BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,463,534	T→C	Y175H (TAC→CAC)	yfdF →	protein YfdF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,463,534	0	T	C	100.0%	452.4 / NA	125	Y175H (TAC→CAC)	yfdF	protein YfdF
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (55/70); total (55/70)

Only 100 of 125 total aligned reads displayed.

TGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGTACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTC  >  NC_000913/2463397‑2463669

tGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCAc                                                                                                                                       >  2:269158/1‑140 (MQ=255)

 gATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACg                                                                                                                                      <  2:1345337/140‑1 (MQ=255)

   tCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGt                                                                                                                                    <  1:21935/140‑1 (MQ=255)

       cAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAg                                                                                                                                >  1:1026039/1‑140 (MQ=255)

       cAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAg                                                                                                                                >  2:355166/1‑140 (MQ=255)

             aTTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATaaaa                                                                                                                          >  1:551791/1‑140 (MQ=255)

                   aGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGACGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCg                                                                                                                    <  2:1451136/140‑1 (MQ=255)

                    gAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGa                                                                                                                   <  2:533043/140‑1 (MQ=255)

                    gAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGa                                                                                                                   >  2:1517880/1‑140 (MQ=255)

                        tatatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAGCGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGActct                                                                                                               <  2:973664/140‑1 (MQ=255)

                        tatatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGActct                                                                                                               <  2:1209358/140‑1 (MQ=255)

                        tatatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGActct                                                                                                               <  1:1354342/140‑1 (MQ=255)

                            tgatgaAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCg                                                                                                           <  2:551791/140‑1 (MQ=255)

                            tgatgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCg                                                                                                           <  1:1529282/140‑1 (MQ=255)

                            tgatgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCg                                                                                                           <  2:689027/140‑1 (MQ=255)

                               tgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGa                                                                                                                   <  2:229473/129‑1 (MQ=255)

                               tgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGa                                                                                                                   >  1:229473/1‑129 (MQ=255)

                               tgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTa                                                                                                        <  2:1028785/140‑1 (MQ=255)

                               tgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTa                                                                                                        >  2:887381/1‑140 (MQ=255)

                                  agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCGGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTg                                                                                                     >  1:303498/1‑140 (MQ=255)

                                  agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGActctct                                                                                                             >  2:1419009/1‑132 (MQ=255)

                                  agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTg                                                                                                     >  2:546211/1‑140 (MQ=255)

                                  agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTg                                                                                                     >  1:106392/1‑140 (MQ=255)

                                  agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTg                                                                                                     >  2:869585/1‑140 (MQ=255)

                                  agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTg                                                                                                     >  1:1578970/1‑140 (MQ=255)

                                        tGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATta                                                                                               >  1:1395819/1‑140 (MQ=255)

                                           ttttATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATtaaaa                                                                                            >  2:288572/1‑140 (MQ=255)

                                               aTCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATtaaaaataa                                                                                        >  1:1097484/1‑140 (MQ=255)

                                                tCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATtaaaaataaa                                                                                       >  2:571940/1‑140 (MQ=255)

                                                       tAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGaa                                                                                <  2:1521587/140‑1 (MQ=255)

                                                       tAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGaa                                                                                <  2:1155438/140‑1 (MQ=255)

                                                        aaGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGaaa                                                                               <  2:1290891/140‑1 (MQ=255)

                                                         aGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAAt                                                                              <  2:1395819/140‑1 (MQ=255)

                                                         aGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAAt                                                                              <  2:1582196/140‑1 (MQ=255)

                                                          gATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATg                                                                             >  2:1131012/1‑140 (MQ=255)

                                                           atatCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGa                                                                            <  2:1097484/140‑1 (MQ=255)

                                                               cacacaAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTAc                                                                        >  2:339764/1‑140 (MQ=255)

                                                                acacaAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACt                                                                       <  2:1578970/140‑1 (MQ=255)

                                                                    aaaCTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTAtc                                                                   >  1:96271/1‑140 (MQ=255)

                                                                    aaaCTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTAtc                                                                   >  2:846122/1‑140 (MQ=255)

                                                                     aaCTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGAt                                                                           <  1:403527/131‑1 (MQ=255)

                                                                     aaCTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGAt                                                                           >  2:403527/1‑131 (MQ=255)

                                                                     aaCTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTAtct                                                                  <  2:96271/140‑1 (MQ=255)

                                                                      aCTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTAtctc                                                                 >  1:1444682/1‑140 (MQ=255)

                                                                      aCTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTAtctc                                                                 >  1:1477157/1‑140 (MQ=255)

                                                                      aCTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTAtctc                                                                 >  2:644528/1‑140 (MQ=255)

                                                                        tCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTAtctctc                                                               <  1:6814/140‑1 (MQ=255)

                                                                        tCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTAtctctc                                                               <  1:1516286/140‑1 (MQ=255)

                                                                        tCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACAGAAATGATTACTTAtctctc                                                               <  2:68671/140‑1 (MQ=255)

                                                                         cAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGaa                                                                                >  2:813542/1‑122 (MQ=255)

                                                                          aGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCgg                                                             <  1:869585/140‑1 (MQ=255)

                                                                          aGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCgg                                                             <  1:375166/140‑1 (MQ=255)

                                                                              aTACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTtac                                                         <  2:477249/140‑1 (MQ=255)

                                                                                aCGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTtacta                                                       >  2:158155/1‑140 (MQ=255)

                                                                                aCGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTtacta                                                       >  2:1091276/1‑140 (MQ=255)

                                                                                  ggTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTAtct                                                                  >  1:75410/1‑127 (MQ=255)

                                                                                  ggTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACg                                                     >  1:1055955/1‑140 (MQ=255)

                                                                                  ggTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACg                                                     >  1:823183/1‑140 (MQ=255)

                                                                                  ggTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACg                                                     >  1:925420/1‑140 (MQ=255)

                                                                                    tAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGAt                                                   <  1:644528/140‑1 (MQ=255)

                                                                                    tAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGAt                                                   >  1:424753/1‑140 (MQ=255)

                                                                                    tAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGAt                                                   >  1:1597550/1‑140 (MQ=255)

                                                                                      aCGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCgg                                                             >  1:138169/1‑128 (MQ=255)

                                                                                      aCGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCgg                                                             <  2:138169/128‑1 (MQ=255)

                                                                                      aCGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCa                                                 >  1:1031015/1‑140 (MQ=255)

                                                                                       cGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAg                                                >  1:16977/1‑140 (MQ=255)

                                                                                        ggAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAgg                                               <  1:662554/140‑1 (MQ=255)

                                                                                        ggAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAgg                                               <  2:16977/140‑1 (MQ=255)

                                                                                        ggAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAgg                                               <  2:1055955/140‑1 (MQ=255)

                                                                                        ggAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAgg                                               <  2:106392/140‑1 (MQ=255)

                                                                                         gAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGga                                              <  1:1091276/140‑1 (MQ=255)

                                                                                            tttGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTtact                                                        >  2:40655/1‑127 (MQ=255)

                                                                                            tttGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTtact                                                        <  1:40655/127‑1 (MQ=255)

                                                                                            tttGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGgacga                                           <  1:1009379/140‑1 (MQ=255)

                                                                                             ttGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGgacgac                                          <  1:320558/140‑1 (MQ=255)

                                                                                                atgaGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTAc                                       <  2:1529537/140‑1 (MQ=255)

                                                                                                atgaGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTAc                                       >  1:486789/1‑140 (MQ=255)

                                                                                                     agCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAgg                                               <  1:1576468/127‑1 (MQ=255)

                                                                                                     agCGGGAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAgg                                               >  2:1576468/1‑127 (MQ=255)

                                                                                                        gggAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCa                               <  2:1026039/140‑1 (MQ=255)

                                                                                                          gAAAAGCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTC‑CGGTTACTACGATCAGGACGACTACCACATTCAAag                            <  1:571940/140‑1 (MQ=255)

                                                                                                               gCGAACCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGa                        >  2:936743/1‑140 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTAc                                       >  2:320067/1‑122 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTAc                                       <  1:320067/122‑1 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAag                            >  1:1418319/1‑133 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAag                            >  1:974471/1‑133 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAag                            >  1:845433/1‑133 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAag                            <  2:1418319/133‑1 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAag                            <  2:845433/133‑1 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAAtt                     <  1:887381/140‑1 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAAtt                     <  1:1445979/140‑1 (MQ=255)

                                                                                                                  aaCCAACGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAAtt                     <  1:1548074/140‑1 (MQ=255)

                                                                                                                      aaCGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTa                 <  2:46710/140‑1 (MQ=255)

                                                                                                                      aaCGGACTTATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTa                 <  2:1325404/140‑1 (MQ=255)

                                                                                                                              tATTTACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGt         <  1:271700/140‑1 (MQ=255)

                                                                                                                                tttACCTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGa       <  2:732385/140‑1 (MQ=255)

                                                                                                                                    ccTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGt   <  1:107337/140‑1 (MQ=255)

                                                                                                                                    ccTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGt   <  1:546211/140‑1 (MQ=255)

                                                                                                                                    ccTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGt   <  1:846122/140‑1 (MQ=255)

                                                                                                                                     cTGGCACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGtc  <  2:424753/140‑1 (MQ=255)

TGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGTACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTC  >  NC_000913/2463397‑2463669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`