| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,805,423 | G→A | G176G (GGC→GGT) | waaP ← | lipopolysaccharide core heptose (I) kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,805,423 | 0 | G | A | 99.4% | 543.8 / ‑5.1 | 153 | G176G (GGC→GGT) | waaP | lipopolysaccharide core heptose (I) kinase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (77/75); minor base T (0/1); total (77/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 153 total aligned reads displayed.
TTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTG > NC_000913/3805291‑3805558 | ttGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTaa < 1:1093473/140‑1 (MQ=255)ttGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTaa < 1:862619/140‑1 (MQ=255) tGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTaaa > 1:513243/1‑140 (MQ=255) cGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATg < 1:787005/140‑1 (MQ=255) cGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATg > 1:1620830/1‑140 (MQ=255) cGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATg > 1:117639/1‑140 (MQ=255) cGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATg > 2:1303487/1‑140 (MQ=255) tCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGc > 2:686163/1‑140 (MQ=255) tCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGc < 1:111406/140‑1 (MQ=255) aGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCaa > 1:343529/1‑140 (MQ=255) gCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAAt > 2:366295/1‑140 (MQ=255) atatTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAg > 1:1439655/1‑140 (MQ=255) aTTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCaaaaa > 1:999028/1‑140 (MQ=255) tgaGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGc < 2:606316/140‑1 (MQ=255) tgaGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGc > 1:842853/1‑140 (MQ=255) tgaGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGc > 1:918952/1‑140 (MQ=255) aaaTATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAAt > 2:65198/1‑140 (MQ=255) aaaTATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAAt > 2:676162/1‑140 (MQ=255) atatAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGt < 1:447758/140‑1 (MQ=255) taAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAAc > 1:39010/1‑140 (MQ=255) aaaCCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACa < 2:1250286/140‑1 (MQ=255) aaCCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAg > 2:1331429/1‑140 (MQ=255) aCCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCaaaa < 2:1332448/122‑1 (MQ=255) aCCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCaaaa > 1:1332448/1‑122 (MQ=255) cAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTcg > 2:578734/1‑140 (MQ=255) aTCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTcgcg > 1:927694/1‑140 (MQ=255) aTCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTcgcg < 1:1154053/140‑1 (MQ=255) tCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCgg > 1:408370/1‑140 (MQ=255) tCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCgg < 1:792618/140‑1 (MQ=255) gTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAt > 1:138277/1‑140 (MQ=255) tCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAtt < 2:343529/140‑1 (MQ=255) tCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAtt < 1:1185911/140‑1 (MQ=255) tCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAtt < 1:75540/140‑1 (MQ=255) tATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATc < 1:232946/140‑1 (MQ=255) aTCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATcc < 1:871876/140‑1 (MQ=255) aTCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATcc > 1:663100/1‑140 (MQ=255) cgcCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc > 2:1490846/1‑140 (MQ=255) cgcCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc > 1:1074719/1‑140 (MQ=255) cgcCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc > 1:1136052/1‑140 (MQ=255) cgcCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc > 2:864554/1‑140 (MQ=255) cgcCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc > 1:1315842/1‑140 (MQ=255) cgcCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc > 1:493920/1‑140 (MQ=255) cgcCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc > 1:466931/1‑140 (MQ=255) cgcCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc > 2:930151/1‑140 (MQ=255) aCTTTTGCACGTATTTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACg < 2:1581401/140‑1 (MQ=255) aCTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACg < 1:1528516/140‑1 (MQ=255) cTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGc < 2:1136052/140‑1 (MQ=255) cGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCa > 2:1080161/1‑136 (MQ=255) cGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGt < 2:1620830/140‑1 (MQ=255) cGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGt > 2:864348/1‑140 (MQ=255) cGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGt > 2:482051/1‑140 (MQ=255) cGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAATATGCATTTTACGCACCATAGt > 1:1537287/1‑140 (MQ=255) tATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTg > 2:748274/1‑140 (MQ=255) aTCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCa > 2:1016459/1‑133 (MQ=255) aTCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCa < 1:1016459/133‑1 (MQ=255) tgtgCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATa > 1:888981/1‑132 (MQ=255) tgCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTacac > 1:783091/1‑140 (MQ=255) tgCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTacac < 1:748274/140‑1 (MQ=255) gCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACg < 2:918952/140‑1 (MQ=255) cccGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGt < 1:1332961/140‑1 (MQ=255) cccGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAATATGCATTTTACGCACCATAGTTGCTACACGt < 2:1537287/140‑1 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg > 2:710087/1‑140 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg > 2:362590/1‑140 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg > 1:1287333/1‑140 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg > 2:740438/1‑140 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg > 2:1619587/1‑140 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg < 2:1287333/140‑1 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg > 2:759375/1‑140 (MQ=255) gATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCg < 2:795043/140‑1 (MQ=255) aTGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGa > 2:755739/1‑140 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTGTGCATTTTACGCACCATAGTTGCTACACGTGCGa < 2:492750/139‑1 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGt < 1:354628/135‑1 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGa > 1:561203/1‑139 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGa < 2:52319/139‑1 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGa < 2:561203/139‑1 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGAt > 2:133423/1‑140 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGAt < 1:633163/140‑1 (MQ=255) tGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGAt > 2:437378/1‑140 (MQ=255) aGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGAt < 1:763922/137‑1 (MQ=255) aGATCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGAt > 2:763922/1‑137 (MQ=255) tCGATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCAt < 1:437378/140‑1 (MQ=255) gATAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAGATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATa > 2:783174/1‑139 (MQ=255) tAACTGAAATTTTTAGTTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGc > 2:1149329/1‑140 (MQ=255) tAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGc > 2:1382280/1‑140 (MQ=255) tAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGc > 1:1583631/1‑140 (MQ=255) tAACTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGc > 2:779950/1‑140 (MQ=255) aCTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCtt < 1:996578/140‑1 (MQ=255) aCTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCtt < 2:434838/140‑1 (MQ=255) aCTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCtt < 1:686163/140‑1 (MQ=255) cTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTa < 2:663100/140‑1 (MQ=255) cTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTa < 2:30183/140‑1 (MQ=255) cTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTa < 1:710087/140‑1 (MQ=255) cTGAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTa < 1:1582924/140‑1 (MQ=255) gAAATTTTTAATTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAac > 1:284594/1‑140 (MQ=255) aaTTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATc > 2:1227483/1‑140 (MQ=255) actCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCa < 2:1100853/138‑1 (MQ=255) aTTCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCa < 1:1382280/140‑1 (MQ=255) tCATCTTCCCGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAgg < 1:1619587/140‑1 (MQ=255) cccGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTg > 1:464729/1‑140 (MQ=255) cccGACCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTg < 2:99838/140‑1 (MQ=255) | TTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTTGCTACACGTGCGATCAGCATACGCTTAACACGTATATCAGGCGGGTTG > NC_000913/3805291‑3805558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |