| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,350,991 | G→A | P679S (CCG→TCG) | arcB ← | sensory histidine kinase ArcB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,350,991 | 0 | G | A | 98.1% | 362.5 / ‑2.6 | 105 | P679S (CCG→TCG) | arcB | sensory histidine kinase ArcB |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (49/54); total (50/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.62e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
CCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGATCATCGCGGTTAGCG > NC_000913/3350854‑3351125 | ccccGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATc > 2:818505/1‑140 (MQ=255) cccGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATcc > 1:800495/1‑140 (MQ=255) ccgccgCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCt < 1:532165/140‑1 (MQ=255) cgccgcACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTa < 1:1240405/140‑1 (MQ=255) cTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCg < 2:1329721/140‑1 (MQ=255) tttAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCga < 1:818505/140‑1 (MQ=255) tAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCgaga > 2:958434/1‑140 (MQ=255) aaTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGAt < 2:1488523/140‑1 (MQ=255) aaTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGAt > 1:11328/1‑140 (MQ=255) aTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATa < 2:1394930/140‑1 (MQ=255) aTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATa < 2:18748/140‑1 (MQ=255) aTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATa < 2:750869/140‑1 (MQ=255) aTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATa < 2:785456/140‑1 (MQ=255) aTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATa < 1:1358590/140‑1 (MQ=255) aTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATa < 2:910866/140‑1 (MQ=255) aTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATa < 1:1193184/140‑1 (MQ=255) ttATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTg < 2:1304472/140‑1 (MQ=255) aTGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGtt > 2:375756/1‑140 (MQ=255) aTGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGtt > 2:551740/1‑140 (MQ=255) ccttcctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGt > 2:1031416/1‑135 (MQ=255) ccttcctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGt < 1:1031416/135‑1 (MQ=255) ccttcctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAg < 1:958434/140‑1 (MQ=255) ccttcctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAg < 2:1119265/140‑1 (MQ=255) ttcctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCa < 1:764787/140‑1 (MQ=255) ttcctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCa > 2:1469170/1‑140 (MQ=255) tcctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCAt > 1:1222247/1‑140 (MQ=255) tcctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCAt > 2:1099112/1‑140 (MQ=255) tcctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCAt > 2:285401/1‑140 (MQ=255) ctCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATgg < 1:264400/140‑1 (MQ=255) aaTGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAatat > 2:670903/1‑140 (MQ=255) aTGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATc > 2:405059/1‑140 (MQ=255) tGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAg < 2:1517499/127‑1 (MQ=255) tGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAg > 1:1517499/1‑127 (MQ=255) tGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCg > 1:1362998/1‑140 (MQ=255) tGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCg > 1:407141/1‑140 (MQ=255) tGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCg > 2:981969/1‑140 (MQ=255) tGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCg > 1:314673/1‑140 (MQ=255) tGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCg > 1:1502869/1‑140 (MQ=255) tGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCg > 2:759398/1‑140 (MQ=255) tGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCg > 2:2036/1‑140 (MQ=255) gCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACGGTTCCAGCATGGGAATATCGa > 2:1477748/1‑140 (MQ=255) tttATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATg > 1:564611/1‑140 (MQ=255) tttATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATg > 1:918559/1‑140 (MQ=255) ttATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGc < 1:759398/140‑1 (MQ=255) aTCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCtt < 2:800495/140‑1 (MQ=255) aTCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCtt < 2:210245/140‑1 (MQ=255) aTCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCtt < 2:918559/140‑1 (MQ=255) aTCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCtt < 2:507929/140‑1 (MQ=255) aTCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCtt < 2:564611/140‑1 (MQ=255) tCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTc < 2:258533/140‑1 (MQ=255) tCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTc > 1:258533/1‑140 (MQ=255) cTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAGCCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTg < 1:375756/140‑1 (MQ=255) cTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTg < 1:1120905/140‑1 (MQ=255) cTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTg > 1:364216/1‑140 (MQ=255) cgcCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGAtt > 2:1145884/1‑140 (MQ=255) tCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTg > 2:1589845/1‑140 (MQ=255) gATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGAtt > 2:661937/1‑132 (MQ=255) gATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGAtt > 2:993970/1‑132 (MQ=255) gATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGAtt < 1:993970/132‑1 (MQ=255) gATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGAtt < 1:661937/132‑1 (MQ=255) tCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTgt < 1:162297/140‑1 (MQ=255) tCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTgt < 2:729423/140‑1 (MQ=255) cAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTgtcg < 2:1160727/140‑1 (MQ=255) cAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTgtcg < 2:407141/140‑1 (MQ=255) cAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTgt > 1:454497/1‑138 (MQ=255) cAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTgt < 2:454497/138‑1 (MQ=255) aGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTgtcgt < 1:551740/140‑1 (MQ=255) aGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTgtcgt < 1:1487891/140‑1 (MQ=255) aGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTgtcgt < 1:1477748/140‑1 (MQ=255) tGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTa < 1:1145884/140‑1 (MQ=255) tGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTa > 2:417907/1‑140 (MQ=255) ccGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCtca < 1:1469170/140‑1 (MQ=255) ccGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCtca < 2:1083164/140‑1 (MQ=255) ccGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCtca < 2:11328/140‑1 (MQ=255) ccGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCtca < 1:1369238/140‑1 (MQ=255) ccGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCtca < 2:150427/140‑1 (MQ=255) ccGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCtca < 1:1173245/140‑1 (MQ=255) ccGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCtca < 2:645359/140‑1 (MQ=255) cGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCtcat > 1:697220/1‑140 (MQ=255) gCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCa > 2:1160390/1‑123 (MQ=255) gCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCa < 1:1160390/123‑1 (MQ=255) atcatcTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCatcatc > 1:1016342/1‑140 (MQ=255) catcTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCt < 2:1222247/140‑1 (MQ=255) catcTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCt > 2:827790/1‑140 (MQ=255) cttctCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTggg < 2:1502869/140‑1 (MQ=255) cttctCAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTggg < 2:1618750/140‑1 (MQ=255) tcAAACACCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATc > 1:1316473/1‑140 (MQ=255) cacCGCTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGa < 2:733474/140‑1 (MQ=255) cTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTc > 1:21005/1‑140 (MQ=255) cTAACCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTc > 2:964906/1‑140 (MQ=255) aaCCCGTCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCtt > 1:624542/1‑140 (MQ=255) tCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGatcat > 2:865972/1‑140 (MQ=255) tCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGatcat > 1:641851/1‑140 (MQ=255) tCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGatcat > 2:1161608/1‑140 (MQ=255) tCGGTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGatcat > 2:405800/1‑140 (MQ=255) acagATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGATCATcg > 1:1243416/4‑140 (MQ=255) gTGATCAGCTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGATCATcgc > 2:73844/1‑140 (MQ=255) cTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGATCATCGCGGTTAgcg < 1:964906/140‑1 (MQ=255) cTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGATCATCGCGGTTAgcg > 2:909841/1‑140 (MQ=255) cTTCGATCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGATCATCGCGGTTAgcg < 2:1243416/140‑1 (MQ=255) | CCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGGTCCTACAAGTTCGAGATACTGTTCCAGCATGGGAATATCGAGCAATGCTTCTGATTTACTGTTCTCTTCTGTCGTCACCGTACTCTCCTCATCATCCTGGGTATCCCAGAATTTCTTGATCATCGCGGTTAGCG > NC_000913/3350854‑3351125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |