| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,103,745 | (T)7→8 | intergenic (‑549/‑206) | csgD ← / → csgB | DNA‑binding transcriptional dual regulator CsgD/curlin, minor subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,103,738 | 1 | . | T | 98.6% | 244.6 / ‑3.8 | 70 | intergenic (‑542/‑213) | csgD/csgB | DNA‑binding transcriptional dual regulator CsgD/curlin, minor subunit |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base T (33/36); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.22e-01 | |||||||||||
AATTTTTTACTGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATA‑TTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACGCAGC > NC_000913/1103602‑1103868 | aaTTTTTTACTGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATA‑ttt > 2:538452/1‑140 (MQ=255) tttttACTGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATA‑ttt‑‑ttt < 2:1317217/140‑1 (MQ=255) tttACTGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATA‑ttt‑‑ttttt < 1:361525/140‑2 (MQ=255) tttACTGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATA‑ttt‑‑ttttt < 1:1346668/140‑2 (MQ=255) tttACTGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATA‑ttt‑‑ttttt < 1:926538/140‑2 (MQ=255) tACTGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATA‑ttt‑‑tttttgc < 2:1513275/140‑4 (MQ=255) tACTGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATA‑ttt‑‑tttttgc < 1:1016818/140‑4 (MQ=255) tGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTa > 2:1484578/1‑140 (MQ=255) cAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGa > 2:387963/1‑140 (MQ=255) aaaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGAt > 1:191372/1‑140 (MQ=255) aaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATaa < 1:568362/140‑1 (MQ=255) aGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACa < 2:1489711/140‑1 (MQ=255) aGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACa < 2:191372/140‑1 (MQ=255) aGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACa < 2:83055/140‑1 (MQ=255) cGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCg > 2:115410/1‑140 (MQ=255) gTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACg < 2:654267/140‑1 (MQ=255) gTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACg < 2:179128/140‑1 (MQ=255) gTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACg < 1:346382/140‑1 (MQ=255) cACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTg < 1:1466310/140‑1 (MQ=255) cACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTg < 1:387963/140‑1 (MQ=255) cTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTggg < 2:1180995/137‑1 (MQ=255) cTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTggg > 1:1180995/1‑137 (MQ=255) cTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTg < 2:101685/135‑1 (MQ=255) cTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTg > 1:101685/1‑135 (MQ=255) cTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGttt < 1:18451/140‑1 (MQ=255) tgtgCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTa > 1:830761/1‑140 (MQ=255) gtgCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACGGCGTATTTACGTGGGTTTTaa < 2:214272/140‑1 (MQ=255) gtgCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTg < 2:1495847/132‑1 (MQ=255) gtgCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTg > 1:1495847/1‑132 (MQ=255) gtgCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTaa < 1:1484578/140‑1 (MQ=255) tgCGCCAGACATATCGCCGCCATCAGCGCCGGGCAAGAAGAATGACTGTTTGGTGCTTTTTGATAGCGGAAAACCGGGATTTAAAAAAAAAAAAAAAATTTT‑‑TTTTGCGTAAATAACAGCGGATTTAAGTGGGGTTTAAt > 2:350759/1‑140 (MQ=255) tgCGCCAGACATATCGCAGCAAACAGCGACGGGAAAGAAGAATGACTGTCTGGTGCTTTTTTATAACGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAACGTATTTACGTGGGTTTTAAt > 2:786289/1‑140 (MQ=255) tgCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACg < 2:1347061/129‑1 (MQ=255) tgCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACg > 1:1347061/1‑129 (MQ=255) tgCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAAt > 2:275449/1‑140 (MQ=255) tgCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAAt > 2:1150552/1‑140 (MQ=255) gcAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACt < 1:538452/140‑1 (MQ=255) gcAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACt < 2:153613/140‑1 (MQ=255) gACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTA‑TTACGGGGGTTTTAATACTTTGGt > 2:433979/1‑140 (MQ=255) cATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTa > 1:947699/1‑140 (MQ=255) cATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTa < 2:965764/140‑1 (MQ=255) atCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGa > 1:1184126/1‑140 (MQ=255) agcaATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTa > 2:21368/1‑132 (MQ=255) agcaATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTa < 1:21368/132‑1 (MQ=255) agcaATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTaa > 1:1472420/1‑140 (MQ=255) caATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTaaaa > 2:764929/1‑140 (MQ=255) caATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTaaaa > 2:35588/1‑140 (MQ=255) caATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTaaaa < 2:1184126/140‑1 (MQ=255) cGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGaaaa > 1:1180047/1‑140 (MQ=255) cGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGaaaa < 2:412166/140‑1 (MQ=255) ggCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACa > 2:1224956/1‑140 (MQ=255) cAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAAc < 1:1048017/140‑1 (MQ=255) cAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAAc < 1:275449/140‑1 (MQ=255) gaagaaTGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAAcgcg < 2:944445/140‑1 (MQ=255) aTGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGt < 2:830761/140‑1 (MQ=255) tGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTg > 1:724509/1‑140 (MQ=255) tGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTg > 2:595001/1‑140 (MQ=255) aCTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCgg < 2:666189/135‑1 (MQ=255) aCTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCgg > 1:666189/1‑135 (MQ=255) tGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGtt > 2:1251670/1‑140 (MQ=255) tCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGttat > 2:747585/1‑140 (MQ=255) cTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGttatt < 1:595001/140‑1 (MQ=255) tGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGttatta > 2:747782/1‑140 (MQ=255) cTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAat > 2:97928/1‑140 (MQ=255) tttGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATAtt > 1:453604/1‑140 (MQ=255) tGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTc < 2:1444075/140‑1 (MQ=255) cGGAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGa > 1:1399562/1‑140 (MQ=255) gAAAACGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACa < 2:1180047/140‑1 (MQ=255) aaaCGGAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATa < 2:632737/140‑1 (MQ=255) ggAGATTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACttt > 2:1534381/1‑140 (MQ=255) gagaTTTAAAAGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTc < 1:345283/140‑1 (MQ=255) aGAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACg < 2:751770/140‑1 (MQ=255) gAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACGc < 1:1534381/140‑1 (MQ=255) gAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACGc < 1:350759/140‑1 (MQ=255) gAAAACAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACGc < 2:1472420/140‑1 (MQ=255) aaaCAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACGCAg > 2:758984/1‑140 (MQ=255) aaaCAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACGCAg > 1:1076266/1‑140 (MQ=255) aaCAAAATATTTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACGCAGc > 2:578143/1‑140 (MQ=255) aaaaaaTA‑TTTTGTTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACGCAGc > 2:1084820/3‑140 (MQ=255) | AATTTTTTACTGCAAAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAGAATGACTGTCTGGTGCTTTTTGATAGCGGAAAACGGAGATTTAAAAGAAAACAAAATA‑TTT‑‑TTTTGCGTAGATAACAGCGTATTTACGTGGGTTTTAATACTTTGGTATGAACTAAAAAAGAAAAATACAACGCGCGGGTGAGTTATTAAAAATATTTCCGCAGACATACTTTCCATCGTAACGCAGC > NC_000913/1103602‑1103868 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |