BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	968,542	C→T	N59N (AAC→AAT)	lpxK →	tetraacyldisaccharide 4'‑kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	968,542	0	C	T	100.0%	365.6 / NA	102	N59N (AAC→AAT)	lpxK	tetraacyldisaccharide 4'‑kinase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (55/47); total (55/47)

Only 100 of 103 total aligned reads displayed.

CTATTGCTGCCACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAACGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACCACAACAGCA  >  NC_000913/968408‑968677

cTATTGCTGCCACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGaaa                                                                                                                                    <  1:1015196/140‑1 (MQ=255)

cTATTGCTGCCACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGaaa                                                                                                                                    >  1:739120/1‑140 (MQ=255)

     gctgcCACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAAccc                                                                                                                               <  2:1039076/140‑1 (MQ=255)

         ccACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGt                                                                                                                           <  2:261882/140‑1 (MQ=255)

         ccACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGt                                                                                                                           >  2:1213147/1‑140 (MQ=255)

         ccACTCTCCTGGTTGTATGGCCTGGTGACTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGt                                                                                                                           <  1:375879/140‑1 (MQ=255)

          cACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTc                                                                                                                          >  1:1155836/1‑140 (MQ=255)

          cACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTc                                                                                                                          >  2:46864/1‑140 (MQ=255)

             tctcCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGtt                                                                                                                       >  1:281497/1‑140 (MQ=255)

                ccTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTc                                                                                                                    >  2:930960/1‑140 (MQ=255)

                    gTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTctggc                                                                                                                <  2:1343193/140‑1 (MQ=255)

                       gTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTctggctgg                                                                                                             >  2:323710/1‑140 (MQ=255)

                       gTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTctggctgg                                                                                                             >  1:1624822/1‑140 (MQ=255)

                        tATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCtggt                                                                                                            >  1:1370744/1‑140 (MQ=255)

                         aTGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCtggtg                                                                                                           >  2:1001328/1‑140 (MQ=255)

                         aTGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCtggtg                                                                                                           >  1:763314/1‑140 (MQ=255)

                         aTGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCtggtg                                                                                                           >  1:35835/1‑140 (MQ=255)

                         aTGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTATGGCtggtg                                                                                                           >  2:912513/1‑140 (MQ=255)

                           ggCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGa                                                                                                         >  1:62156/1‑140 (MQ=255)

                           ggCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGa                                                                                                         <  2:1624822/140‑1 (MQ=255)

                           ggCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGa                                                                                                         <  2:430643/140‑1 (MQ=255)

                               tGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCTGGTCGTTGTCTGGCTGGTGGAACAg                                                                                                     >  2:1308432/1‑140 (MQ=255)

                                 gTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGtt                                                                                                   >  2:697855/1‑140 (MQ=255)

                                  tGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTg                                                                                                  >  1:1528592/1‑140 (MQ=255)

                                  tGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTg                                                                                                  >  1:141199/1‑140 (MQ=255)

                                      tGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAAc                                                                                              >  2:880111/1‑140 (MQ=255)

                                      tGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAAc                                                                                              >  1:1171565/1‑140 (MQ=255)

                                      tGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAAc                                                                                              >  1:291220/1‑140 (MQ=255)

                                          gcgATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAgcg                                                                                          <  2:141199/140‑1 (MQ=255)

                                           cgATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAgcgc                                                                                         >  2:23197/1‑140 (MQ=255)

                                           cgATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAgcgc                                                                                         >  1:1203022/1‑140 (MQ=255)

                                           cgATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAgcgc                                                                                         >  2:864873/1‑140 (MQ=255)

                                            gATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGcgcg                                                                                        <  2:1528592/140‑1 (MQ=255)

                                             aTCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCgg                                                                                       >  2:550392/1‑140 (MQ=255)

                                             aTCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCgg                                                                                       <  1:608849/140‑1 (MQ=255)

                                              tCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGt                                                                                      >  1:795094/1‑140 (MQ=255)

                                              tCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGt                                                                                      >  1:1067733/1‑140 (MQ=255)

                                                      tGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGt                                                                              <  1:405340/140‑1 (MQ=255)

                                                       gCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTg                                                                             >  2:831946/1‑140 (MQ=255)

                                                        cTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAGCAGCGCGGTATTCGCGTgg                                                                            >  1:1045288/1‑140 (MQ=255)

                                                        cTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTgg                                                                            >  2:1339113/1‑140 (MQ=255)

                                                           taAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTggg                                                                           >  2:1459382/1‑138 (MQ=255)

                                                           taAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTggg                                                                           <  1:1459382/138‑1 (MQ=255)

                                                             aaCTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTc                                                                       >  2:534103/1‑140 (MQ=255)

                                                               cTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGt                                                                     <  1:46864/140‑1 (MQ=255)

                                                                  aaaCTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATc                                                                  >  2:296012/1‑140 (MQ=255)

                                                                  aaaCTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATc                                                                  >  1:1499839/1‑140 (MQ=255)

                                                                   aaCTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATcg                                                                 <  1:1213147/140‑1 (MQ=255)

                                                                   aaCTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATcg                                                                 <  1:697855/140‑1 (MQ=255)

                                                                   aaCTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATcg                                                                 <  2:1203022/140‑1 (MQ=255)

                                                                   aaCTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATcg                                                                 <  2:281497/140‑1 (MQ=255)

                                                                   aaCCGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATcg                                                                 <  2:1145457/140‑1 (MQ=255)

                                                                    aCTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATcgc                                                                <  2:1171565/140‑1 (MQ=255)

                                                                    aCTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATcgc                                                                <  2:240551/140‑1 (MQ=255)

                                                                     cTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCTGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATcgcg                                                               <  1:1308432/140‑1 (MQ=255)

                                                                      tGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCgg                                                              <  1:1433036/140‑1 (MQ=255)

                                                                        aaGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTg                                                                             >  2:178319/1‑123 (MQ=255)

                                                                        aaGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTg                                                                             <  1:178319/123‑1 (MQ=255)

                                                                        aaGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCgggg                                                            <  1:1354301/140‑1 (MQ=255)

                                                                        aaGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCgggg                                                            <  2:51155/140‑1 (MQ=255)

                                                                        aaGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCgggg                                                            >  2:129667/1‑140 (MQ=255)

                                                                        aaGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCgg                                                              <  1:630056/138‑1 (MQ=255)

                                                                        aaGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCgg                                                              >  2:630056/1‑138 (MQ=255)

                                                                         aGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGt                                                                     <  1:1296734/130‑1 (MQ=255)

                                                                         aGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGt                                                                     >  2:1296734/1‑130 (MQ=255)

                                                                          gcgcgcCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGat                                                          >  2:1056996/1‑140 (MQ=255)

                                                                          gcgcgcCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGat                                                          <  1:296012/140‑1 (MQ=255)

                                                                          gcgcgcCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGat                                                          <  1:930960/140‑1 (MQ=255)

                                                                            gcgcCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGatat                                                        <  1:129667/140‑1 (MQ=255)

                                                                            gcgcCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGatat                                                        <  1:880111/140‑1 (MQ=255)

                                                                             cgcCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTATGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATAtg                                                       <  1:912513/140‑1 (MQ=255)

                                                                               ccTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATAtggt                                                     <  1:911380/140‑1 (MQ=255)

                                                                                   gCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTa                                                 <  1:1590014/140‑1 (MQ=255)

                                                                                      tGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAgg                                              <  2:739120/140‑1 (MQ=255)

                                                                                        cccccGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCt                                            >  1:1363215/1‑140 (MQ=255)

                                                                                                  ggTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATc                                  <  2:255022/140‑1 (MQ=255)

                                                                                                  ggTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATc                                  >  1:1090606/1‑140 (MQ=255)

                                                                                                  ggTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATc                                  >  1:1500776/1‑140 (MQ=255)

                                                                                                  ggTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATc                                  <  2:62156/140‑1 (MQ=255)

                                                                                                   gTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATcc                                 >  1:1148743/1‑140 (MQ=255)

                                                                                                   gTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATcc                                 >  2:305521/1‑140 (MQ=255)

                                                                                                   gTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATcc                                 >  2:852513/1‑140 (MQ=255)

                                                                                                   gTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATcc                                 >  1:700931/1‑140 (MQ=255)

                                                                                                         gTGGTTGGTAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGtt                           >  1:783376/1‑140 (MQ=255)

                                                                                                          tggttggtAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTa                          <  2:291220/140‑1 (MQ=255)

                                                                                                             ttggtAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTg                       <  1:305521/140‑1 (MQ=255)

                                                                                                              tggtAATCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGt                      >  1:282051/1‑140 (MQ=255)

                                                                                                                   aTCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCa                 <  2:1148743/140‑1 (MQ=255)

                                                                                                                   aTCTCACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCa                 <  2:35835/140‑1 (MQ=255)

                                                                                                                     ctcACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGa               <  1:1056996/140‑1 (MQ=255)

                                                                                                                     ctcACCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGa               >  1:48275/1‑140 (MQ=255)

                                                                                                                        aCCGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATAc            <  1:1339113/140‑1 (MQ=255)

                                                                                                                          cGCAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACca          >  2:1417824/1‑140 (MQ=255)

                                                                                                                            cAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACcaca        >  2:65657/1‑140 (MQ=255)

                                                                                                                            cAGGCGGCAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACcaca        >  2:820223/1‑140 (MQ=255)

                                                                                                                              ggcggcAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTg                       <  2:302002/123‑1 (MQ=255)

                                                                                                                              ggcggcAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACCacaac      >  1:294287/1‑140 (MQ=255)

                                                                                                                              ggcggcAATGGAAAAACCCCGGCCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTg                       >  1:302002/1‑123 (MQ=255)

                                                                                                                               gcggcAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACCacaaca     >  2:1526746/1‑140 (MQ=255)

                                                                                                                                  gcAATGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACCACAACAGca  >  1:1444840/1‑140 (MQ=255)

CTATTGCTGCCACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAACGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACCACAACAGCA  >  NC_000913/968408‑968677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`