Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,115,363	T→C	Q43R (CAG→CGG)	mdtG ←	efflux pump MdtG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,115,363	0	T	C	100.0%	282.0 / NA	79	Q43R (CAG→CGG)	mdtG	efflux pump MdtG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/44);  total (35/44)

TAATAGCATGAGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCTGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAGGGTGACATAGCAATCCG  >  NC_000913/1115227‑1115499                                                                                                                                         |                                                                                                                                         tAATAGCATGAGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAgccgct                                                                                                                                       <  2:1566236/140‑1 (MQ=255) tAATAGCATGAGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAgccgct                                                                                                                                       <  1:397496/140‑1 (MQ=255)  aaTAGCATGAGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTc                                                                                                                                      >  1:414241/1‑140 (MQ=255)   aTAGCATGAGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCa                                                                                                                                     <  2:308157/140‑1 (MQ=255)    tAGCATGAGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACG‑CAAGCCGCTCAAc                                                                                                                                   <  2:407965/140‑1 (MQ=255)        aTGAGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTa                                                                                                                                <  1:180442/140‑1 (MQ=255)          gAGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTaga                                                                                                                              <  1:1099190/140‑1 (MQ=255)           aGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAgccgc                                                                                                                                        >  2:1285512/1‑129 (MQ=255)                  ggCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTaag                                                                                                                      <  2:1199721/140‑1 (MQ=255)                   gCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTaaga                                                                                                                     <  1:1586153/140‑1 (MQ=255)                   gCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTaaga                                                                                                                     <  2:334397/140‑1 (MQ=255)                   gCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTaaga                                                                                                                     <  2:763201/140‑1 (MQ=255)                       ttACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAggg                                                                                                                 <  1:330076/140‑1 (MQ=255)                        tACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGc                                                                                                                <  1:849927/140‑1 (MQ=255)                              cGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTAcc                                                                                                          >  1:1240010/1‑140 (MQ=255)                                      ccACCCCAAAACGGTGAGGCAATGGCCTAAAATAAAAATGTAATGCTCAAGACAATACCGGACCCCATATTCAGGGGGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGCTAAGAAGGGCATTACCAGACTGaa                                                                                                  <  2:960677/140‑1 (MQ=255)                                       cACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAg                                                                                                 >  1:1157543/1‑140 (MQ=255)                                               aaCGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCAcc                                                                                         >  2:315478/1‑140 (MQ=255)                                               aaCGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCAcc                                                                                         <  2:130400/140‑1 (MQ=255)                                               aaCGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCAcc                                                                                         <  2:393114/140‑1 (MQ=255)                                               aaCGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCAcc                                                                                         <  1:235360/140‑1 (MQ=255)                                               aaCGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCAcc                                                                                         <  1:966910/140‑1 (MQ=255)                                                    tGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAA‑GGCATTACCAGACTGAAGGCGGCa                                                                                           >  1:1420912/1‑132 (MQ=255)                                                    tGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAA‑GGCATTACCAGACTGAAGGCGGCa                                                                                           <  2:1420912/132‑1 (MQ=255)                                                        gCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCa                                                                                           <  2:1252321/129‑1 (MQ=255)                                                        gCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCa                                                                                           >  1:1252321/1‑129 (MQ=255)                                                        gCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGaaa                                                                                <  1:354903/140‑1 (MQ=255)                                                         cGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGaaaa                                                                               <  2:393194/140‑1 (MQ=255)                                                              gCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGcc                                                                          <  2:664263/140‑1 (MQ=255)                                                                  aaaaTAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGa                                                                                  >  1:1614006/1‑128 (MQ=255)                                                                  aaaaTAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGa                                                                                  <  2:1614006/128‑1 (MQ=255)                                                                      tAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAgg                                                                  <  2:414241/140‑1 (MQ=255)                                                                                      aaGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGgtttcg                                                  >  1:1211519/1‑140 (MQ=255)                                                                                          cAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGgtttcgtttc                                              <  1:1585400/140‑1 (MQ=255)                                                                                           aaTACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTcc                                             >  2:1409823/1‑140 (MQ=255)                                                                                             tACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGgtttcgtttc                                              >  1:907825/1‑137 (MQ=255)                                                                                             tACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGgtttcgtttc                                              <  2:907825/137‑1 (MQ=255)                                                                                                cGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGgtttcgttt                                               >  2:252928/1‑133 (MQ=255)                                                                                                cGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGgtttcgttt                                               <  1:252928/133‑1 (MQ=255)                                                                                                cGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGttt                                        >  1:716189/1‑140 (MQ=255)                                                                                                cGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGttt                                        >  2:1303877/1‑140 (MQ=255)                                                                                                  gACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGACATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTtat                                      >  2:1110292/1‑140 (MQ=255)                                                                                                       caTATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGgtttcgtttc                                              >  1:1517961/1‑127 (MQ=255)                                                                                                       caTATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGgtttcgtttc                                              <  2:1517961/127‑1 (MQ=255)                                                                                                       caTATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAgggg                                 >  2:234782/1‑140 (MQ=255)                                                                                                       caTATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAgggg                                 >  2:1409884/1‑140 (MQ=255)                                                                                                       caTATTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAgggg                                 >  1:330965/1‑140 (MQ=255)                                                                                                        atatTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGNNGACGATCAGGTTTCGTTTCCAGTTTATAGGGgt                                <  1:315478/140‑1 (MQ=255)                                                                                                        atatTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGgt                                <  2:1360115/140‑1 (MQ=255)                                                                                                        atatTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGgt                                <  1:1254828/140‑1 (MQ=255)                                                                                                         tatTCAGGGCGGAGTGACCGGTAACGCCGAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGgtg                               >  2:290667/1‑140 (MQ=255)                                                                                                          atTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCa                                            >  1:1059220/1‑126 (MQ=255)                                                                                                          atTCAGGGCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCa                                            <  2:1059220/126‑1 (MQ=255)                                                                                                               gggCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCAttt                         >  2:765857/1‑140 (MQ=255)                                                                                                               gggCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCAttt                         >  1:994717/1‑140 (MQ=255)                                                                                                                ggCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCAtttt                        <  2:687877/140‑1 (MQ=255)                                                                                                                 gCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTc                       >  2:877472/1‑140 (MQ=255)                                                                                                                 gCGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTc                       >  2:1278710/1‑140 (MQ=255)                                                                                                                  cGGAGTGACCGGTAACGCCGAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTca                      <  1:290667/140‑1 (MQ=255)                                                                                                                  cGGAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTca                      >  2:869773/1‑140 (MQ=255)                                                                                                                    gAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGTGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTcaca                    <  2:218615/140‑1 (MQ=255)                                                                                                                    gAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTcaca                    <  1:765857/140‑1 (MQ=255)                                                                                                                    gAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTca                      >  1:745664/1‑138 (MQ=255)                                                                                                                    gAGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTca                      <  2:745664/138‑1 (MQ=255)                                                                                                                     aGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTca                      <  1:982365/137‑1 (MQ=255)                                                                                                                     aGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTca                      >  2:982365/1‑137 (MQ=255)                                                                                                                     aGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAg                   >  2:183953/1‑140 (MQ=255)                                                                                                                     aGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAg                   >  1:1168165/1‑140 (MQ=255)                                                                                                                     aGTGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAg                   >  1:747984/1‑140 (MQ=255)                                                                                                                     aGTGACCAGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAg                   >  2:254314/1‑140 (MQ=255)                                                                                                                       tGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAggg                 <  2:994717/140‑1 (MQ=255)                                                                                                                       tGACCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAggg                 <  2:1531758/140‑1 (MQ=255)                                                                                                                         aCCGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAGGGTg               <  2:529016/140‑1 (MQ=255)                                                                                                                          ccGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAgg                  >  1:751646/1‑136 (MQ=255)                                                                                                                          ccGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAgg                  <  2:751646/136‑1 (MQ=255)                                                                                                                          ccGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAgg                  >  1:971283/1‑136 (MQ=255)                                                                                                                          ccGGTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAgg                  <  2:971283/136‑1 (MQ=255)                                                                                                                            ggTAACGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAGGGTGACa            <  1:183953/140‑1 (MQ=255)                                                                                                                               aaCGCCAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAGGGTGACATAg         <  1:1409884/140‑1 (MQ=255)                                                                                                                                   ccAAGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAGGGTGACATAGCAAt     >  1:1382549/1‑140 (MQ=255)                                                                                                                                     aaGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAGGGTGACATAGCAATcc   >  2:243830/1‑140 (MQ=255)                                                                                                                                      aGCCGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAGGGTGACATAGcggattg  <  1:231505/140‑7 (MQ=255)                                                                                                                                         |                                                                                                                                         TAATAGCATGAGTTTTCGGCCTTTACGGTCGGCGAGTCCACCCCAAAACGGTGAGGCGATGGCCGAAAATAAAAATGTAATGCTGAAGACAATACCGGACCACATATTCAGGGCGGAGTGACCGGTAACGCCAAGCTGCTCAACGTAGAGGGGTAAGAAGGGCATTACCAGACTGAAGGCGGCACCGGTAAGAAAACAGCCTAGCCAGGCGACGATCAGGTTTCGTTTCCAGTTTATAGGGGTGTCATTTTCACAGGGTGACATAGCAATCCG  >  NC_000913/1115227‑1115499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑