCAGCTTGCg                                               <  1:425235/140‑1 (MQ=255)
                                                                                 ggctggctGAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGGATATAACCCGGAGGCCAGCTTGCGGatca                                          >  1:186165/1‑140 (MQ=255)
                                                                                       ctgAACCACCGGCATCGACACCTCGATCGCACCGGCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGTATATAACCCGGAGGCCAGCTTGCGGATCATCCCgg                                    <  1:310961/140‑1 (MQ=255)
                                                                                                                         gCGGTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGTATATAACCCGGAGGCCAGCTTGCGGATCATCCCGGCGCGCAGCATCAGCTGATGGCTGATCACCTCGGc  <  2:446372/140‑1 (MQ=255)
                                                                                                                            |                                                                                                                                        
GAACGGACGCTCGCCACGGTCAACAAAACGCAGCAGTTCCGGACCGTACTGTTCCCAACGACCACTCTCTTGCCACAAATCGGCTGGCTGAACCACCGGCATCGACACCTCGATCGCACCGGCGTTGTTCATCTCTTCACGCACGATGTTTTCGACTTTTTTCAGAACGCGCACGCCGGTCGGCAGCCAGGTATATAACCCGGAGGCCAGCTTGCGGATCATCCCGGCGCGCAGCATCAGCTGATGGCTGATCACCTCGGC  >  NC_000913/218464‑218724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: