Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,662,801 T→C T175A (ACG→GCG)  trmJ ← tRNA Cm32/Um32 methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,662,8010TC98.7% 263.8 / ‑4.5 77T175A (ACG→GCG) trmJtRNA Cm32/Um32 methyltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (33/43);  total (33/44)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.60e-01

CGCACGGGTAAACAGACGGCGCAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGTCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCAATCGCGAC  >  NC_000913/2662667‑2662930
                                                                                                                                      |                                                                                                                                 
cgcACGGGTAAACAGACGGCGCAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCtt                                                                                                                              <  2:1253849/140‑1 (MQ=255)
  cACGGGTAAACAGACGGCGCAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCa                                                                                                                            >  2:541089/1‑140 (MQ=255)
             aGACGGCGCAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTg                                                                                                                 >  2:1201357/1‑140 (MQ=255)
               aCGGCGCAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCt                                                                                                               >  2:440625/1‑140 (MQ=255)
                 ggCGCAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCg                                                                                                             >  2:1608095/1‑140 (MQ=255)
                 ggCGCAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCg                                                                                                             >  1:686372/1‑140 (MQ=255)
                 ggCGCAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCg                                                                                                             >  1:105513/1‑140 (MQ=255)
                   cgcAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGcc                                                                                                           <  2:575439/140‑1 (MQ=255)
                        tttATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGtttt                                                                                                      <  2:643678/140‑1 (MQ=255)
                        tttATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGtttt                                                                                                      <  1:132520/140‑1 (MQ=255)
                           aTTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCt                                                                                                   <  2:670077/140‑1 (MQ=255)
                           aTTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCt                                                                                                   <  1:327189/140‑1 (MQ=255)
                            ttCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTg                                                                                                  <  1:1347021/140‑1 (MQ=255)
                            ttCATCACCAGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTCTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCGCTTCATGCTCGACCTGCTCGCCGTTTTCCTg                                                                                                  <  1:1410594/140‑1 (MQ=255)
                                tcaCCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGtt                                                                                              >  2:564751/1‑140 (MQ=255)
                                 caCCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTg                                                                                             <  2:921845/140‑1 (MQ=255)
                                  aCCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTgc                                                                                            <  2:1027630/140‑1 (MQ=255)
                                    cTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTgcca                                                                                          >  2:1366020/1‑140 (MQ=255)
                                    cTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTgcca                                                                                          >  1:1292542/1‑140 (MQ=255)
                                       ccccGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTgccagcc                                                                                       <  2:962164/140‑1 (MQ=255)
                                           ggATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGc                                                                                   >  2:237432/1‑140 (MQ=255)
                                           ggATGGTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGcc                                                                                  >  2:696939/1‑140 (MQ=255)
                                            gATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGcc                                                                                  >  2:405591/1‑140 (MQ=255)
                                            gATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGcc                                                                                  <  2:817134/140‑1 (MQ=255)
                                            gATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGcc                                                                                  >  1:503506/1‑140 (MQ=255)
                                            gATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGcc                                                                                  <  1:564751/140‑1 (MQ=255)
                                            gATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGcc                                                                                  >  2:988128/1‑140 (MQ=255)
                                              tGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGTCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCAt                                                                                <  2:210330/140‑1 (MQ=255)
                                                 ttttCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATGCGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATgcg                                                                             >  1:150875/1‑140 (MQ=255)
                                                 ttttCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATgcg                                                                             <  1:405591/140‑1 (MQ=255)
                                                 ttttCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATgcg                                                                             <  2:986918/140‑1 (MQ=255)
                                                 ttttCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATgcg                                                                             <  2:105513/140‑1 (MQ=255)
                                                 ttttCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATgcg                                                                             >  1:1106221/1‑140 (MQ=255)
                                                 ttttCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATgcg                                                                             <  2:1024713/140‑1 (MQ=255)
                                                 gtttCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATgcg                                                                             <  1:696939/139‑1 (MQ=255)
                                                        ggATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCa                                                                      <  2:1338784/140‑1 (MQ=255)
                                                         gATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCAt                                                                     <  1:72882/140‑1 (MQ=255)
                                                         gATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCAt                                                                     <  1:1201357/140‑1 (MQ=255)
                                                         gATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCAt                                                                     <  1:237432/140‑1 (MQ=255)
                                                          aTAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATa                                                                    >  1:160157/1‑140 (MQ=255)
                                                                   gTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAAc                                                           >  1:999867/1‑140 (MQ=255)
                                                                        cagcagCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGaa                                                      <  2:1202373/140‑1 (MQ=255)
                                                                        cagcagCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGaa                                                      <  2:1339672/140‑1 (MQ=255)
                                                                           cagcGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCg                                                   >  1:865863/1‑140 (MQ=255)
                                                                             gcGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGcc                                                 >  1:850534/1‑140 (MQ=255)
                                                                             gcGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGcc                                                 <  1:1319330/140‑1 (MQ=255)
                                                                                tttGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATc                                              >  2:688216/1‑140 (MQ=255)
                                                                                tttGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATc                                              <  1:541089/140‑1 (MQ=255)
                                                                                  tGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGc                                            <  2:1292542/140‑1 (MQ=255)
                                                                                  tGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGc                                            >  2:1168390/1‑140 (MQ=255)
                                                                                   gTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGcc                                           <  1:1608095/140‑1 (MQ=255)
                                                                                     tCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAg                                         <  2:160157/140‑1 (MQ=255)
                                                                                        aGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGtt                                      >  2:1625016/1‑140 (MQ=255)
                                                                                        aGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACCGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGtt                                      >  2:1218571/1‑140 (MQ=255)
                                                                                            gACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGc                                  <  2:1106221/140‑1 (MQ=255)
                                                                                            gACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGc                                  <  2:999867/140‑1 (MQ=255)
                                                                                              ccATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGc                                            <  1:720490/128‑1 (MQ=255)
                                                                                              ccATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGc                                            >  2:720490/1‑128 (MQ=255)
                                                                                               cATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAg                               <  1:1218571/140‑1 (MQ=255)
                                                                                                aTAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGc                              <  2:833564/140‑1 (MQ=255)
                                                                                                aTAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGc                              <  1:440625/140‑1 (MQ=255)
                                                                                                 tAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCt                             <  2:503506/140‑1 (MQ=255)
                                                                                                 tAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCt                             <  1:1366020/140‑1 (MQ=255)
                                                                                                         cTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCg                     >  2:1341391/1‑140 (MQ=255)
                                                                                                         cTCCAGATCATCGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCg                     >  1:1429152/1‑140 (MQ=255)
                                                                                                                  atcGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCg            >  2:1444173/1‑140 (MQ=255)
                                                                                                                    cGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCa          >  1:609907/1‑140 (MQ=255)
                                                                                                                    cGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCa          >  2:178306/1‑140 (MQ=255)
                                                                                                                    cGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCa          >  1:937767/1‑140 (MQ=255)
                                                                                                                    cGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCa          >  2:1096292/1‑140 (MQ=255)
                                                                                                                    cGACCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCaa         >  2:1356299/1‑140 (MQ=255)
                                                                                                                      aCCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCAAt        <  1:1625016/140‑1 (MQ=255)
                                                                                                                      aCCAGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCAAt        <  2:850534/140‑1 (MQ=255)
                                                                                                                         aGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCAATcgc     <  2:686372/140‑1 (MQ=255)
                                                                                                                         aGCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCAATcgc     >  1:687451/1‑140 (MQ=255)
                                                                                                                          gCGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCAATcgcg    <  1:1444173/140‑1 (MQ=255)
                                                                                                                           cGGATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCAATCGCGa   <  1:1096292/140‑1 (MQ=255)
                                                                                                                            ggATACGGCGCCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCAATCGCGAc  <  1:688216/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                 
CGCACGGGTAAACAGACGGCGCAATTTATTCATCACCTGCCCCGGATGGTTTTCACGGATAAAACCGGTTGCCAGCAGCGTTTGTTCCAGATGACCATAAAAACGCTCCAGATCATCGACCAGCGGATACGGCGTCTCTTCATGCTCGACCTGCTCGCCGTTTTCCTGAGTTGCCAGCCAGGCCATGCGCACTTCATAGGCAATAACCTGAACCGCCATCGCCAGGTTCAGCGAGCTGTATTCCGGGTTAGCCGCAATCGCGAC  >  NC_000913/2662667‑2662930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: