BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,783,288	G→A	pseudogene (17/240 nt)	pinH ←	putative invertase fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,783,288	0	G	A	100.0%	407.5 / NA	117	pseudogene (17/240 nt)	pinH	putative invertase fragment
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (60/57); total (60/57)

Only 100 of 118 total aligned reads displayed.

CGAAAGTTAATACCACGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGGACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAGGAAAGTTGAACCAG  >  NC_000913/2783153‑2783422

cGAAAGTTAATACCACGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAAcct                                                                                                                                    <  1:1017639/140‑1 (MQ=255)

cGAAAGTTAATACCACGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAAcct                                                                                                                                    >  1:1248908/1‑140 (MQ=255)

 gAAAGTTAATACCACGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAAcctc                                                                                                                                   >  1:1154193/1‑140 (MQ=255)

     gTTAATACCACGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGc                                                                                                                               <  1:142944/140‑1 (MQ=255)

       tAATACCACGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCa                                                                                                                             <  1:911176/140‑1 (MQ=255)

            ccACGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGtt                                                                                                                        >  1:499244/1‑140 (MQ=255)

               cGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTa                                                                                                                     >  1:384825/1‑140 (MQ=255)

               cGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTa                                                                                                                     >  2:918819/1‑140 (MQ=255)

               cGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTa                                                                                                                     >  1:69146/1‑140 (MQ=255)

                gTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCTCGGTTTTAc                                                                                                                    <  2:6347/140‑1 (MQ=255)

                gTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTAc                                                                                                                    >  2:863478/1‑140 (MQ=255)

                 ttCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACg                                                                                                                   <  2:499244/140‑1 (MQ=255)

                 ttCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACg                                                                                                                   <  1:331284/140‑1 (MQ=255)

                 ttCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACg                                                                                                                   <  1:1239288/140‑1 (MQ=255)

                 ttCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACg                                                                                                                   <  1:1009325/140‑1 (MQ=255)

                  tCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGt                                                                                                                  >  2:93429/1‑140 (MQ=255)

                   cGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGtt                                                                                                                 >  2:401452/1‑140 (MQ=255)

                     cacaGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGa                                                                                                               <  2:152380/140‑1 (MQ=255)

                     cacaGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGa                                                                                                               <  2:346942/140‑1 (MQ=255)

                     cacaGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGa                                                                                                               <  2:1154193/140‑1 (MQ=255)

                       caGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAg                                                                                                             >  1:321080/1‑140 (MQ=255)

                       caGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAg                                                                                                             <  2:1248908/140‑1 (MQ=255)

                          ctcctcCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACg                                                                                                                   >  1:1181604/1‑131 (MQ=255)

                          ctcctcCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACg                                                                                                                   <  2:1181604/131‑1 (MQ=255)

                          ctcctcCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTgg                                                                                                          >  2:26362/1‑140 (MQ=255)

                           tcctccAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTTCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGt                                                                                                         <  1:324818/140‑1 (MQ=255)

                           tcctccAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGt                                                                                                         <  2:655731/140‑1 (MQ=255)

                              tccAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAAc                                                                                                      <  2:915660/140‑1 (MQ=255)

                                   cAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGa                                                                                                 <  1:1163044/140‑1 (MQ=255)

                                    aGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAg                                                                                                >  2:1161914/1‑140 (MQ=255)

                                      cACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTTACCCTGAGCa                                                                                              >  1:867629/1‑140 (MQ=255)

                                       aCGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCt                                                                                                   >  1:44433/1‑134 (MQ=255)

                                       aCGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCt                                                                                                   <  2:44433/134‑1 (MQ=255)

                                       aCGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCAc                                                                                             >  1:1160055/1‑140 (MQ=255)

                                        cGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACg                                                                                            <  1:1161914/140‑1 (MQ=255)

                                          aCAAGATGCCCCATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAg                                                                                                <  2:550736/134‑1 (MQ=255)

                                          aCAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAg                                                                                                >  1:550736/1‑134 (MQ=255)

                                                    acaTACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTtcagt                                                                                <  2:709615/140‑1 (MQ=255)

                                                     caTACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGttctt                                                                                    >  1:294901/1‑135 (MQ=255)

                                                     caTACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGttctt                                                                                    <  2:294901/135‑1 (MQ=255)

                                                      aTACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTtcagtca                                                                              >  1:153123/1‑140 (MQ=255)

                                                      aTACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTtcagtca                                                                              >  1:740391/1‑140 (MQ=255)

                                                       tACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTtcagtcag                                                                             <  1:863478/140‑1 (MQ=255)

                                                          tGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCg                                                                          <  2:570273/140‑1 (MQ=255)

                                                          tGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCg                                                                          <  1:93429/140‑1 (MQ=255)

                                                          tGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCg                                                                          >  1:1246192/1‑140 (MQ=255)

                                                          tGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCg                                                                          >  2:340255/1‑140 (MQ=255)

                                                          tGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCg                                                                          <  1:566338/140‑1 (MQ=255)

                                                            cgcCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCgtg                                                                        >  1:1019617/1‑140 (MQ=255)

                                                            cgcCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCgtg                                                                        >  2:629425/1‑140 (MQ=255)

                                                            cgcCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCgtg                                                                        <  1:1243335/140‑1 (MQ=255)

                                                            cgcCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCgtg                                                                        >  2:1011968/1‑140 (MQ=255)

                                                            cgcCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCg                                                                          <  1:1154252/138‑1 (MQ=255)

                                                            cgcCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCg                                                                          >  2:1154252/1‑138 (MQ=255)

                                                             gcCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTACCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCgtgg                                                                       >  1:387760/1‑140 (MQ=255)

                                                               cccAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGTCCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCgtggtg                                                                     <  1:859694/140‑1 (MQ=255)

                                                               cccAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCgtggtg                                                                     <  1:586648/140‑1 (MQ=255)

                                                               cccAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCgtggtg                                                                     >  2:579019/1‑140 (MQ=255)

                                                                 cAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCgtggtg                                                                     <  1:1142517/138‑1 (MQ=255)

                                                                 cAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCa                                                                   >  1:266822/1‑140 (MQ=255)

                                                                 cAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCa                                                                   >  2:1101818/1‑140 (MQ=255)

                                                                 cAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCa                                                                   >  2:218712/1‑140 (MQ=255)

                                                                    tCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCg                                                                <  1:985904/140‑1 (MQ=255)

                                                                    tCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCg                                                                <  2:219807/140‑1 (MQ=255)

                                                                        ttCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAAc                                                            <  1:414865/140‑1 (MQ=255)

                                                                        ttCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAAc                                                            <  1:579019/140‑1 (MQ=255)

                                                                         tCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACg                                                           <  1:340255/140‑1 (MQ=255)

                                                                                  aGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTg                                                  >  1:370224/1‑140 (MQ=255)

                                                                                       aGCAGTGCGTTCCCTGCCGATGATGTCCTGACCATTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTggg                                             >  1:573763/1‑140 (MQ=255)

                                                                                       aGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTggg                                             >  2:1160964/1‑140 (MQ=255)

                                                                                       aGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTggg                                             >  1:320559/1‑140 (MQ=255)

                                                                                       aGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTggg                                             >  1:572444/1‑140 (MQ=255)

                                                                                       aGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTggg                                             >  1:693752/1‑140 (MQ=255)

                                                                                        gCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCTCGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGt                                            <  2:161449/140‑1 (MQ=255)

                                                                                           gTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAg                                         >  1:41888/1‑140 (MQ=255)

                                                                                            tGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGCTATTGCTGGGTAAGa                                        >  2:855355/1‑140 (MQ=255)

                                                                                              cGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATc                                      >  2:410829/1‑140 (MQ=255)

                                                                                              cGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATc                                      >  1:843486/1‑140 (MQ=255)

                                                                                                ttCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCaa                                    >  2:827190/1‑140 (MQ=255)

                                                                                                ttCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCaa                                    >  1:200972/1‑140 (MQ=255)

                                                                                                  cccTGCCGATGATGTCCTGACGAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCaaaa                                  >  2:897128/1‑140 (MQ=255)

                                                                                                  cccTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCaaaa                                  >  1:1058880/1‑140 (MQ=255)

                                                                                                      gCCGATGATGTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACt                              >  2:859257/1‑140 (MQ=255)

                                                                                                          atgatgTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCa                          >  2:230450/1‑140 (MQ=255)

                                                                                                          atgatgTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCa                          <  1:624088/140‑1 (MQ=255)

                                                                                                           tgatgTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAg                         >  2:889698/1‑140 (MQ=255)

                                                                                                           tgatgTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAg                         >  2:50961/1‑140 (MQ=255)

                                                                                                            gatgTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAgg                        <  1:180359/140‑1 (MQ=255)

                                                                                                            gatgTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAgg                        <  2:747009/140‑1 (MQ=255)

                                                                                                            gatgTCCTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAgg                        <  2:41888/140‑1 (MQ=255)

                                                                                                                 ccTGACCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCt                   <  2:1246192/140‑1 (MQ=255)

                                                                                                                    gACCAGTTTCTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCCCCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAgg                        <  2:1127123/132‑1 (MQ=255)

                                                                                                                     aCCAGTTTTTTCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAgg               >  2:1173518/1‑140 (MQ=255)

                                                                                                                          ttttttCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAGGAAAGt          >  1:1115243/1‑140 (MQ=255)

                                                                                                                              ttCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAGGAAAGTTGaa      <  1:629425/140‑1 (MQ=255)

                                                                                                                              ttCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAGGAAAGTTGaa      <  1:1101818/140‑1 (MQ=255)

                                                                                                                               tCAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAGGAAAGTTGAAc     >  2:678962/1‑140 (MQ=255)

                                                                                                                                cAGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAGGAAAGTTGAAcc    <  2:266822/140‑1 (MQ=255)

                                                                                                                                 aGTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAGGAAAGTTGAACCa   <  2:33024/140‑1 (MQ=255)

                                                                                                                                  gTCCGAACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAGGAAAGTTGAACCAg  >  2:167886/1‑140 (MQ=255)

CGAAAGTTAATACCACGTTCGCACAGCTCCTCCAACAGCACGACAAGATGCCACATACTGCGCCCCAGTCGGTTCAGTTTACAGACTAGCAGTGCGTTCCCTGCCGATGATGTCCTGACCAGTTTTTTCAGTCCGGACCTCCTGCCACGGTTTTACGTTGAAGTGGTAACCCTGAGCACGCAGTTCTTCAGTCAGGCGTGGTGCACCGTAACGCTGTTATTGCTGGGTAAGATCAAAAAACTTTCAGGCAGCTAAGGAAAGTTGAACCAG  >  NC_000913/2783153‑2783422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`