Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	156,242	T→C	intergenic (‑41/+57)	yadV ← / ← yadN	putative fimbrial chaperone YadV/putative fimbrial protein YadN

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	156,242	0	T	C	100.0%	338.1 / NA	92	intergenic (‑41/+57)	yadV/yadN	putative fimbrial chaperone YadV/putative fimbrial protein YadN
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (34/58);  total (34/58)

TACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATATAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCACGAACG  >  NC_000913/156108‑156377                                                                                                                                       |                                                                                                                                        tACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAAt                                                                                                                                    >  2:910985/1‑140 (MQ=255)  aCCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATa                                                                                                                                   <  1:554784/140‑1 (MQ=255)    ccGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGa                                                                                                                                 <  1:830142/140‑1 (MQ=255)    ccGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGa                                                                                                                                 <  1:218910/140‑1 (MQ=255)         aTGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAatta                                                                                                                            <  1:961793/140‑1 (MQ=255)          tGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattat                                                                                                                           >  1:1079559/1‑140 (MQ=255)           gACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattatt                                                                                                                          <  2:435792/140‑1 (MQ=255)             cAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattattat                                                                                                                        <  1:1061012/140‑1 (MQ=255)             cAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattattat                                                                                                                        <  2:1472170/140‑1 (MQ=255)             cAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattattat                                                                                                                        <  2:180243/140‑1 (MQ=255)             cAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattattat                                                                                                                        <  1:1607206/140‑1 (MQ=255)              aaTGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattattatt                                                                                                                       >  1:406858/1‑140 (MQ=255)              aaTGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattattatt                                                                                                                       <  1:335894/140‑1 (MQ=255)              aaTGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattattatt                                                                                                                       <  1:553904/140‑1 (MQ=255)               aTGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTc                                                                                                                      <  1:1528439/140‑1 (MQ=255)               aTGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTc                                                                                                                      <  1:7375/140‑1 (MQ=255)                tGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTcc                                                                                                                     <  2:1479400/140‑1 (MQ=255)                 gTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTccc                                                                                                                    <  2:244392/140‑1 (MQ=255)                 gTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTccc                                                                                                                    <  2:99130/140‑1 (MQ=255)                 gTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTccc                                                                                                                    <  2:1223705/140‑1 (MQ=255)                 gTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTccc                                                                                                                    <  1:126533/140‑1 (MQ=255)                 gTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTccc                                                                                                                    <  2:448189/140‑1 (MQ=255)                  tCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattattatt                                                                                                                       <  1:1140857/136‑1 (MQ=255)                  tCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAattattatt                                                                                                                       >  2:1140857/1‑136 (MQ=255)                     gCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGta                                                                                                                >  2:336448/1‑140 (MQ=255)                       aaTAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGtata                                                                                                              <  1:311764/140‑1 (MQ=255)                          aGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATattc                                                                                                           >  2:235663/1‑140 (MQ=255)                          aGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATattc                                                                                                           >  2:409917/1‑140 (MQ=255)                            aCGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATattcat                                                                                                         >  2:281346/1‑140 (MQ=255)                              gATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTccc                                                                                                                    <  1:1244278/127‑1 (MQ=255)                              gATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTccc                                                                                                                    >  2:1244278/1‑127 (MQ=255)                              gATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATattcattc                                                                                                       >  2:586846/1‑140 (MQ=255)                              gATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATattcattc                                                                                                       >  1:3376/1‑140 (MQ=255)                              gATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATattcattc                                                                                                       >  2:1481412/1‑140 (MQ=255)                               aTGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATAttcattca                                                                                                      <  2:3376/140‑1 (MQ=255)                               aTGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATAttcattca                                                                                                      <  2:823029/140‑1 (MQ=255)                               aTGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATAttcattca                                                                                                      <  2:99575/140‑1 (MQ=255)                                tGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATtcaa                                                                                                     <  1:336448/140‑1 (MQ=255)                                   aCTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATtcaatca                                                                                                  >  2:134585/1‑140 (MQ=255)                                   aCTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATtcaatca                                                                                                  >  2:368692/1‑140 (MQ=255)                                      aaaaGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAAtt                                                                                               >  1:1062996/1‑140 (MQ=255)                                         aGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTaa                                                                                            <  1:1081491/140‑1 (MQ=255)                                         aGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTaa                                                                                            <  1:281346/140‑1 (MQ=255)                                         aGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTaa                                                                                            <  2:984408/140‑1 (MQ=255)                                         aGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTaa                                                                                            <  1:235663/140‑1 (MQ=255)                                         aGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTaa                                                                                            <  1:368692/140‑1 (MQ=255)                                         aGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTaa                                                                                            <  1:134585/140‑1 (MQ=255)                                         aGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTaa                                                                                            <  1:409917/140‑1 (MQ=255)                                               aCAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTg                                                                                      >  2:1300199/1‑140 (MQ=255)                                                cAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGa                                                                                     <  1:1563682/140‑1 (MQ=255)                                                  ggTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAAt                                                                                   <  1:1481412/140‑1 (MQ=255)                                                   gTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAAta                                                                                  >  2:3651/1‑140 (MQ=255)                                                     tACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAAtact                                                                                <  1:252273/140‑1 (MQ=255)                                                     tACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAAtact                                                                                <  2:1482325/140‑1 (MQ=255)                                                     tACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAAtact                                                                                <  2:1062996/140‑1 (MQ=255)                                                      aCGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGGAATTATTATTCCCTGTATATTCATTCAATCAATTTaa                                                                                            >  1:855281/1‑127 (MQ=255)                                                      aCGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTaa                                                                                            <  2:855281/127‑1 (MQ=255)                                                       cGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAAtactta                                                                              <  2:180677/140‑1 (MQ=255)                                                        gAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAAtacttac                                                                             <  1:910985/140‑1 (MQ=255)                                                          aGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTg                                                                           <  2:1322661/140‑1 (MQ=255)                                                            cATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGAt                                                                         <  2:28621/140‑1 (MQ=255)                                                                 aGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTa                                                                    <  1:203719/140‑1 (MQ=255)                                                                 aGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTa                                                                    <  1:843882/140‑1 (MQ=255)                                                                   cTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAAt                                                                  <  1:1300199/140‑1 (MQ=255)                                                                     gttgtATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATgg                                                                <  2:680253/140‑1 (MQ=255)                                                                      ttgtATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGgt                                                               >  2:927726/1‑140 (MQ=255)                                                                         tATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTa                                                            <  2:1281209/140‑1 (MQ=255)                                                                           tGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATg                                                          >  1:252446/1‑140 (MQ=255)                                                                                ggTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTa                                                            <  2:1412496/133‑1 (MQ=255)                                                                                ggTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTa                                                            >  1:1412496/1‑133 (MQ=255)                                                                                ggTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAgtg                                                     >  1:270482/1‑140 (MQ=255)                                                                                ggTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAgtg                                                     >  2:172338/1‑140 (MQ=255)                                                                                ggTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAgtg                                                     >  1:307290/1‑140 (MQ=255)                                                                                   gtTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTa                                                  >  2:1350880/1‑140 (MQ=255)                                                                                      aaaaaaCATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGtt                                               >  1:1159476/1‑140 (MQ=255)                                                                                        aaaaCATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGGAGTGTTAGtttt                                             <  1:893371/140‑1 (MQ=255)                                                                                            cATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAA‑TTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACAt                                        >  2:382936/1‑140 (MQ=255)                                                                                                   cATCCCTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACcag                                  <  2:262711/140‑1 (MQ=255)                                                                                                       ccTGATAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGt                              <  2:813734/140‑1 (MQ=255)                                                                                                           aTAGAGTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCt                          >  1:1338408/1‑140 (MQ=255)                                                                                                              gagTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGtt                       <  2:406858/140‑1 (MQ=255)                                                                                                               agTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGttt                      >  2:1243188/1‑140 (MQ=255)                                                                                                               agTTAATTAAAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGttt                      >  1:517188/1‑140 (MQ=255)                                                                                                                     ttaaAACAGGGAATAATACAAAATAGAAATTATTATTCCCTGTACATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTg                >  2:44692/1‑140 (MQ=255)                                                                                                                             gggAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCa        <  1:97507/140‑1 (MQ=255)                                                                                                                             gggAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCa        <  2:270482/140‑1 (MQ=255)                                                                                                                             gggAATAATACAAAATAGAAATTATTATTCCCTGTACATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCa        <  1:44692/140‑1 (MQ=255)                                                                                                                              ggAATAATACAAAATAGACATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCAc       >  1:959666/1‑140 (MQ=255)                                                                                                                              ggAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCAc       >  2:801444/1‑140 (MQ=255)                                                                                                                              ggAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCAc       <  1:663300/140‑1 (MQ=255)                                                                                                                              ggAATAATACAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCAc       >  1:407514/1‑140 (MQ=255)                                                                                                                                   aataCAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCACGAACg  <  1:1380316/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                        TACCCGAAATGACAATGTCCGCAATAGACGATGAACTAAAAGCCATACAGGTTACGAAGCATAAAGCTGTTGTATGTTTGGTGTTAAAAAACATAAACCATCCCTGATAGAGTTAATTAAAACAGGGAATAATATAAAATAGAAATTATTATTCCCTGTATATTCATTCAATCAATTTAACTGGTGAATACTTACTGATAAGTAATGGTGTATGCAGTGTTAGTTTTTACATAACCAGCAGTTGCTGTTTGGTCTGCGACGGCACGAACG  >  NC_000913/156108‑156377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑