Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,101,5250CT30.2% 112.8 / 13.9 63intergenic (+95/‑165)sodA/kdgTsuperoxide dismutase (Mn)/2‑dehydro‑3‑deoxy‑D‑gluconate:H(+) symporter
Reads supporting (aligned to +/- strand):  ref base C (10/34);  new base T (19/0);  total (29/34)
Fisher's exact test for biased strand distribution p-value = 3.27e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCC  >  NC_000913/4101386‑4101661
                                                                                                                                           |                                                                                                                                         
aggAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTc                                                                                                                                           <  1:49821/138‑1 (MQ=255)
       gggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATaa                                                                                                                                   <  1:727933/140‑1 (MQ=255)
          aCGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTTGATCAATTTC‑aaa                                                                                                                                       >  1:1143685/1‑133 (MQ=255)
          aCGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑aaa                                                                                                                                       <  2:1143685/133‑1 (MQ=255)
             aaGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGTCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTT‑AAAATAAAAACaa                                                                                                                             >  1:733289/1‑140 (MQ=255)
             aaGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTT‑AAAATAAAAACaa                                                                                                                             >  2:909060/1‑140 (MQ=255)
             aaGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAAATTT‑aaaaaaaaaaact                                                                                                                             >  2:49821/1‑137 (MQ=255)
              agcagcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAAt                                                                                                                            <  2:17052/140‑1 (MQ=255)
              agcagcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAAt                                                                                                                            <  1:659125/140‑1 (MQ=255)
                  gcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTT‑AAAATAAAAAAAATGATc                                                                                                                        >  1:260435/1‑140 (MQ=255)
                   cGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATaaa                                                                                                                                  >  1:108296/1‑129 (MQ=255)
                   cGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATaaa                                                                                                                                  <  2:108296/129‑1 (MQ=255)
                      cACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGat                                                                                                                    <  2:563190/140‑1 (MQ=255)
                         gTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTT‑AAAATAAAAAAAAAGATCCGataaa                                                                                                                 >  2:31795/1‑140 (MQ=255)
                                   gAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAg                                                                                                       <  1:909060/140‑1 (MQ=255)
                                      aaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGt                                                                                                    <  2:15477/140‑1 (MQ=255)
                                          taatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCa                                                                                                <  1:1563829/140‑1 (MQ=255)
                                            atCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAAt                                                                                              <  1:1177515/140‑1 (MQ=255)
                                                 ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                                         <  2:171544/140‑1 (MQ=255)
                                                 ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                                         <  1:31795/140‑1 (MQ=255)
                                                 ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                                         <  1:1492140/140‑1 (MQ=255)
                                                 ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                                         <  2:746013/140‑1 (MQ=255)
                                                 ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGAtg                                                                                         <  2:518868/140‑1 (MQ=255)
                                                  tGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGGTCAATTTT‑AAAAAAAAAAAAAAGATCCGATAAAAATAAAAAAGCGGTTCAATTGAtgg                                                                                        >  2:1563829/1‑139 (MQ=255)
                                                   gccgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTT‑AAAATAAAAAAAATGATCCGATAAAAATAAAAAAACGTTTCAATTGAtgtg                                                                                       >  1:1142273/1‑140 (MQ=255)
                                                    ccgccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTT‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTgg                                                                                      >  1:561098/1‑140 (MQ=255)
                                                           ctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTATTTTTGATCAATTTT‑AAAATAAAAAAAAAGATCCGGTAAAAATAAAAAAGCGTTTCAATTTATGTGGGTTTGAt                                                                               >  2:1429249/1‑140 (MQ=255)
                                                             gagacagggCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCa                                                                             <  1:162362/133‑1 (MQ=255)
                                                              cAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCAc                                                                            <  2:912475/140‑1 (MQ=255)
                                                                 tGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTTGATCAATTTT‑AAAATAAAAAAAAAAATCCCATAAAAATAAAAAAACGTTTCAATTTATTTGGGTTTTATCACttt                                                                         >  2:943232/1‑140 (MQ=255)
                                                                 tGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTT‑AAAAAAAAAAAAAAAATTCGATAAAAAAAAAAAAACGGTTCAATTGATGTGGTTTTTATTACttt                                                                         >  2:774348/1‑140 (MQ=255)
                                                                   gggCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa                                                                       <  1:1557221/139‑1 (MQ=255)
                                                                   aGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa                                                                       <  2:1485083/140‑1 (MQ=255)
                                                                   aGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa                                                                       <  1:945986/140‑1 (MQ=255)
                                                                   aGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTa                                                                       <  1:959925/140‑1 (MQ=255)
                                                                      cGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGATCAATTTT‑AAAATAAAAACAAAGATCCGATAAAAATAAAACAGCGGTTCAATTGATGTGGTTTTTATCACTTTTAttt                                                                    >  1:644804/1‑139 (MQ=255)
                                                                        tataGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAAATTT‑AAAATAAAAAAAATGATCCGGTAAAAATAAAAAAGCGTTTTAATTTATGTGGTTTTTATTACTTTTTTTGAt                                                                  >  2:35217/1‑140 (MQ=255)
                                                                         ataGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGAtt                                                                 <  1:832459/140‑1 (MQ=255)
                                                                             gCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTT‑AAAATAAAAACAATGATCCGATAAAAATAAAAAAGCGTTTCAATTGATGTGGTTTTGATCACTTTTTTTGATTAaat                                                             >  1:91709/1‑140 (MQ=255)
                                                                             gCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGATCAATTTC‑AAAATAAAAACAAAGATCCGGTAAAAAAAAAAAAGCGTTTTAATTTATGGGGTTTTGATCACTTTTATTTATTaaaa                                                             >  2:959328/1‑139 (MQ=255)
                                                                               cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTT‑AAAAAAAAAAAAAAGATCCGATAAAAAAAAAAAAGCGTTTTAATTTATGTGGGTTTGATTACTTTTATTTATTAaatgc                                                           >  2:1557221/1‑139 (MQ=255)
                                                                               cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTC‑AAAAAAAAAACAAAGATCCGATAAAAAAAAAACAACGTTTCAATTGATGTGGTTTTGATTACTTttatttatctgtctc                                                           >  2:162362/1‑133 (MQ=255)
                                                                                 cATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTT‑AAAATAAAAAAAAAGATCCGATAAAAATAAAAAAACGTTTTAATTGATGTGGTTTTTATCACTTTTTTTTATTAaatgaat                                                         >  2:83122/1‑140 (MQ=255)
                                                                                 cATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatgaat                                                         <  2:597399/140‑1 (MQ=255)
                                                                                  atatCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATCAATTTC‑AAAATAAAAAAAATGATCCGATAAAAATAAAAAAGCGTTTCAATTGATGTGGTTTTGATCACTTTTTTTTATTAaatgaatg                                                        >  1:182368/1‑140 (MQ=255)
                                                                                         cTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATTAATTTT‑AAAATAAAAAAAAAGATCCGAAAAAAAAAAAACAGCGTTTTAATTTATGTGGGTTTTATTACTTTTTTTTATTAAATTAATGTCTATCt                                                 >  2:1124223/1‑140 (MQ=255)
                                                                                              aaaaTGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt                                            <  1:35217/140‑1 (MQ=255)
                                                                                              aaaaTGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGtt                                            <  1:943232/140‑1 (MQ=255)
                                                                                              aaaaTGAACCATCGCCAACGGCGGTGGGTTTTTTGTGATCAATTTT‑AAAAAAAAAAAAAAGATCCGATAAAAAAAAAAAAACGGTTTAATTTATGTGGGTTTGATCACTTTTATTGATTAAAAGAAAGTCTATCTTCGtt                                            >  2:741801/1‑140 (MQ=255)
                                                                                                   gAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTT‑AAAATAAAAAAAATGATCCGATAAAAATAAAAAAGCGTTTCAATTTATGTGGGTTTGATTACTTTTATTGATTAAATGAATGTCTATCTTTGTTTCCAt                                       >  2:881526/1‑140 (MQ=255)
                                                                                                   gAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCAt                                       <  2:1326605/140‑1 (MQ=255)
                                                                                                       cATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTCAAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCaa                                    <  2:672771/140‑1 (MQ=255)
                                                                                                         tCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAacac                                 <  2:91709/140‑1 (MQ=255)
                                                                                                                   cggTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCa                       <  1:1429249/140‑1 (MQ=255)
                                                                                                                      tggtTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTg                    <  1:959328/140‑1 (MQ=255)
                                                                                                                        gtTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAg                  <  1:83122/140‑1 (MQ=255)
                                                                                                                        gtTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAg                  <  2:1142273/140‑1 (MQ=255)
                                                                                                                           ttttttTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGaa               >  2:773235/1‑140 (MQ=255)
                                                                                                                                  gATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCa        >  1:736094/1‑140 (MQ=255)
                                                                                                                                  gATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCa        >  1:26161/1‑140 (MQ=255)
                                                                                                                                     cAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCa     <  2:733289/140‑1 (MQ=255)
                                                                                                                                      aaTTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAg    <  2:1464593/140‑1 (MQ=255)
                                                                                                                                        tttC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGcc  >  1:633972/1‑140 (MQ=255)
                                                                                                                                        tttC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGcc  >  1:737202/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                         
GTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATCAATTTC‑AAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCC  >  NC_000913/4101386‑4101661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑