BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,777,249	T→C	C45C (TGT→TGC)	yfjZ →	CP4‑57 prophage; putative antitoxin of the YpjF‑YfjZ toxin‑antitoxin system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,777,249	0	T	C	100.0%	393.2 / NA	109	C45C (TGT→TGC)	yfjZ	CP4‑57 prophage; putative antitoxin of the YpjF‑YfjZ toxin‑antitoxin system
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (53/56); total (53/56)

Only 100 of 118 total aligned reads displayed.

TGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGTCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGAAGCCGATACT  >  NC_000913/2777116‑2777381

tgaGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACGAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAg                                                                                                                                <  2:1591000/140‑1 (MQ=255)

 gaGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGc                                                                                                                               <  1:9551/140‑1 (MQ=255)

  aGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGc                                                                                                                               >  2:931019/1‑139 (MQ=255)

  aGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGc                                                                                                                               <  1:931019/139‑1 (MQ=255)

  aGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCt                                                                                                                              >  1:1205542/1‑140 (MQ=255)

  aGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCt                                                                                                                              >  1:1275452/1‑140 (MQ=255)

    cAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTgg                                                                                                                            <  1:475873/140‑1 (MQ=255)

     aaCACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGa                                                                                                                           <  2:154491/140‑1 (MQ=255)

       caccacATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGAtg                                                                                                                         >  2:1153843/1‑140 (MQ=255)

            caTGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTa                                                                                                                    >  1:1290412/1‑140 (MQ=255)

                gggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTc                                                                                                                <  1:1500657/140‑1 (MQ=255)

                gggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTc                                                                                                                <  1:1188729/140‑1 (MQ=255)

                 ggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGc                                                                                                                               <  1:721582/124‑1 (MQ=255)

                 ggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGc                                                                                                                               >  2:721582/1‑124 (MQ=255)

                 ggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTcc                                                                                                               >  1:657850/1‑140 (MQ=255)

                 ggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTcc                                                                                                               >  1:72410/1‑140 (MQ=255)

                 ggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTcc                                                                                                               >  1:1601258/1‑140 (MQ=255)

                 ggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTcc                                                                                                               >  1:1563731/1‑140 (MQ=255)

                 ggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTcc                                                                                                               >  1:1402690/1‑140 (MQ=255)

                 ggCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTcc                                                                                                               >  2:663573/1‑140 (MQ=255)

                  gCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCca                                                                                                              <  2:1493510/140‑1 (MQ=255)

                  gCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCca                                                                                                              >  1:1430814/1‑140 (MQ=255)

                       cAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACAttt                                                                                                         >  2:315025/1‑140 (MQ=255)

                        aGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGTTATTTCCACAtttt                                                                                                        <  2:1205542/140‑1 (MQ=255)

                          cGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTAt                                                                                                      <  2:1151253/140‑1 (MQ=255)

                          cGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTAt                                                                                                      <  1:1494961/140‑1 (MQ=255)

                          cGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTAt                                                                                                      <  1:601348/140‑1 (MQ=255)

                             gaTATCACGCCGCGCCTGGGGGCACGTCTGGGGCAGGGGGGCAACCAGCTGCACTATCTGGCTGACCGGGGCAGTATCACCCGTAAGTTTAGTGGAGCCGAAAGCCCTAAGCTGGATGTGGTATTTCCCCATTTTATCAg                                                                                                   <  2:385346/140‑1 (MQ=255)

                             gaTATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAg                                                                                                   <  1:1146952/140‑1 (MQ=255)

                             gaTATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAg                                                                                                   <  1:1145222/140‑1 (MQ=255)

                              atatCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGc                                                                                                  <  1:527014/140‑1 (MQ=255)

                                  cACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGa                                                                                              <  2:308334/140‑1 (MQ=255)

                                   aCGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGAt                                                                                             <  2:1488434/140‑1 (MQ=255)

                                       cgcgCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATagag                                                                                         >  2:107721/1‑140 (MQ=255)

                                       cgcgCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATagag                                                                                         >  1:725722/1‑140 (MQ=255)

                                       cgcgCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATagag                                                                                         >  1:833797/1‑140 (MQ=255)

                                        gcgcCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGt                                                                                        <  2:725722/140‑1 (MQ=255)

                                         cgcCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTc                                                                                       >  2:1258066/1‑140 (MQ=255)

                                           ccTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCg                                                                                      <  2:1064439/139‑1 (MQ=255)

                                           ccTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCg                                                                                      >  1:1064439/1‑139 (MQ=255)

                                             tGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATg                                                                                   <  2:606837/140‑1 (MQ=255)

                                               ggAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCt                                                                                 <  2:856365/140‑1 (MQ=255)

                                               ggAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCt                                                                                 <  2:72410/140‑1 (MQ=255)

                                                  gcgcGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGAc                                                                              <  1:972620/137‑1 (MQ=255)

                                                  gCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGAc                                                                              <  1:531791/140‑1 (MQ=255)

                                                  gCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGAc                                                                              <  2:1114970/140‑1 (MQ=255)

                                                       tCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTg                                                                         <  2:329290/140‑1 (MQ=255)

                                                        cTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTgg                                                                        <  1:803096/140‑1 (MQ=255)

                                                         tGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGt                                                                       >  2:671899/1‑140 (MQ=255)

                                                          ggTGCAGGAGGGCAACCAGCTGCACTATCTGGCCGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTg                                                                      >  2:1118808/1‑140 (MQ=255)

                                                           gTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGa                                                                     >  2:963880/1‑140 (MQ=255)

                                                           gTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGa                                                                     >  1:1502090/1‑140 (MQ=255)

                                                                 gaggGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGGATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGaa                                                               >  2:1510822/1‑140 (MQ=255)

                                                                   gggCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATc                                                             >  2:704755/1‑140 (MQ=255)

                                                                    ggCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATcc                                                            <  2:460503/140‑1 (MQ=255)

                                                                          cgacTGCATTATCTGGCTGACCGGGCCAGCATCACCGGCAAGTTCAGTGACATCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCa                                                      <  1:1011334/137‑1 (MQ=17)

                                                                              tGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGcc                                                  <  2:1275452/140‑1 (MQ=255)

                                                                               gCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGccc                                                 <  2:657850/140‑1 (MQ=255)

                                                                                   tATCTGGCTGACCGGGCCAGTATCACGGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACTTTTTATCAGCCAGACAGAGTCGATGCTGCCCTCTGGTGAACTGAACCCCCGCCATGCCCAATg                                             <  2:1430814/140‑1 (MQ=25)

                                                                                     tCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCa                                                >  2:1490815/1‑135 (MQ=255)

                                                                                     tCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCa                                                <  1:1490815/135‑1 (MQ=255)

                                                                                     tCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCg                                           <  1:315025/140‑1 (MQ=255)

                                                                                     tCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCg                                           <  1:1301246/140‑1 (MQ=255)

                                                                                      cTGGCTGACGGGGCTAGTATCCCCGATAAGTTTAGTGACGCCGAATGCCCTAAGCGGGATGGGGTTTTCCCACTTTTAATCAGCCAGATAGAGGGGAGGCGGACCACTGGAGAATTGAATCCCCGCTATGCCCAATGCGt                                          <  2:1563731/140‑1 (MQ=255)

                                                                                      cTGGCCGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGt                                          <  1:1118808/140‑1 (MQ=255)

                                                                                        ggCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCa                                        <  2:73550/140‑1 (MQ=255)

                                                                                        ggCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCa                                        <  2:833797/140‑1 (MQ=255)

                                                                                        ggCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCa                                        <  1:1450065/140‑1 (MQ=255)

                                                                                          ctgccggggCCAGTATCACCGGTAAGTTTAGTGACCCCGAATGCCCTAAGCTGGAGGTGGTATTTCCACATTTTATCAGCAAGATAGAGTCGTTGCTCACCTTTGGTGAATTGAATCCCCGCCATGCCCAATGCGTCAcc                                      <  2:1601258/134‑1 (MQ=255)

                                                                                          cTGCCCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCAcc                                      <  2:1499312/140‑1 (MQ=255)

                                                                                          cTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCAcc                                      >  1:1353667/1‑140 (MQ=255)

                                                                                          cTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCAcc                                      <  1:1410209/140‑1 (MQ=255)

                                                                                          cTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCACAATGCGTCAcc                                      <  1:695415/140‑1 (MQ=255)

                                                                                             aCCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCa                                                <  2:350641/127‑1 (MQ=255)

                                                                                               cGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGt                                          <  2:324459/131‑1 (MQ=255)

                                                                                               cGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGt                                          >  1:324459/1‑131 (MQ=255)

                                                                                               cGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTa                                 >  1:1333556/1‑140 (MQ=255)

                                                                                               cGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTa                                 >  1:1329375/1‑140 (MQ=255)

                                                                                                  gCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACca                              >  1:1409588/1‑140 (MQ=255)

                                                                                                       tATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACg                         >  2:406814/1‑140 (MQ=255)

                                                                                                       tATCACCGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACg                         >  2:431270/1‑140 (MQ=255)

                                                                                                            ccGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACcaca                            >  1:1321320/1‑132 (MQ=255)

                                                                                                            ccGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACcaca                            <  2:1321320/132‑1 (MQ=255)

                                                                                                            ccGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGtttt                    >  2:58833/1‑140 (MQ=255)

                                                                                                            ccGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGtttt                    >  2:872683/1‑140 (MQ=255)

                                                                                                            ccGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGtttt                    >  2:378776/1‑140 (MQ=255)

                                                                                                            ccGGTAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGtttt                    >  2:191924/1‑140 (MQ=255)

                                                                                                                tAAGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCt                >  1:313865/1‑140 (MQ=255)

                                                                                                                 aaGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTg               >  1:1263969/1‑140 (MQ=255)

                                                                                                                 aaGTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGCACCACAACGGTTTTACCTg               >  1:956885/1‑140 (MQ=255)

                                                                                                                   gTTTAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCg             <  1:1398429/140‑1 (MQ=255)

                                                                                                                    tttAGTGCCGCCGAATGCCCTAAGCTGGATGTGGTATTTCCAATTTTTATCAGCCAGATAGAGTCGATGCGGACCACTGGTAAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGa            <  2:1186126/140‑1 (MQ=255)

                                                                                                                    tttAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGa            <  1:9809/140‑1 (MQ=255)

                                                                                                                    tttAGTGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGa            <  1:191924/140‑1 (MQ=255)

                                                                                                                         tGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGa            <  2:123712/135‑1 (MQ=255)

                                                                                                                         tGACGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGa            >  1:123712/1‑135 (MQ=255)

                                                                                                                            cGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGAAGCCGATa    <  1:1258066/140‑1 (MQ=255)

                                                                                                                            cGCCGAATGCCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAACCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGAAGCCGATa    <  1:1153843/140‑1 (MQ=255)

                                                                                                                              ccGAATGCCCTAAGCTGGTTGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGCCCCCTGGTGACCTGAACCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGAAGCCGATAct  <  2:638702/140‑1 (MQ=255)

                                                                                                                              ccGAATGCCCTAAGCTGGATGTGGTTTTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAACCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGAAGCCGATAct  <  2:271136/140‑1 (MQ=255)

TGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGTCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGAAGCCGATACT  >  NC_000913/2777116‑2777381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`