BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	303,948	A→G	S79P (TCC→CCC)	ykgJ ←	putative zinc‑ or iron‑chelating domain‑containing protein YkgJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	303,948	0	A	G	100.0%	399.3 / NA	110	S79P (TCC→CCC)	ykgJ	putative zinc‑ or iron‑chelating domain‑containing protein YkgJ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (57/53); total (57/53)

Only 100 of 111 total aligned reads displayed.

TATCGCTGGCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGACGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCG  >  NC_000913/303816‑304081

tatCGCTGGCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGcgatcga                                                                                                                                <  2:1423571/140‑1 (MQ=255)

tatCGCTGGCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGcgatcga                                                                                                                                <  1:963467/140‑1 (MQ=255)

tatCGCTGGCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGcgatcga                                                                                                                                <  1:1162826/140‑1 (MQ=255)

tatCGCTGGCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGcgatcga                                                                                                                                <  2:598229/140‑1 (MQ=255)

    gCTGGCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGcgatcga                                                                                                                                <  1:310561/136‑1 (MQ=255)

    gCTGGCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGcgatcga                                                                                                                                >  2:310561/1‑136 (MQ=255)

    gCTGGCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGAtttt                                                                                                                            <  1:865519/140‑1 (MQ=255)

       ggCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTtat                                                                                                                         >  2:40906/1‑140 (MQ=255)

         cGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTtatat                                                                                                                       >  1:1212430/1‑140 (MQ=255)

             gCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCg                                                                                                                   <  1:245995/140‑1 (MQ=255)

               aGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTg                                                                                                                 <  1:613643/140‑1 (MQ=255)

                 tGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATTGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTgca                                                                                                               <  1:696468/140‑1 (MQ=255)

                  gCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTgcag                                                                                                              >  1:789645/1‑140 (MQ=255)

                  gCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTgcag                                                                                                              >  1:1172989/1‑140 (MQ=255)

                   cAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTgcagc                                                                                                             >  2:707707/1‑140 (MQ=255)

                        aattaTTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCa                                                                                                        >  2:565636/1‑140 (MQ=255)

                                tATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGcc                                                                                                >  1:289978/1‑140 (MQ=255)

                                tATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGcc                                                                                                <  2:1172989/140‑1 (MQ=255)

                                tATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGcc                                                                                                >  1:203133/1‑140 (MQ=255)

                                  tGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCg                                                                                              >  1:728264/1‑140 (MQ=255)

                                  tGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCg                                                                                              <  2:1300564/140‑1 (MQ=255)

                                  tGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCg                                                                                              >  1:505016/1‑140 (MQ=255)

                                  tGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCg                                                                                              >  1:1517478/1‑140 (MQ=255)

                                  tGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCg                                                                                              >  1:678293/1‑140 (MQ=255)

                                     ttATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGccc                                                                                               >  2:323906/1‑136 (MQ=255)

                                     ttATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGccc                                                                                               <  1:323906/136‑1 (MQ=255)

                                     ttATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCgggg                                                                                           <  2:417690/140‑1 (MQ=255)

                                          aCGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCt                                                                                      >  1:38492/1‑140 (MQ=255)

                                            ggTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCATGTGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCt                                                                                      >  1:613297/1‑140 (MQ=255)

                                            ggTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGc                                                                                    <  2:89204/140‑1 (MQ=255)

                                             gtgtCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCa                                                                                   >  1:902321/1‑140 (MQ=255)

                                              tgtCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCaa                                                                                  >  1:84206/1‑140 (MQ=255)

                                              tgtCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCaa                                                                                  >  2:685416/1‑140 (MQ=255)

                                              tgtCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCaa                                                                                  >  1:314418/1‑140 (MQ=255)

                                              tgtCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCaa                                                                                  >  2:586664/1‑140 (MQ=255)

                                              tgtCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCaa                                                                                  >  1:157072/1‑140 (MQ=255)

                                               gtCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAg                                                                                 <  2:203133/140‑1 (MQ=255)

                                                tCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGcc                                                                                                <  1:368665/124‑1 (MQ=255)

                                                tCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAgg                                                                                >  2:630327/1‑140 (MQ=255)

                                                     ccGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAAt                                                                           <  2:84206/140‑1 (MQ=255)

                                                      cGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATa                                                                          <  1:586664/140‑1 (MQ=255)

                                                      cGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGACGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATa                                                                          >  1:251883/1‑140 (MQ=255)

                                                        tATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACa                                                                        >  1:1565728/1‑140 (MQ=255)

                                                        tATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACa                                                                        >  1:1038243/1‑140 (MQ=255)

                                                        tATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACa                                                                        >  2:17301/1‑140 (MQ=255)

                                                        tATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACa                                                                        >  1:280905/1‑140 (MQ=255)

                                                              gCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCgggg                                                                  >  1:337469/1‑140 (MQ=255)

                                                                   tGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGtttt                                                             >  1:628416/1‑140 (MQ=255)

                                                                   tGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGtttt                                                             >  2:460697/1‑140 (MQ=255)

                                                                    gCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGttttt                                                            <  1:1283973/140‑1 (MQ=255)

                                                                    gCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGttttt                                                            <  2:1212430/140‑1 (MQ=255)

                                                                    gCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGttttt                                                            <  2:280905/140‑1 (MQ=255)

                                                                    gCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGttttt                                                            <  2:289978/140‑1 (MQ=255)

                                                                    gCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGttttt                                                            <  2:323562/140‑1 (MQ=255)

                                                                         aTTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGttttt                                                            <  1:129146/135‑1 (MQ=255)

                                                                         aTTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGttttt                                                            >  2:129146/1‑135 (MQ=255)

                                                                          ttGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGAtt                                                      >  1:1010495/1‑140 (MQ=255)

                                                                             cAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGt                                                   >  1:1420850/1‑140 (MQ=255)

                                                                              aaGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTa                                                  >  1:243677/1‑140 (MQ=255)

                                                                               aGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTAc                                                 >  1:1393051/1‑140 (MQ=255)

                                                                                  cTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGttttt                                                            >  1:834205/1‑126 (MQ=255)

                                                                                  cTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGttttt                                                            <  2:834205/126‑1 (MQ=255)

                                                                                  cTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGc                                              >  2:827334/1‑140 (MQ=255)

                                                                                  cTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGc                                              <  1:827334/140‑1 (MQ=255)

                                                                                    cATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTc                                            >  2:1443389/1‑140 (MQ=255)

                                                                                     aTTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCa                                           >  2:1571695/1‑140 (MQ=255)

                                                                                     aTTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCa                                           >  1:782680/1‑140 (MQ=255)

                                                                                         acgacTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGct                                       <  2:728264/140‑2 (MQ=255)

                                                                                          cgacTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTAc                                                 <  2:82172/129‑1 (MQ=255)

                                                                                          cgacTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTAc                                                 >  1:82172/1‑129 (MQ=255)

                                                                                          cgacTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGTAt                                      >  2:1343851/1‑140 (MQ=255)

                                                                                          cgacTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCAt                                      <  1:630327/140‑1 (MQ=255)

                                                                                             cTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCgg                                   <  2:157072/140‑1 (MQ=255)

                                                                                              tCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGt                                  >  2:371291/1‑140 (MQ=255)

                                                                                              tCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGt                                  >  1:283788/1‑140 (MQ=255)

                                                                                               ccGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTg                                 >  2:104436/1‑140 (MQ=255)

                                                                                                     tcACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAgg                           >  2:1621632/1‑140 (MQ=255)

                                                                                                      cACCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAggg                          <  2:1051619/140‑1 (MQ=255)

                                                                                                       aCCAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAgggg                         >  1:1077305/1‑140 (MQ=255)

                                                                                                        ccAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGa                        <  2:789645/140‑1 (MQ=255)

                                                                                                        ccAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGa                        <  2:337469/140‑1 (MQ=255)

                                                                                                        ccAGACATGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGa                        <  1:1443389/140‑1 (MQ=255)

                                                                                                              aTGGCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTg                  <  1:565636/140‑1 (MQ=255)

                                                                                                                 gCGAATTCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTc               >  1:427451/1‑140 (MQ=255)

                                                                                                                      ttCTCTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGGTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGa          >  1:101781/1‑140 (MQ=255)

                                                                                                                       tctcTGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAg         >  1:1059167/1‑140 (MQ=255)

                                                                                                                        ctctGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGc        <  2:29005/140‑1 (MQ=255)

                                                                                                                        ctctGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGc        <  1:104436/140‑1 (MQ=255)

                                                                                                                          ctGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGa                        <  1:35238/122‑1 (MQ=255)

                                                                                                                          ctGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGa                        >  2:35238/1‑122 (MQ=255)

                                                                                                                          ctGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCt      <  2:283788/140‑1 (MQ=255)

                                                                                                                           tGCA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTg     >  1:247267/1‑140 (MQ=255)

                                                                                                                             cA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTGCCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGc   <  2:101781/140‑1 (MQ=255)

                                                                                                                             cA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGc   <  2:38492/140‑1 (MQ=255)

                                                                                                                             cA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGc   <  1:1269229/140‑1 (MQ=255)

                                                                                                                             cA‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGc   <  1:1030122/140‑1 (MQ=255)

                                                                                                                              a‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCg  <  1:40906/140‑1 (MQ=255)

                                                                                                                              a‑‑TGTGGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCg  <  2:1565728/140‑1 (MQ=255)

                                                                                                                                  gtgGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCt      >  1:192752/1‑134 (MQ=255)

                                                                                                                                  gtgGGCGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCt      <  2:192752/134‑1 (MQ=255)

TATCGCTGGCGGGGCAGTGCAATTAATTATTGTATGTTTATAACGGTGTCAGCCCGTATTTAGCCCTTGCACGATTGCAAGCCTCATTGACGACTCCGTTCTCACCAGACATGGCGAATTCTCTGCA‑‑TGTGGACGATCGATTTTTATATATCGTGCAGCAGGCATTTTTGCCCGGGGTTCCTGCAAGGGCAATACATCGGGGGTTTTTCTGATTGGTACCGCTCATGCATCGGTGAAAAGGGGATATTTGTTCAGTGAGCCTGGCG  >  NC_000913/303816‑304081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`