Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	999,709	(C)6→7	coding (494/2601 nt)	elfC →	putative fimbrial usher protein ElfC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	999,703	1	.	C	100.0%	219.3 / NA	62	V163A (GTC→GCC)	elfC	putative fimbrial usher protein ElfC
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (26/36);  total (26/36)

TTTAAACAACTGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGT‑CCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCGTT  >  NC_000913/999564‑999836                                                                                                                                             |                                                                                                                                      tttAAACAACTGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGCGGTTATGt                                                                                                                                        >  1:894011/1‑140 (MQ=255)  ttAAACAACTGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGT‑c                                                                                                                                      >  1:281902/1‑140 (MQ=255)  ttAAACAACTGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGT‑c                                                                                                                                      <  2:771336/140‑1 (MQ=255)           tGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTTCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGT‑ccccccctga                                                                                                                             <  2:641071/140‑5 (MQ=255)           tGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGT‑ccccccctga                                                                                                                             <  2:281902/140‑5 (MQ=255)            ggACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCGGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGT‑ccccccctgaa                                                                                                                            >  2:616305/1‑135 (MQ=255)              acaaacaaGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACg                                                                                                                           <  2:2211/140‑1 (MQ=255)               caaacaaGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGt                                                                                                                          <  2:733013/140‑1 (MQ=255)                aaacaaGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGtt                                                                                                                         <  1:11071/140‑1 (MQ=255)                     aGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGGTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATTCCCGTGGTTATGTCCCCCCCTGAACGTTGGGAt                                                                                                                    >  2:423663/1‑140 (MQ=255)                      gCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATg                                                                                                                   <  1:703254/140‑1 (MQ=255)                       cGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGa                                                                                                                  >  1:351128/1‑140 (MQ=255)                       cGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGa                                                                                                                  >  1:784720/1‑140 (MQ=255)                              gCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATc                                                                                                           >  2:270290/1‑140 (MQ=255)                                cATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCaa                                                                                                         >  2:676662/1‑140 (MQ=255)                                cATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCaa                                                                                                         <  2:784720/140‑1 (MQ=255)                                  ttGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAAcg                                                                                                       <  2:372497/140‑1 (MQ=255)                                   tGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAAcgc                                                                                                      >  2:78299/1‑140 (MQ=255)                                    ggCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATc                                                                                                           >  2:726848/1‑134 (MQ=255)                                    ggCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATc                                                                                                           <  1:726848/134‑1 (MQ=255)                                    ggCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAAcgcg                                                                                                     <  1:682479/140‑1 (MQ=255)                                     gCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACgcgc                                                                                                    <  2:725696/140‑1 (MQ=255)                                     gCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACgcgc                                                                                                    <  1:616305/140‑1 (MQ=255)                                     gCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACgcgc                                                                                                    >  1:235074/1‑140 (MQ=255)                                      cGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCt                                                                                                   <  1:310193/140‑1 (MQ=255)                                           attattCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTAc                                                                                              <  2:662900/140‑1 (MQ=255)                                           attattCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTAc                                                                                              <  2:289687/140‑1 (MQ=255)                                            ttattCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATCAAGGGATCAACGCGCTATTACt                                                                                             <  1:756769/140‑1 (MQ=255)                                               ttCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTggg                                                                                          >  2:315063/1‑140 (MQ=255)                                                        ccAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGtt                                                                                 <  1:497639/140‑1 (MQ=255)                                                         cAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGttt                                                                                >  1:485134/1‑140 (MQ=255)                                                              tAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCgg                                                                           >  2:401797/1‑140 (MQ=255)                                                                 cGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGc                                                                        >  1:691823/1‑140 (MQ=255)                                                                 cGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGc                                                                        <  1:676662/140‑1 (MQ=255)                                                                 cGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGc                                                                        <  1:915203/140‑1 (MQ=255)                                                                   tttAATGTGAACAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTa                                                                      <  1:218074/140‑1 (MQ=255)                                                                    ttAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTaa                                                                     <  1:270290/140‑1 (MQ=255)                                                                      aaTGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACa                                                                   <  2:143534/140‑1 (MQ=255)                                                                      aaTGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACa                                                                   >  2:445338/1‑140 (MQ=255)                                                                      aaTGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACa                                                                   <  2:485134/140‑1 (MQ=255)                                                                       aTGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAg                                                                  >  2:312957/1‑140 (MQ=255)                                                                            aaTAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGc                                                                        >  2:737868/1‑129 (MQ=255)                                                                            aaTAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGc                                                                        <  1:737868/129‑1 (MQ=255)                                                                            aaTAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTc                                                             >  2:740601/1‑140 (MQ=255)                                                                                    ccGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCa                                                            >  2:865256/1‑133 (MQ=255)                                                                                    ccGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCa                                                            <  1:865256/133‑1 (MQ=255)                                                                                    ccGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGAGGGGCTAACAGTATTCATagcagc                                                     <  2:296625/140‑1 (MQ=255)                                                                                    ccGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGAGGGGCTAACAGTATTCATagcagc                                                     <  2:399607/140‑1 (MQ=255)                                                                                     cGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAgcg                                                    <  1:401797/140‑1 (MQ=255)                                                                                      gTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACg                                                                                                                           >  1:956880/1‑68 (MQ=255)                                                                                      gTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACg                                                                                                                           <  2:956880/68‑1 (MQ=255)                                                                                      gTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTAtt                                                              <  2:38207/129‑1 (MQ=255)                                                                                      gTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTAtt                                                              >  1:38207/1‑129 (MQ=255)                                                                                      gTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAgcgc                                                   >  2:967542/1‑140 (MQ=255)                                                                                                     tACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTgg                                    >  2:855502/1‑140 (MQ=255)                                                                                                        cGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGa                                 <  2:351128/140‑1 (MQ=255)                                                                                                          cAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACa                               >  2:915065/1‑140 (MQ=255)                                                                                                                  cATCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTAtttt                       >  1:799003/1‑140 (MQ=255)                                                                                                                   aTCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTc                      <  1:740601/140‑1 (MQ=255)                                                                                                                   aTCAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGCATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTc                      <  2:691823/140‑1 (MQ=255)                                                                                                                     cAAAAGTAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTg                    <  2:235074/140‑1 (MQ=255)                                                                                                                           tAATGCCCGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTa              <  1:78299/140‑1 (MQ=255)                                                                                                                                cccGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTc                      >  2:881479/1‑127 (MQ=255)                                                                                                                                cccGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTc                      <  1:881479/127‑1 (MQ=255)                                                                                                                                cccGTGGTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAg         >  2:514036/1‑140 (MQ=255)                                                                                                                                     ggTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCg    >  2:782643/1‑140 (MQ=255)                                                                                                                                      gTTATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTCGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCGt   <  2:894011/140‑1 (MQ=255)                                                                                                                                       ttATGTCCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCGtt  <  1:105215/140‑1 (MQ=255)                                                                                                                                             |                                                                                                                                      TTTAAACAACTGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGT‑CCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCGTT  >  NC_000913/999564‑999836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑