Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,735,163 C→T A62V (GCC→GTC)  xylR → DNA‑binding transcriptional dual regulator XylR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,735,1630CT100.0% 361.6 / NA 102A62V (GCC→GTC) xylRDNA‑binding transcriptional dual regulator XylR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (51/51);  total (51/51)

Only 100 of 103 total aligned reads displayed.

CCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTT  >  NC_000913/3735028‑3735299
                                                                                                                                       |                                                                                                                                        
ccTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGAc                                                                                                                                      >  2:499564/1‑140 (MQ=255)
   aTGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTc                                                                                                                                   >  1:798847/1‑140 (MQ=255)
    tGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTcg                                                                                                                                  >  1:324146/1‑140 (MQ=255)
    tGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTcg                                                                                                                                  >  1:1215239/1‑140 (MQ=255)
      aCCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTcgac                                                                                                                                <  1:255143/140‑1 (MQ=255)
      aCCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTcgac                                                                                                                                <  1:119525/140‑1 (MQ=255)
          gCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTcgac                                                                                                                                <  1:207575/136‑1 (MQ=255)
          gCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTcgac                                                                                                                                >  2:207575/1‑136 (MQ=255)
          gCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACa                                                                                                                            <  1:91062/140‑1 (MQ=255)
          gCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACa                                                                                                                            <  2:1229700/140‑1 (MQ=255)
          gCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACa                                                                                                                            >  2:742538/1‑140 (MQ=255)
           cAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACaa                                                                                                                           >  2:334039/1‑140 (MQ=255)
            aGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACaaa                                                                                                                          <  1:334039/140‑1 (MQ=255)
            aGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACaaa                                                                                                                          <  1:698746/140‑1 (MQ=255)
            aGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACaaa                                                                                                                          <  2:1179259/140‑1 (MQ=255)
              gtagtaGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACa                                                                                                                        >  2:330343/1‑140 (MQ=255)
                     aaGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAg                                                                                                                 >  2:723946/1‑140 (MQ=255)
                        gCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACaaa                                                                                                                          >  1:1059525/1‑128 (MQ=255)
                        gCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACaaa                                                                                                                          <  2:1059525/128‑1 (MQ=255)
                        gCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCaa                                                                                                              >  2:127970/1‑140 (MQ=255)
                        gCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCaa                                                                                                              >  1:1005931/1‑140 (MQ=255)
                         cGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAg                                                                                                             >  2:1038513/1‑140 (MQ=255)
                         cGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAg                                                                                                             >  2:1051133/1‑140 (MQ=255)
                         cGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAg                                                                                                             >  2:503815/1‑140 (MQ=255)
                            aGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAgcgc                                                                                                          >  2:702549/1‑140 (MQ=255)
                            aGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAgcgc                                                                                                          >  2:686097/1‑140 (MQ=255)
                                  atatTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCgctggctg                                                                                                    <  1:1181526/140‑1 (MQ=255)
                                   tatTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCgctggctg                                                                                                    <  2:1097349/139‑1 (MQ=255)
                                   tatTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCgctggctg                                                                                                    >  1:1097349/1‑139 (MQ=255)
                                        aCAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCg                                                                                              >  2:780751/1‑140 (MQ=255)
                                        aCAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCg                                                                                              >  2:31581/1‑140 (MQ=255)
                                        aCAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCg                                                                                              <  1:966047/140‑1 (MQ=255)
                                         cAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGa                                                                                             <  2:58603/140‑1 (MQ=255)
                                          aGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGAc                                                                                            <  1:41938/140‑1 (MQ=255)
                                            gCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGt                                                                                          <  1:96695/140‑1 (MQ=255)
                                             cGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTc                                                                                         >  1:525307/1‑140 (MQ=255)
                                             cGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTc                                                                                         >  1:1185774/1‑140 (MQ=255)
                                             cGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTc                                                                                         >  1:1018562/1‑140 (MQ=255)
                                              gTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTcc                                                                                        >  1:931191/1‑140 (MQ=255)
                                               tCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATg                                                                                                 >  2:495280/1‑130 (MQ=255)
                                               tCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATg                                                                                                 <  1:495280/130‑1 (MQ=255)
                                               tCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTccc                                                                                       <  1:127970/140‑1 (MQ=255)
                                               tCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTccc                                                                                       <  1:780751/140‑1 (MQ=255)
                                               tCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTccc                                                                                       >  1:436131/1‑140 (MQ=255)
                                               tCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTccc                                                                                       >  2:732363/1‑140 (MQ=255)
                                                cacaATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTcccc                                                                                      <  1:84354/140‑1 (MQ=255)
                                                 acaATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCa                                                                                     <  2:1185774/140‑1 (MQ=255)
                                                      cGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTccc                                                                                       <  2:704595/133‑1 (MQ=255)
                                                      cGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTccc                                                                                       >  1:704595/1‑133 (MQ=255)
                                                      cGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCAttgtt                                                                                >  1:832766/1‑140 (MQ=255)
                                                          aTGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTgggg                                                                            >  1:1144964/1‑140 (MQ=255)
                                                            gggATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGtt                                                                          >  2:590510/1‑140 (MQ=255)
                                                             ggATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTccc                                                                                       <  2:289515/126‑1 (MQ=255)
                                                             ggATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTccc                                                                                       >  1:289515/1‑126 (MQ=255)
                                                             ggATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTg                                                                         <  1:1051133/140‑1 (MQ=255)
                                                              gATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTgg                                                                        <  1:590510/140‑1 (MQ=255)
                                                                 atTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTggcgg                                                                     <  1:1250063/140‑1 (MQ=255)
                                                                  ttttCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTggcggc                                                                    <  1:551616/140‑1 (MQ=255)
                                                                   tttCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCt                                                                   >  1:1236117/1‑140 (MQ=255)
                                                                            agaagaTTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCAcc                                                          >  1:309396/1‑140 (MQ=255)
                                                                             gaagaTTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTggcggc                                                                    <  2:881874/129‑1 (MQ=255)
                                                                             gaagaTTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTggcggc                                                                    >  1:881874/1‑129 (MQ=255)
                                                                                gaTTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGc                                                      >  2:788208/1‑140 (MQ=255)
                                                                                gaTTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGc                                                      >  1:171225/1‑140 (MQ=255)
                                                                                   ttCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCa                                                     >  1:159820/1‑138 (MQ=255)
                                                                                           ccGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTacc                                           >  1:327855/1‑140 (MQ=255)
                                                                                           ccGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTacc                                           >  2:843856/1‑140 (MQ=255)
                                                                                           ccGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTacc                                           <  1:965890/140‑1 (MQ=255)
                                                                                            cGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTaccc                                          <  1:569802/140‑1 (MQ=255)
                                                                                              cATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGc                                                      >  1:282516/1‑126 (MQ=255)
                                                                                              cATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGc                                                      <  2:282516/126‑1 (MQ=255)
                                                                                              cATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTacccac                                        <  2:525307/140‑1 (MQ=255)
                                                                                              cATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTacccac                                        <  2:327855/140‑1 (MQ=255)
                                                                                              cATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTacccac                                        <  2:1005931/140‑1 (MQ=255)
                                                                                                   aTAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGtt                                   >  2:207421/1‑140 (MQ=255)
                                                                                                      aaaTCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCAt                                <  2:1215239/140‑1 (MQ=255)
                                                                                                      aaaTCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCAt                                <  1:788208/140‑1 (MQ=255)
                                                                                                       aaTCAAGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCAtt                               >  1:897600/1‑140 (MQ=255)
                                                                                                           aaGGACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAACTTACCCACCCGTTCATTACAt                           <  2:897600/140‑1 (MQ=255)
                                                                                                             ggACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTg                         <  2:832766/140‑1 (MQ=255)
                                                                                                             ggACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTg                         <  1:330343/140‑1 (MQ=255)
                                                                                                              gACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGc                        <  1:207421/140‑1 (MQ=255)
                                                                                                              gACTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGc                        <  2:18977/140‑1 (MQ=255)
                                                                                                               aCTGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGcc                       <  2:1236117/140‑1 (MQ=255)
                                                                                                                 tGGTTAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGacac                     <  1:1018745/140‑1 (MQ=255)
                                                                                                                    ttAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGa                  <  2:79127/140‑1 (MQ=255)
                                                                                                                    ttAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGa                  <  2:705242/140‑1 (MQ=255)
                                                                                                                    ttAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGa                  <  1:450852/140‑1 (MQ=255)
                                                                                                                    ttAGGAGATGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGa                  <  1:686097/140‑1 (MQ=255)
                                                                                                                           aTGGCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCAACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTAt           >  2:69398/1‑140 (MQ=255)
                                                                                                                             ggCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATgc         >  2:349275/1‑140 (MQ=255)
                                                                                                                             ggCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATgc         >  1:747346/1‑140 (MQ=255)
                                                                                                                             ggCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATgc         >  1:703547/1‑140 (MQ=255)
                                                                                                                             ggCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATgc         >  2:1123218/1‑140 (MQ=255)
                                                                                                                             ggCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATgc         >  1:1140035/1‑140 (MQ=255)
                                                                                                                             ggCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATgc         >  2:1207519/1‑140 (MQ=255)
                                                                                                                             ggCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATgc         >  2:370105/1‑140 (MQ=255)
                                                                                                                             ggCGTCAATGTCGACTTCAACGACAAACAGTTCGAGAAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGCATCACCTTGCAGAAAGTTACCCACCCGTTGATTACATTGCCACCGCCAACTacgt         >  2:757317/1‑137 (MQ=255)
                                                                                                                              gCGTCATTGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATgcg        <  1:1040260/140‑1 (MQ=255)
                                                                                                                                    ttGTCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGtt  <  1:732363/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                        
CCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTT  >  NC_000913/3735028‑3735299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑