Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,442,146	0	A	G	28.2%	134.2 / 22.8	78	S11P (TCC→CCC)	msrA	methionine sulfoxide reductase A
Reads supporting (aligned to +/- strand):  ref base A (13/43);  new base G (22/0);  total (35/43)
Fisher's exact test for biased strand distribution p-value = 1.04e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATATTT  >  NC_000913/4442014‑4442285                                                                                                                                      |                                                                                                                                             cccAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAccggg                                                                                                                                       >  2:274806/1‑137 (MQ=255) cccAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGa                                                                                                                                       <  1:678729/140‑1 (MQ=255) cccAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGa                                                                                                                                       <  1:742081/140‑1 (MQ=255)    aGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACNNCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGc                                                                                                                                    <  1:274806/140‑1 (MQ=255)    aGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGc                                                                                                                                    >  1:293537/1‑140 (MQ=255)         caacCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCttttt                                                                                                                               <  2:53696/140‑1 (MQ=255)           acCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTTGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGAt                                                                                                                                      >  2:1117061/1‑131 (MQ=255)           acCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTTGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGAt                                                                                                                                      <  1:1117061/131‑1 (MQ=255)           acCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTAt                                                                                                                             >  1:588069/1‑140 (MQ=255)           acCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTAt                                                                                                                             >  2:747922/1‑140 (MQ=255)           acCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCttttttt                                                                                                                             >  2:349902/1‑138 (MQ=255)           acCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCttttttt                                                                                                                             >  1:323271/1‑138 (MQ=255)           acCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCttttttt                                                                                                                             >  2:662829/1‑138 (MQ=255)            cccATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATc                                                                                                                            <  2:293537/140‑1 (MQ=255)            cccATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATc                                                                                                                            <  1:940148/140‑1 (MQ=255)               aTCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCaaa                                                                                                                         <  2:1001098/140‑1 (MQ=255)                         tGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCttttt                                                                                                                               <  1:138441/124‑1 (MQ=255)                         tGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCttttt                                                                                                                               >  2:138441/1‑124 (MQ=255)                          ggCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATgg                                                                                                              <  2:568554/140‑1 (MQ=255)                               tctcCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCg                                                                                                         <  1:349902/140‑1 (MQ=255)                                    aTTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCtctc                                                                                                    >  1:993063/1‑140 (MQ=255)                                     ttCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTTTTAAATAAAATCATGGTGTCGCTCTcc                                                                                                   >  2:708110/1‑140 (MQ=255)                                       ccGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGCGGGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTccc                                                                                                  <  1:121491/140‑1 (MQ=255)                                          tCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTTTCAAATAAAATCATGGTGTCGCTCTCCCGaaa                                                                                              >  2:93158/1‑140 (MQ=255)                                              gTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCg                                                                                          <  2:993063/140‑1 (MQ=255)                                                aCATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGt                                                                                        <  1:858795/140‑1 (MQ=255)                                                  aTTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCa                                                                                      <  1:915347/140‑1 (MQ=255)                                                   ttGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑t                                                                                    <  1:86888/140‑1 (MQ=255)                                                    tGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGCGGCTTTTTTTCAAAAAAACTCATGGGGTCGCTCTCCCGAAAAACGGTCC‑tt                                                                                   >  2:846568/1‑140 (MQ=255)                                                    tGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCTTTTTATTAAAAAAAATCATGGTGTCGCTCTCCCGAAAACCGGTCA‑tt                                                                                   >  2:1215785/1‑140 (MQ=255)                                                    tGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑tt                                                                                   <  1:708042/140‑1 (MQ=255)                                                    tGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑tt                                                                                   <  1:510853/140‑1 (MQ=255)                                                    tGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑tt                                                                                   <  1:747922/140‑1 (MQ=255)                                                    acagcATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑tt                                                                                   <  1:78444/136‑1 (MQ=255)                                                      gTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTgg                                                                                 >  1:428336/1‑140 (MQ=255)                                                      gTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCTTTTTTTCAAATAAACTCATGGGGTCGCTCTCCCGAAAAACGGGCA‑TTgg                                                                                 >  2:400366/1‑140 (MQ=255)                                                      gTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCTTTTTTTCAAAAAAAATCATGGGGTCGCTCTCCCGAAAAACGGGCA‑TTgg                                                                                 >  2:858795/1‑140 (MQ=255)                                                        cATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTTTTAAATAAAATCATGGGGTTGCTCTCCCCAAAATCGGGCA‑TTtggg                                                                               >  2:380918/1‑140 (MQ=255)                                                        cATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCTTTTTTTCAAATAAAATCATGGGGTCGCTCTCCCCAAAATCGGGCA‑TTtggg                                                                               >  2:70380/1‑140 (MQ=255)                                                         aTTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCTTTTTTTCAAATAAAATCATGGTGTCGCTCTCCCGAAAAACGGGCA‑TTtgggg                                                                              >  2:170376/1‑139 (MQ=255)                                                         aTTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGt                                                                              <  2:323271/140‑1 (MQ=255)                                                         aTTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGt                                                                              >  1:560357/1‑140 (MQ=255)                                                           tGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTa                                                                            <  1:1215785/140‑1 (MQ=255)                                                           tGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTa                                                                            <  1:352493/140‑1 (MQ=255)                                                              gTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAgg                                                                         <  1:708110/140‑1 (MQ=255)                                                                gACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTa                                                                            >  2:327067/1‑135 (MQ=255)                                                                gACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCTTTTTTTTAAATAAACTCTTGGGGTTCCTCTCCCGGAAATCGGTCATTTGGGGTTAGGGt                                                                        >  2:583021/1‑140 (MQ=255)                                                                gACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTa                                                                            <  1:327067/135‑1 (MQ=255)                                                                gACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGGTAAGGtt                                                                       >  1:1153356/1‑140 (MQ=255)                                                                gACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGGGTCGCTCTCCCGAAAATCGGGCA‑TTGGGGTTAAGGtt                                                                       >  2:186278/1‑140 (MQ=255)                                                                gACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAAATCATGGTGGCGCTCTCCCGAAAATCGGTCA‑TTGGGGGTAAgggt                                                                       >  2:524106/1‑138 (MQ=255)                                                                  ccGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGT‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGt                                                                     <  2:207439/140‑1 (MQ=255)                                                                   cGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTTTCAAATAAAATCATGGTGTCGCTCTCCCGAAAATCGGGCA‑TTGGGGGTAAGGtctgt                                                                    >  2:78444/1‑136 (MQ=255)                                                                       gACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAAACAGAGGCTTTTTTTTAAATAAAATCATGGTGTTGCTCTCCCCCAAATCGGGCA‑TTTGGGGTTAGGGTGTAACaa                                                                >  2:300091/1‑140 (MQ=255)                                                                         ccGCATGCAGCGTGGCTACGGTCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAaga                                                              <  2:1153356/140‑1 (MQ=255)                                                                           gCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAgg                                                            <  1:583021/140‑1 (MQ=255)                                                                            cATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTTTCAAATAAAATCATGGGGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGGTAAGGTTGTAACAAGAggg                                                           >  1:806781/1‑139 (MQ=255)                                                                            cATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGc                                                           >  1:511551/1‑140 (MQ=255)                                                                             aTGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCg                                                          <  1:485896/140‑1 (MQ=255)                                                                             aTGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGGTAAGGTTGTAACAAGAGGCg                                                          >  1:683648/1‑140 (MQ=255)                                                                                   cGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTg                                                    <  2:588069/140‑1 (MQ=255)                                                                                    gTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGc                                                   <  1:1053114/140‑1 (MQ=255)                                                                                    gTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGc                                                   <  1:846568/140‑1 (MQ=255)                                                                                    gTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGc                                                   <  1:1023464/140‑1 (MQ=255)                                                                                      ggCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                 <  1:671465/140‑1 (MQ=255)                                                                                      ggCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                 <  2:428336/140‑1 (MQ=255)                                                                                      ggCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                 <  2:467990/140‑1 (MQ=255)                                                                                        cTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCTTTTTTTTTAATAAAATCATGGGGTCGCTCTCCCCAAAAAAGGGCA‑TTGGGGGTAAGGTTGGAAAAAGAGGCGGATTTGtacac                                               >  2:671465/1‑140 (MQ=255)                                                                                             ggCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAAACAGATGCTTTTTTTCAAATAAAATCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGGTGTAACAAGAGGCGGATTTTCACACAATaa                                          >  2:1023464/1‑140 (MQ=255)                                                                                             ggCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                 >  2:694437/1‑133 (MQ=255)                                                                                             ggCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGcac                                                 <  1:694437/133‑1 (MQ=255)                                                                                             ggCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATaa                                          <  1:690784/140‑1 (MQ=255)                                                                                                aTCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAacca                                       <  1:1174935/140‑1 (MQ=255)                                                                                                aTCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAacca                                       <  1:300091/140‑1 (MQ=255)                                                                                                 tCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAaccac                                      >  2:355540/1‑140 (MQ=255)                                                                                                 tCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAAACAGATGCTTTTTTTCAAATAAAATCATGGGGTCGCTCTCCCGAAAAACGGGCA‑TTGGGGGTAAGGGTGTAACAAGAGGCGTATTTTCACACAATAaccac                                      >  2:690784/1‑140 (MQ=255)                                                                                                  cGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGGAACCAGATGCTTTTTATCAAATAAACTCATGGGGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAaccacc                                     >  1:431551/1‑140 (MQ=255)                                                                                                  cGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGGTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAaccacc                                     >  1:353250/1‑140 (MQ=255)                                                                                                       tgtTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGaa                                <  1:380918/140‑1 (MQ=255)                                                                                                        gtTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAAt                               <  1:524106/140‑1 (MQ=255)                                                                                                        gtTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAAt                               <  1:355540/140‑1 (MQ=255)                                                                                                                 aggcaggGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGGGTCGCTCTCCCGAAAATCGGGCA‑TTGGGGGTAAGGTTGTAACAAGAGGCGTATTTGCACACAAAAACCACCGTGAATAGGTCTaaa                      >  1:930026/1‑140 (MQ=255)                                                                                                                 aggcaggGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAAATCATGGGGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGGTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGGCTaaa                      >  1:245069/1‑140 (MQ=255)                                                                                                                             ggc‑ggGGGGAAACAGATGCTTTTTTTCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATaaa          >  2:111838/1‑139 (MQ=255)                                                                                                                                      aaaCCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATAttt  <  1:1263945/140‑1 (MQ=255)                                                                                                                                      aaaCCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATAttt  <  2:511551/140‑1 (MQ=255)                                                                                                                                      aaaCCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATAttt  <  1:662829/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                             CCCAGAAACAACCCATCGCAAAAATGGCAATCTCCATTCCGTCAGGTACATTGGTCATTGAGTGACCGTTGACCGCATGCAGCGTGGCTACGGGCATCGGGGTGTTACGTCCAGGCAGGGCATCGGC‑GGGGGAAACCAGATGCTTTTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCA‑TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATATTT  >  NC_000913/4442014‑4442285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑