Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	264,878	A→G	V110A (GTC→GCC)	yafX ←	CP4‑6 prophage; protein YafX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	264,878	0	A	G	100.0%	319.8 / NA	91	V110A (GTC→GCC)	yafX	CP4‑6 prophage; protein YafX
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (49/42);  total (49/42)

CGGTCAGTCGATAATACGCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGAACGACCAGAT  >  NC_000913/264745‑265014                                                                                                                                      |                                                                                                                                         cGGTCAGTCGATAATACGCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCaa                                                                                                                                    <  1:478215/140‑1 (MQ=255)     cAGTCGATAATACGCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATAcc                                                                                                                                <  2:565838/140‑1 (MQ=255)        tCGATAATACGCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACctgc                                                                                                                             >  1:1437564/1‑140 (MQ=255)          gATAATACGCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACctgctg                                                                                                                           <  1:1183495/140‑1 (MQ=255)                 cGCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGc                                                                                                                    <  1:1318714/140‑1 (MQ=255)                  gCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCa                                                                                                                   >  1:520466/1‑140 (MQ=255)                  gCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCa                                                                                                                   <  1:963275/140‑1 (MQ=255)                  gCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCa                                                                                                                   <  2:281511/140‑1 (MQ=255)                  gCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGCACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGGAGCAATACCTGCTGCTTCTGCa                                                                                                                   >  2:1424198/1‑140 (MQ=255)                  gCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTATGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAAGCAGCAATACCTGCTGCTTCTGCa                                                                                                                   >  2:217012/1‑140 (MQ=255)                    aGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACt                                                                                                                 <  2:1116927/140‑1 (MQ=255)                          gCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCtt                                                                                                                        >  1:866915/1‑127 (MQ=255)                          gCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCtt                                                                                                                        <  2:866915/127‑1 (MQ=255)                          gCGTGAGCCTCTGGATGTTGCATGACATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCtt                                                                                                                        <  2:1600527/127‑1 (MQ=255)                          gCGTGAGCCTCTGGATGTTGCATGACATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCtt                                                                                                                        >  1:1600527/1‑127 (MQ=255)                            gTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTggg                                                                                                         <  2:790794/140‑1 (MQ=255)                              gAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCa                                                                                                       <  1:558962/140‑1 (MQ=255)                               aGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCAt                                                                                                      >  2:461493/1‑140 (MQ=255)                                   tctGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGtt                                                                                                  <  1:171718/140‑1 (MQ=255)                                        aTGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGt                                                                                             <  2:318732/140‑1 (MQ=255)                                            tGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAg                                                                                         >  1:1555448/1‑140 (MQ=255)                                            tGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAg                                                                                         >  2:1409453/1‑140 (MQ=255)                                            tGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAg                                                                                         >  1:555015/1‑140 (MQ=255)                                            tGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAg                                                                                         >  2:514433/1‑140 (MQ=255)                                              cATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGc                                                                                       >  1:1175225/1‑140 (MQ=255)                                                 ggCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTc                                                                                           <  1:849430/133‑1 (MQ=255)                                                 ggCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTc                                                                                           >  2:849430/1‑133 (MQ=255)                                                     tACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTaaa                                                                                >  1:234178/1‑140 (MQ=255)                                                      aCTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAAc                                                                               >  1:1233185/1‑140 (MQ=255)                                                       cTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACa                                                                              <  2:234178/140‑1 (MQ=255)                                                          ccGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGGTACCGTTCAGGCAGTTAAACAGAc                                                                           >  2:122506/1‑140 (MQ=255)                                                           cGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACg                                                                          >  2:710705/1‑140 (MQ=255)                                                           cGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACg                                                                          >  1:566712/1‑140 (MQ=255)                                                            gCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGc                                                                         >  2:1028364/1‑140 (MQ=255)                                                             cAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGcc                                                                        <  1:1404848/140‑1 (MQ=255)                                                             cAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGcc                                                                        <  2:43235/140‑1 (MQ=255)                                                             cAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGc                                                                         <  1:962974/139‑1 (MQ=255)                                                             cAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGc                                                                         >  2:962974/1‑139 (MQ=255)                                                                  ggTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGtc                                                                   >  1:569001/1‑140 (MQ=255)                                                                       tAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATc                                                              <  2:1233658/140‑1 (MQ=255)                                                                          tgtgCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGcc                                                                        <  1:60274/127‑1 (MQ=255)                                                                          tgtgCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGcc                                                                        >  2:60274/1‑127 (MQ=255)                                                                          tgtgCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGtt                                                           >  2:257747/1‑140 (MQ=255)                                                                            tgCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGcc                                                                        <  1:610794/125‑1 (MQ=255)                                                                            tgCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGcc                                                                        >  2:610794/1‑125 (MQ=255)                                                                            tgCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGt                                                         >  2:356258/1‑140 (MQ=255)                                                                              cGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCa                                                                <  1:1221570/131‑1 (MQ=255)                                                                              cGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCa                                                                >  2:1221570/1‑131 (MQ=255)                                                                              cGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCa                                                       >  2:1313407/1‑140 (MQ=255)                                                                              cGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCa                                                       <  2:566712/140‑1 (MQ=255)                                                                              cGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCa                                                       >  1:1254709/1‑140 (MQ=255)                                                                              cGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCa                                                       >  1:695580/1‑140 (MQ=255)                                                                                  cATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCt                                                   <  1:1320447/140‑1 (MQ=255)                                                                                  cATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCt                                                   >  2:430905/1‑140 (MQ=255)                                                                                    tCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCg                                                 >  1:217187/1‑140 (MQ=255)                                                                                         tCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGa                                            <  1:1371726/140‑1 (MQ=255)                                                                                           acaTTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACa                                          >  1:1317048/1‑140 (MQ=255)                                                                                               tCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATaaa                                      >  1:1192263/1‑140 (MQ=255)                                                                                                  gTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCgggg                                              >  2:1465113/1‑129 (MQ=255)                                                                                                  gTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCgggg                                              <  1:1465113/129‑1 (MQ=255)                                                                                                       gcaggcaTGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGcgccgc                              >  1:581981/1‑140 (MQ=255)                                                                                                       gcaggcaTGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGcgccgc                              >  1:871043/1‑140 (MQ=255)                                                                                                       gcaggcaTGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGcgccgc                              >  1:702831/1‑140 (MQ=255)                                                                                                        caggcaTGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCgccgcc                             >  1:40977/1‑140 (MQ=255)                                                                                                        caggcaTGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCgccgcc                             >  2:427316/1‑140 (MQ=255)                                                                                                           gcaTGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCAtt                          >  2:879497/1‑140 (MQ=255)                                                                                                             aTGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGc                        <  1:176740/140‑1 (MQ=255)                                                                                                             aTGGTGGCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGc                        >  2:392544/1‑140 (MQ=255)                                                                                                              tggtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCt                       <  2:1555448/140‑1 (MQ=255)                                                                                                              tggtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCt                       <  1:1313407/140‑1 (MQ=255)                                                                                                               ggtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTg                      <  2:1192263/140‑1 (MQ=255)                                                                                                               ggtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTg                      <  2:750787/140‑1 (MQ=255)                                                                                                               ggtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTg                      <  1:1570636/140‑1 (MQ=255)                                                                                                               ggtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTg                      >  2:1553787/1‑140 (MQ=255)                                                                                                                gtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGa                     >  1:1373527/1‑140 (MQ=255)                                                                                                                gtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGa                     >  1:495183/1‑140 (MQ=255)                                                                                                                gtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGa                     <  1:461493/140‑1 (MQ=255)                                                                                                                gtggCTATACGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGa                     >  1:180993/1‑140 (MQ=255)                                                                                                                     tataCGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGgtg                >  2:877284/1‑140 (MQ=255)                                                                                                                      ataCGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGgtgt               <  2:871043/140‑1 (MQ=255)                                                                                                                        aCGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAg             <  2:555015/140‑1 (MQ=255)                                                                                                                         cGCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGa            >  1:322838/1‑140 (MQ=255)                                                                                                                          gCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGaa           <  2:1254709/140‑1 (MQ=255)                                                                                                                          gCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGaa           <  2:695580/140‑1 (MQ=255)                                                                                                                          gCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGaa           <  1:404308/140‑1 (MQ=255)                                                                                                                          gCAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCACCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGaa           <  1:1409453/140‑1 (MQ=255)                                                                                                                           cAATCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGAAc          <  2:569001/140‑1 (MQ=255)                                                                                                                             aTCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGAACGa        >  1:964281/1‑140 (MQ=255)                                                                                                                             aTCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGAACGa        <  1:257747/140‑1 (MQ=255)                                                                                                                              tCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGAACGAc       >  1:438044/1‑140 (MQ=255)                                                                                                                              tCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGAACGAc       <  2:1175225/140‑1 (MQ=255)                                                                                                                              tCAGGCAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGAACGAc       >  1:705794/1‑140 (MQ=255)                                                                                                                                   cAGGCAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGAACGACCAGAt  <  1:427316/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                         CGGTCAGTCGATAATACGCAGAATGGCGTGAGCCTCTGGATGTTGCATGGCATACTCCCGCAGGCGGTAATAGTGTGCGGTCATCGCGTCACATTCTGTACGGCAGGCATGGTGGCTATACGCAATCAGGCAGACAGCAATACCTGCTGCTTCTGCACTCATTTGGGCATCGTTACCGTTCAGGCAGTTAAACAGACGCCATGTCTCATCGTTGTCAGGCTCGGGGGACATAAATGCGCCGCCATTGCTGAGGGTGTAGAACGACCAGAT  >  NC_000913/264745‑265014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑