BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,679,099	G→A	A90V (GCC→GTC)	yphF ←	putative ABC transporter periplasmic binding protein YphF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,679,099	0	G	A	100.0%	398.6 / NA	111	A90V (GCC→GTC)	yphF	putative ABC transporter periplasmic binding protein YphF
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (60/51); total (60/51)

Only 100 of 112 total aligned reads displayed.

CAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAG  >  NC_000913/2678963‑2679234

cAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACTAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACAt                                                                                                                                      <  2:725130/140‑1 (MQ=255)

      cGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACAt                                                                                                                                >  1:1592417/1‑140 (MQ=255)

        ccGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTa                                                                                                                              <  2:837209/140‑1 (MQ=255)

         cGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTAc                                                                                                                             >  2:1276408/1‑140 (MQ=255)

               atatTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCa                                                                                                                       <  2:411678/140‑1 (MQ=255)

                 atTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACg                                                                                                                     <  2:354272/140‑1 (MQ=255)

                 atTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACg                                                                                                                     <  1:564900/140‑1 (MQ=255)

                 atTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACg                                                                                                                     <  1:699400/140‑1 (MQ=255)

                 atTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACg                                                                                                                     >  2:639064/1‑140 (MQ=255)

                   ttATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAg                                                                                                                   <  1:786689/140‑1 (MQ=255)

                     aTCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAggg                                                                                                                 >  2:1295926/1‑140 (MQ=255)

                       cGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTa                                                                                                               >  2:802236/1‑140 (MQ=255)

                        gACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTAt                                                                                                              <  1:1276408/140‑1 (MQ=255)

                         aCCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATc                                                                                                             >  1:753966/1‑140 (MQ=255)

                         aCCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATc                                                                                                             <  2:713823/140‑1 (MQ=255)

                         aCCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATc                                                                                                             >  2:170997/1‑140 (MQ=255)

                         aCCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATc                                                                                                             >  2:1496497/1‑140 (MQ=255)

                         aCCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATc                                                                                                             <  2:85904/140‑1 (MQ=255)

                           ccccTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATcaa                                                                                                           >  1:1005729/1‑140 (MQ=255)

                           ccccTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATc                                                                                                             >  1:16225/1‑138 (MQ=255)

                           ccccTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATc                                                                                                             <  2:16225/138‑1 (MQ=255)

                            cccTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGTGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATcaac                                                                                                          >  2:1494164/1‑140 (MQ=255)

                                    aTTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTAc                                                                                                  >  1:782821/1‑140 (MQ=255)

                                    aTTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTAc                                                                                                  >  1:91010/1‑140 (MQ=255)

                                       aaTACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTActtt                                                                                               >  2:1130355/1‑140 (MQ=255)

                                        aTACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCGATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTActttc                                                                                              >  2:1475228/1‑140 (MQ=255)

                                         tACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTActttct                                                                                             >  1:198754/1‑140 (MQ=255)

                                             ggTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCg                                                                                         <  1:1138223/140‑1 (MQ=255)

                                              gtgtTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATcaaca                                                                                                         >  1:259451/1‑123 (MQ=255)

                                              gtgtTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGa                                                                                        >  1:556198/1‑140 (MQ=255)

                                              gtgtTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGa                                                                                        >  1:684707/1‑140 (MQ=255)

                                                 ttgtAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAat                                                                                     >  2:785448/1‑140 (MQ=255)

                                                 ttgtAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAat                                                                                     >  1:723287/1‑140 (MQ=255)

                                                  tgtAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAata                                                                                    <  2:1005729/140‑1 (MQ=255)

                                                  tgtAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAata                                                                                    <  2:91010/140‑1 (MQ=255)

                                                   gtAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAatat                                                                                   >  2:115939/1‑140 (MQ=255)

                                                   gtAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAatat                                                                                   >  1:1560705/1‑140 (MQ=255)

                                                   gtAGCAAATCACCGGAATGACCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAatat                                                                                   >  1:1617684/1‑140 (MQ=255)

                                                         aaTCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCg                                                                                         <  2:1375518/128‑1 (MQ=255)

                                                         aaTCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCg                                                                                         >  1:1375518/1‑128 (MQ=255)

                                                         aaTCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCt                                                                             >  2:1240530/1‑140 (MQ=255)

                                                         aaTCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCt                                                                             >  2:468999/1‑140 (MQ=255)

                                                         aaTCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCt                                                                             <  2:753966/140‑1 (MQ=255)

                                                          aTCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTg                                                                            >  1:1151092/1‑140 (MQ=255)

                                                            cACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTggg                                                                          >  1:448070/1‑140 (MQ=255)

                                                              ccGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCg                                                                        <  1:1463276/140‑1 (MQ=255)

                                                                  aaTGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAg                                                                    <  1:1496497/140‑1 (MQ=255)

                                                                    tGCCCGCTTCACTGGTGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGtt                                                                  <  1:1494164/140‑1 (MQ=255)

                                                                    tGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGtt                                                                  >  2:1514752/1‑140 (MQ=255)

                                                                      cccGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTc                                                                >  1:1236665/1‑140 (MQ=255)

                                                                      cccGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTc                                                                >  1:1556657/1‑140 (MQ=255)

                                                                      cccGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTc                                                                >  2:964922/1‑140 (MQ=255)

                                                                        cGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTa                                                              <  2:1560705/140‑1 (MQ=255)

                                                                           ttCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTa                                                           >  2:137453/1‑140 (MQ=255)

                                                                             cACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc                                                         <  1:468999/140‑1 (MQ=255)

                                                                             cACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc                                                         <  2:448070/140‑1 (MQ=255)

                                                                             cACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc                                                         <  1:1475228/140‑1 (MQ=255)

                                                                             cACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc                                                         <  1:785448/140‑1 (MQ=255)

                                                                             cACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc                                                         <  1:531587/140‑1 (MQ=255)

                                                                             cACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc                                                         <  2:1236665/140‑1 (MQ=255)

                                                                             cACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc                                                         <  1:639064/140‑1 (MQ=255)

                                                                             cACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAAc                                                         <  2:604430/140‑1 (MQ=255)

                                                                                     cgacgaACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTg                                                 >  2:525786/1‑140 (MQ=255)

                                                                                     cgacgaACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTg                                                 >  1:1279554/1‑140 (MQ=255)

                                                                                     cgacgaACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTg                                                 >  2:8866/1‑140 (MQ=255)

                                                                                       acgaACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTa                                               >  1:1055924/1‑140 (MQ=255)

                                                                                       acgaACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTa                                               >  2:1382308/1‑140 (MQ=255)

                                                                                            cGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAg                                          >  2:1081211/1‑140 (MQ=255)

                                                                                                    cTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTa                                               >  2:644811/1‑127 (MQ=255)

                                                                                                    cTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTa                                               <  1:644811/127‑1 (MQ=255)

                                                                                                    cTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCttt                                  >  2:1377252/1‑140 (MQ=255)

                                                                                                    cTACTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCttt                                  >  1:42335/1‑140 (MQ=255)

                                                                                                       cTGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGc                               >  1:615657/1‑140 (MQ=255)

                                                                                                        tGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGcc                              >  1:210242/1‑140 (MQ=255)

                                                                                                        tGCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGcc                              <  2:210242/140‑1 (MQ=255)

                                                                                                         gCCATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCg                             >  1:78034/1‑140 (MQ=255)

                                                                                                           cATTTTCAGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCa                           <  1:1377252/140‑1 (MQ=255)

                                                                                                                  aGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGaa                    <  1:1295926/140‑1 (MQ=255)

                                                                                                                  aGACACTGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGaa                    <  1:973030/140‑1 (MQ=255)

                                                                                                                        tGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCt              >  1:685502/1‑140 (MQ=255)

                                                                                                                        tGCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCt              >  1:416774/1‑140 (MQ=255)

                                                                                                                         gCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTg             <  1:1063310/140‑1 (MQ=255)

                                                                                                                         gCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTg             >  2:1582148/1‑140 (MQ=255)

                                                                                                                         gCCGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTg             >  1:37860/1‑140 (MQ=255)

                                                                                                                          ccGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGa            >  2:308260/1‑140 (MQ=255)

                                                                                                                          ccGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGa            >  2:1194937/1‑140 (MQ=255)

                                                                                                                          ccGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGa            >  2:1084851/1‑140 (MQ=255)

                                                                                                                           cGATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGAc           <  2:685502/140‑1 (MQ=255)

                                                                                                                            gATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACg          <  2:42335/140‑1 (MQ=255)

                                                                                                                            gATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACg          <  2:198754/140‑1 (MQ=255)

                                                                                                                            gATAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACg          <  1:802236/140‑1 (MQ=255)

                                                                                                                             aTAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGc         >  2:162455/1‑140 (MQ=255)

                                                                                                                             aTAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGc         >  2:1566399/1‑140 (MQ=255)

                                                                                                                              tAAAATAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCa        <  1:315618/140‑1 (MQ=255)

                                                                                                                                aaaTAATGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACt      <  2:723287/140‑1 (MQ=255)

                                                                                                                                 aataatGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTc     <  1:1514752/140‑1 (MQ=255)

                                                                                                                                 aataatGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTc     <  1:1382308/140‑1 (MQ=255)

                                                                                                                                  ataatGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTcc    >  2:298028/1‑140 (MQ=255)

                                                                                                                                  ataatGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTcc    <  2:37860/140‑1 (MQ=255)

                                                                                                                                    aatGACATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAg  <  2:615657/140‑1 (MQ=255)

CAGATACGCCGAGACATATTTATCGACCCCCTTTTGATTAATACAGGTGTTGTAGCAAATCACCGGAATGCCCGCTTCACTGGCGCGACGAACGGTACGGCTACTGCCATTTTCAGACACTGCCGATAAAATAATGGCATCGACATTACGCGCCACGAGGGTATCAACAAAGGTACTTTCTTTCGAAATATCACCCTGGGCGTTAGTTTCTATTAACTGAACTTGTACTGAGGAATCTTTTGCCGCATCCTGAACGCCCTGACGCACTCCAG  >  NC_000913/2678963‑2679234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`