Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,673,621	C→T	intergenic (‑120/‑292)	mdtJ ← / → tqsA	multidrug/spermidine efflux pump membrane subunit MdtJ/autoinducer 2 exporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,673,621	0	C	T	100.0%	221.9 / NA	63	intergenic (‑120/‑292)	mdtJ/tqsA	multidrug/spermidine efflux pump membrane subunit MdtJ/autoinducer 2 exporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (31/32);  total (31/32)

ATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCT  >  NC_000913/1673485‑1673739                                                                                                                                         |                                                                                                                       aTCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGcc                                                                                                                     >  2:30388/1‑140 (MQ=255)  tCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCa                                                                                                                    >  2:227046/1‑140 (MQ=255)   ccAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAg                                                                                                                   >  2:727365/1‑140 (MQ=255)     aataaataTACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGtg                                                                                                                 <  1:30388/140‑1 (MQ=255)            ataCATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCa                                                                                                          >  2:715579/1‑140 (MQ=255)               cATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCt                                                                                                       <  1:322046/140‑1 (MQ=255)                  tGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACg                                                                                                    >  2:136113/1‑140 (MQ=255)                  tGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACg                                                                                                    >  1:780289/1‑140 (MQ=255)                    tCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGt                                                                                                                  >  2:345461/1‑124 (MQ=255)                    tCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGt                                                                                                                  <  1:345461/124‑1 (MQ=255)                    tCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAg                                                                                                  >  1:336761/1‑140 (MQ=255)                    tCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAg                                                                                                  >  1:130028/1‑140 (MQ=255)                      cTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCa                                                                                                <  1:244223/140‑1 (MQ=255)                         ctcCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGa                                                                                             >  1:741857/1‑140 (MQ=255)                         ctcCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGa                                                                                             >  1:665743/1‑140 (MQ=255)                         ctcCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGa                                                                                             >  2:116112/1‑140 (MQ=255)                         ctcCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGa                                                                                             <  2:336761/140‑1 (MQ=255)                            cTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAg                                                                                          >  1:666645/1‑140 (MQ=255)                              gCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGa                                                                                                   >  1:222472/1‑129 (MQ=255)                              gCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGa                                                                                                   <  2:222472/129‑1 (MQ=255)                              gCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAg                                                                                          <  2:171536/138‑1 (MQ=255)                              gCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAg                                                                                          <  1:425801/138‑1 (MQ=255)                              gCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAg                                                                                          >  1:171536/1‑138 (MQ=255)                              gCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAg                                                                                          >  2:425801/1‑138 (MQ=255)                              gCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTg                                                                                        >  1:710836/1‑140 (MQ=255)                                aaGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGa                                                                                      <  1:715579/140‑1 (MQ=255)                                 agagAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGAt                                                                                     <  1:258637/140‑1 (MQ=255)                                 agagAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGAt                                                                                     <  1:727365/140‑1 (MQ=255)                                  gagaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATg                                                                                    <  2:642101/140‑1 (MQ=255)                                   agaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGa                                                                                             >  2:477992/1‑130 (MQ=255)                                   agaATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGa                                                                                             <  1:477992/130‑1 (MQ=255)                                     aaTTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAgg                                                                                 >  1:416942/1‑140 (MQ=255)                                     aaTTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAgg                                                                                 >  1:858801/1‑140 (MQ=255)                                            ttAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAg                                                                          <  2:281691/140‑1 (MQ=255)                                                  ttCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGGGGTACGAAGATGGGt                                                                    <  2:18319/140‑1 (MQ=255)                                                  ttCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGt                                                                    <  2:346374/140‑1 (MQ=255)                                                    cGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTaa                                                                  <  1:136113/140‑1 (MQ=255)                                                       ttAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATg                                                               <  1:702084/140‑1 (MQ=255)                                                        tAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGt                                                              <  2:741857/140‑1 (MQ=255)                                                                cGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATa                                                      >  1:125877/1‑140 (MQ=255)                                                                     ccAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGt                                                              <  2:58718/127‑1 (MQ=255)                                                                     ccAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGt                                                              >  1:58718/1‑127 (MQ=255)                                                                     ccAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTc                                                 >  1:231377/1‑140 (MQ=255)                                                                              agtGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACaaa                                        <  1:798512/140‑1 (MQ=255)                                                                              agtGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACaaa                                        <  2:858801/140‑1 (MQ=255)                                                                              agtGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACaaa                                        <  2:416942/140‑1 (MQ=255)                                                                               gtGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAAt                                       <  2:666645/140‑1 (MQ=255)                                                                                     aaGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCa                                 <  1:467059/140‑1 (MQ=255)                                                                                     aaGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCa                                 >  1:799804/1‑140 (MQ=255)                                                                                     aaGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCa                                 <  1:116112/140‑1 (MQ=255)                                                                                          ccGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCataata                            >  1:27354/1‑140 (MQ=255)                                                                                             cgcATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTa                         >  1:305694/1‑140 (MQ=255)                                                                                             cgcATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTa                         >  1:722419/1‑140 (MQ=255)                                                                                             cgcATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTa                         <  2:780289/140‑1 (MQ=255)                                                                                                  aGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCataa                              >  2:324804/1‑130 (MQ=255)                                                                                                  aGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCataa                              <  1:324804/130‑1 (MQ=255)                                                                                                  aGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAAtt                    <  1:227046/140‑1 (MQ=255)                                                                                                      cAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATcc                <  2:665743/140‑1 (MQ=255)                                                                                                       aaGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCg               <  2:722419/140‑1 (MQ=255)                                                                                                             tGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAgtgt         >  1:23769/1‑140 (MQ=255)                                                                                                             tGGCAGAAGAAAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAgtgt         >  1:577867/1‑140 (MQ=255)                                                                                                                   aagaaAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTtc   >  2:650864/1‑140 (MQ=255)                                                                                                                    agaaAGGACTAAAGCGCGTTGTGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTtct  <  1:650864/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                       ATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCT  >  NC_000913/1673485‑1673739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑