| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,905,198 | T→C | T134A (ACG→GCG) | bglF ← | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,905,198 | 0 | T | C | 98.9% | 321.1 / ‑4.6 | 87 | T134A (ACG→GCG) | bglF | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (46/40); total (46/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.60e-01 | |||||||||||
CCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGTCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGATTACCTTTATCATCAT > NC_000913/3905062‑3905329 | ccaccaATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCa > 2:286728/1‑140 (MQ=255) caccaATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGCCGCCCAc > 1:959343/1‑140 (MQ=255) tCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGaaaa > 1:891639/1‑140 (MQ=255) tCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGaa < 1:816106/138‑1 (MQ=255) tCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGaa > 2:816106/1‑138 (MQ=255) aCCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAGTTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGt > 1:741001/1‑140 (MQ=255) aCCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGt > 1:98718/1‑140 (MQ=255) aCCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGt > 2:131446/1‑140 (MQ=255) aCCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGt > 1:174055/1‑140 (MQ=255) cATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGCTCGGTCGCCCACTGAAAAGTGa < 1:250900/140‑1 (MQ=255) tAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGa < 2:169092/132‑1 (MQ=255) tAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGa > 1:169092/1‑132 (MQ=255) tAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCaga > 2:367107/1‑140 (MQ=255) tAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCaga > 2:435918/1‑140 (MQ=255) aaTGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGc < 2:999550/140‑1 (MQ=255) aaTGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGc > 1:616053/1‑140 (MQ=255) aTGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGcc < 1:702932/140‑1 (MQ=255) aTTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGAGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCa < 2:157651/140‑1 (MQ=255) tACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGTCCACTGAAAAGTGAGCGCCAGAGCCAGCATa < 1:1209384/140‑1 (MQ=255) gAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACTAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCa > 1:294892/1‑140 (MQ=255) aaGCGTTTCCCCGCGGTGTATGCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCaa > 2:897386/1‑140 (MQ=255) cGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGAt < 1:818077/140‑1 (MQ=255) tCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCg > 2:1212384/1‑140 (MQ=255) ccccGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCgg < 2:160192/140‑1 (MQ=255) gcgGTGTATCCCAGGATTATCGGGAAGAACCAAAACTAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTgc < 2:294892/140‑1 (MQ=255) gcgGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTgc < 2:891639/140‑1 (MQ=255) gcgGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTgc < 1:740981/140‑1 (MQ=255) gcgGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTgc < 1:181996/140‑1 (MQ=255) ggTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTgccg < 1:191471/140‑1 (MQ=255) tgtATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTgccgcc > 2:1111958/1‑140 (MQ=255) tgtATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTgccgcc > 1:671275/1‑140 (MQ=255) gtATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCTCTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCa < 2:1176848/140‑1 (MQ=255) gtATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCa < 2:1022935/140‑1 (MQ=255) tCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCa < 1:550037/140‑1 (MQ=255) ccAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCaaa < 2:741001/140‑1 (MQ=255) ggATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCg > 1:509694/1‑140 (MQ=255) gATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTgc < 2:960487/126‑1 (MQ=255) gATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTgc > 1:960487/1‑126 (MQ=255) gATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGa > 1:689105/1‑140 (MQ=255) gATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGa > 2:1062161/1‑140 (MQ=255) gATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGa > 2:293381/1‑140 (MQ=255) aTTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGAt < 2:174055/140‑1 (MQ=255) ttATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATc > 1:1111155/1‑140 (MQ=255) tATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCa < 2:689105/140‑1 (MQ=255) aTCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCag > 1:961757/1‑140 (MQ=255) aTCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCag > 1:1203955/1‑140 (MQ=255) tCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCaga > 1:1114678/1‑140 (MQ=255) tCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCaga > 2:1093027/1‑140 (MQ=255) aaCCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTaaa < 1:1212384/140‑1 (MQ=255) aCCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTaaaa < 1:367107/140‑1 (MQ=255) ccAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTaaaaa > 2:996446/1‑140 (MQ=255) aaCAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATAcc < 2:1171426/140‑1 (MQ=255) aGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGc > 1:1146930/1‑125 (MQ=255) aGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGc < 2:1146930/125‑1 (MQ=255) aGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGaa > 1:294627/1‑140 (MQ=255) aGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGaa > 2:727743/1‑140 (MQ=255) aGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGaa < 1:435918/140‑1 (MQ=255) aGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGaa < 2:1111155/140‑1 (MQ=255) aGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGCCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTGAAAATACCTGaa < 2:959343/140‑1 (MQ=255) gCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAAt < 2:1267425/140‑1 (MQ=255) cATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGGGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATa > 1:719668/1‑140 (MQ=255) tCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAAc > 1:1096008/1‑140 (MQ=255) cTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATa < 1:131446/140‑1 (MQ=255) gcTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGaa < 1:126456/127‑1 (MQ=255) gcTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGaa > 2:126456/1‑127 (MQ=255) tGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAg < 2:509694/140‑1 (MQ=255) tGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAg < 1:1163885/140‑1 (MQ=255) gAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGaa < 1:1248547/124‑1 (MQ=255) gAATAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGaa > 2:1248547/1‑124 (MQ=255) aaTAAAATTAAATAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCg > 2:818680/1‑140 (MQ=255) aaTAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGa > 1:314481/1‑140 (MQ=255) aaTAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGa > 2:486455/1‑140 (MQ=255) aaTAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGa > 1:1032594/1‑140 (MQ=255) aaTAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGa < 2:616053/140‑1 (MQ=255) aaTAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGa > 1:34577/1‑140 (MQ=255) aaTAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGa > 1:383133/1‑140 (MQ=255) aTAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGAt < 2:98718/140‑1 (MQ=255) tAAGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGAtt < 2:671275/140‑1 (MQ=255) aaGTACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGATTa < 2:555170/140‑1 (MQ=255) tACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAg > 2:826408/1‑130 (MQ=255) tACCACTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAg < 1:826408/130‑1 (MQ=255) aCTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGATTACCTTTat < 1:1062161/140‑1 (MQ=255) aCTTTGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGATTACCTTTat < 1:818680/140‑1 (MQ=255) tGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGATTACCTTTatcatc > 2:811471/1‑140 (MQ=255) tGTTCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGATTACCTTTatcatc > 2:382534/1‑140 (MQ=255) ttCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGATTACCTTTATcatcat > 1:1153266/1‑140 (MQ=255) ttCGGTCGCCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGATTACCTTTATcatcat > 1:317126/1‑140 (MQ=255) | CCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAACCAAAACAAGGCATCACTGGCGCTGAATAAAATTAAATAAGTACCACTTTGTTCGGTCGTCCACTGAAAAGTGAGCGCCAGAGCCAGCATACCTTTCAAGATCCCGGTTGCCGCCATCAAACCGATCAGAGGCGTAAAAATACCTGAAATAACATAAACAAAGCGGTTTAGCAGATTACCTTTATCATCAT > NC_000913/3905062‑3905329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |