Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,595,581 A→G F91L (TTT→CTT)  lgoR ← putative DNA‑binding transcriptional regulator LgoR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,595,5810AG100.0% 368.9 / NA 101F91L (TTT→CTT) lgoRputative DNA‑binding transcriptional regulator LgoR
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (55/46);  total (55/46)

Only 100 of 104 total aligned reads displayed.

TAACGGCCGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAACACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACG  >  NC_000913/4595445‑4595716
                                                                                                                                        |                                                                                                                                       
taACGGCCGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAgcac                                                                                                                                      >  1:1117880/1‑140 (MQ=255)
taACGGCCGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAgcac                                                                                                                                      <  2:1329537/140‑1 (MQ=255)
taACGGCCGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAgcac                                                                                                                                      >  1:12767/1‑140 (MQ=255)
 aaCGGCCGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACt                                                                                                                                     <  2:713400/140‑1 (MQ=255)
      ccGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACtttgtt                                                                                                                                <  2:76491/140‑1 (MQ=255)
      ccGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACtttgtt                                                                                                                                >  2:422458/1‑140 (MQ=255)
      ccGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACtttgtt                                                                                                                                >  1:970128/1‑140 (MQ=255)
      ccGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACtttgtt                                                                                                                                <  2:591912/140‑1 (MQ=255)
      ccGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACtttgtt                                                                                                                                >  1:288242/1‑140 (MQ=255)
      ccGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACt                                                                                                                                     >  2:1165431/1‑135 (MQ=255)
      ccGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACt                                                                                                                                     <  1:1165431/135‑1 (MQ=255)
           ttttAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTttgttttgtt                                                                                                                           <  2:970128/140‑1 (MQ=255)
             ttAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCa                                                                                                                         <  1:422458/140‑1 (MQ=255)
             ttAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCa                                                                                                                         <  1:1324291/140‑1 (MQ=255)
              tAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCAc                                                                                                                        >  1:1547881/1‑140 (MQ=255)
                   gATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCAtt                                                                                                                   <  2:288242/140‑1 (MQ=255)
                     tatTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACtttgttt                                                                                                                               >  1:1577093/1‑126 (MQ=255)
                     tatTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACtttgttt                                                                                                                               <  2:1577093/126‑1 (MQ=255)
                     tatTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGa                                                                                                                 <  1:726140/140‑1 (MQ=255)
                             tactacAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGgtag                                                                                                         >  1:651836/1‑140 (MQ=255)
                              actacAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAg                                                                                                               >  2:1124024/1‑133 (MQ=255)
                              actacAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAg                                                                                                               >  2:1095558/1‑133 (MQ=255)
                              actacAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAg                                                                                                               <  1:1095558/133‑1 (MQ=255)
                              actacAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAg                                                                                                               <  1:1124024/133‑1 (MQ=255)
                                   aaCCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAgg                                                                                                   >  1:1130458/1‑140 (MQ=255)
                                    aCCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGc                                                                                                  >  1:1360452/1‑140 (MQ=255)
                                    aCCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGc                                                                                                  >  1:9745/1‑140 (MQ=255)
                                    aCCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGc                                                                                                  >  1:1255903/1‑140 (MQ=255)
                                      cGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTTGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGa                                                                                                <  2:1130458/140‑1 (MQ=255)
                                      cGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGa                                                                                                >  2:1350627/1‑140 (MQ=255)
                                        ggCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGaaa                                                                                              >  1:37932/1‑140 (MQ=255)
                                        ggCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGaaa                                                                                              >  2:1202487/1‑140 (MQ=255)
                                         gCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAg                                                                                                               >  1:987509/1‑122 (MQ=255)
                                         gCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAAc                                                                                             <  2:1040359/140‑1 (MQ=255)
                                           tGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCg                                                                                           <  2:1360452/140‑1 (MQ=255)
                                            gACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGt                                                                                          >  1:69018/1‑140 (MQ=255)
                                             acacCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGtc                                                                                         >  2:1473285/1‑140 (MQ=255)
                                                cccGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGtcatc                                                                                      <  2:1547881/140‑1 (MQ=255)
                                                  cgcgGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTcatcat                                                                                    >  2:847498/1‑140 (MQ=255)
                                                   gcgGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGtcat                                                                                       >  2:229463/1‑136 (MQ=255)
                                                   gcgGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGtcat                                                                                       <  1:229463/136‑1 (MQ=255)
                                                   gcgGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATg                                                                                   >  1:1431296/1‑140 (MQ=255)
                                                   gcgGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATg                                                                                   >  2:818598/1‑140 (MQ=255)
                                                    cgGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATgg                                                                                  >  1:717603/1‑140 (MQ=255)
                                                    cgGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATgg                                                                                  >  1:961099/1‑140 (MQ=255)
                                                     ggCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTCTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGt                                                                                 <  2:1117880/140‑1 (MQ=255)
                                                       cccGAGCCAGTTGCAGTTAAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAGGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCa                                                                               >  2:961723/1‑140 (MQ=255)
                                                          gAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGt                                                                            <  1:1350627/140‑1 (MQ=255)
                                                           aGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGtt                                                                           >  2:33160/1‑140 (MQ=255)
                                                             ccAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTa                                                                         <  1:617834/140‑1 (MQ=255)
                                                             ccAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTa                                                                         <  2:248720/140‑1 (MQ=255)
                                                               aGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTAcg                                                                       <  2:651836/140‑1 (MQ=255)
                                                               aGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTAcg                                                                       <  2:37932/140‑1 (MQ=255)
                                                               aGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTAcg                                                                       <  2:318249/140‑1 (MQ=255)
                                                                 ttGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTAcgcg                                                                     >  2:643696/1‑140 (MQ=255)
                                                                    cAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCaa                                                                  <  2:782868/140‑1 (MQ=255)
                                                                      gTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTa                                                                         >  2:308371/1‑131 (MQ=255)
                                                                      gTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTa                                                                         <  1:308371/131‑1 (MQ=255)
                                                                         cAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACa                                                             <  2:12767/140‑1 (MQ=255)
                                                                           gAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATa                                                           >  1:1119851/1‑140 (MQ=255)
                                                                             aaaCGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGt                                                         <  2:1255903/140‑1 (MQ=255)
                                                                                 gTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGtt                                                     >  1:360337/1‑140 (MQ=255)
                                                                                     ccccTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCa                                                 >  2:1535624/1‑140 (MQ=255)
                                                                                       ccTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAAc                                               <  1:818598/140‑1 (MQ=255)
                                                                                             cGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGt                                         >  2:1171847/1‑140 (MQ=255)
                                                                                                aaCTGGCGCTGGTTTATCATTGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCaa                                      >  1:131548/1‑140 (MQ=255)
                                                                                                aaCTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCaa                                      >  1:1480140/1‑140 (MQ=255)
                                                                                                aaCTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCaa                                      >  2:62806/1‑140 (MQ=255)
                                                                                                aaCTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCaa                                      >  1:845666/1‑140 (MQ=255)
                                                                                                    ggCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGAcg                                  <  2:80668/140‑1 (MQ=255)
                                                                                                     gcgcTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGAcgc                                 >  1:1111412/1‑140 (MQ=255)
                                                                                                     gcgcTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGAcgc                                 >  2:53882/1‑140 (MQ=255)
                                                                                                     gcgcTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGAcgc                                 >  1:1485660/1‑140 (MQ=255)
                                                                                                      cgcTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGAcgcc                                >  1:1433461/1‑140 (MQ=255)
                                                                                                       gcTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGAcgccg                               >  1:461188/1‑140 (MQ=255)
                                                                                                       gcTGGTTTATCATCGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGCTTCCAACCTGCGTCAAGAcgccg                               <  2:9745/140‑1 (MQ=255)
                                                                                                                  atcGTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTaa                    <  1:1473285/140‑1 (MQ=255)
                                                                                                                     gTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCGTTCGCGTAAGTg                 >  1:367707/1‑140 (MQ=255)
                                                                                                                     gTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCAtt                           >  1:297791/1‑130 (MQ=255)
                                                                                                                     gTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTg                 >  2:114776/1‑140 (MQ=255)
                                                                                                                     gTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTg                 >  2:897609/1‑140 (MQ=255)
                                                                                                                     gTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTg                 >  1:157997/1‑140 (MQ=255)
                                                                                                                     gTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTg                 >  2:113697/1‑140 (MQ=255)
                                                                                                                     gTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTg                 >  1:1219012/1‑140 (MQ=255)
                                                                                                                     gTGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTg                 >  1:1430890/1‑140 (MQ=255)
                                                                                                                      tGAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTgg                >  2:492961/1‑140 (MQ=255)
                                                                                                                       gAAAAAAGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGc               <  2:1219012/140‑1 (MQ=255)
                                                                                                                        aaaaaaGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCt              <  2:165495/140‑1 (MQ=255)
                                                                                                                            aaGCCTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTgaga          <  1:1202487/140‑1 (MQ=255)
                                                                                                                               ccTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAata       >  2:1549280/1‑140 (MQ=255)
                                                                                                                               ccTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAata       <  2:461188/140‑1 (MQ=255)
                                                                                                                               ccTGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAata       <  1:492961/140‑1 (MQ=255)
                                                                                                                                 tGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAatata     <  2:717603/140‑2 (MQ=255)
                                                                                                                                 tGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATg     <  2:1431296/140‑1 (MQ=255)
                                                                                                                                 tGCTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATg     <  2:961099/140‑1 (MQ=255)
                                                                                                                                   cTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGAc   >  2:1372137/1‑140 (MQ=255)
                                                                                                                                   cTCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGAc   >  1:629752/1‑140 (MQ=255)
                                                                                                                                    tCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACg  <  2:629752/140‑1 (MQ=255)
                                                                                                                                    tCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACg  <  1:1171847/140‑1 (MQ=255)
                                                                                                                                    tCAAGCACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACg  <  1:643696/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                       
TAACGGCCGAATTTTAAAAGATATTCTCTTACTACAACCGGGCTGACACCCGCGGCCCGAGCCAGTTGCAGTTCAGAAAACGTTTCCCCTGGGCGTAACTGGCGCTGGTTTATCATCGTGAAAAAAGCCTGCTCAAACACTTTGTTTTGTTCACTCATTGAAGCGGTAGTACAGGCGAAACCGTCATCATGGTCAGGTTTACGCGCAATAACATAGTCGTTTCCAACCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACG  >  NC_000913/4595445‑4595716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑