Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,344,674	T→C	intergenic (‑65/+83)	yciZ ← / ← pdeR	UPF0509 protein YciZ/cyclic di‑GMP phosphodiesterase PdeR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,344,674	0	T	C	100.0%	310.6 / NA	87	intergenic (‑65/+83)	yciZ/pdeR	UPF0509 protein YciZ/cyclic di‑GMP phosphodiesterase PdeR
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/49);  total (38/49)

CGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGTGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGATAGCGTTTATACCAGCGTTCGAAGGCGACGG  >  NC_000913/1344540‑1344803                                                                                                                                       |                                                                                                                                  cGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTa                                                                                                                              <  2:762658/140‑1 (MQ=255)  gCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTaa                                                                                                                             >  2:400850/1‑140 (MQ=255)  gCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTaa                                                                                                                             >  2:719860/1‑140 (MQ=255)    cTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACa                                                                                                                           >  1:772274/1‑140 (MQ=255)    cTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACa                                                                                                                           >  2:918816/1‑140 (MQ=255)    cTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACa                                                                                                                           >  2:118787/1‑140 (MQ=255)    cTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACa                                                                                                                           >  2:162564/1‑140 (MQ=255)      gCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGc                                                                                                                         >  1:699747/1‑140 (MQ=255)       ccACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCa                                                                                                                        <  2:795344/140‑1 (MQ=255)       ccACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCa                                                                                                                        >  1:593213/1‑140 (MQ=255)        cacaAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCaa                                                                                                                       <  1:580531/140‑1 (MQ=255)             ggATATCTAACACAATATCAATACGCTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCt                                                                                                                  <  2:949845/140‑1 (MQ=255)                 atCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAAtt                                                                                                              >  2:754617/1‑140 (MQ=255)                  tCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCaa                                                                                                                       >  1:938386/1‑130 (MQ=255)                  tCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCaa                                                                                                                       <  2:938386/130‑1 (MQ=255)                  tCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTa                                                                                                             >  1:740015/1‑140 (MQ=255)                  tCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTa                                                                                                             <  2:699747/140‑1 (MQ=255)                   cTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTat                                                                                                            <  2:740015/140‑1 (MQ=255)                     aaCACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTatca                                                                                                          >  1:702463/1‑140 (MQ=255)                        acaATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATcc                                                                                                       <  2:421869/140‑1 (MQ=255)                        acaATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATcc                                                                                                       >  2:700192/1‑140 (MQ=255)                           atatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAgg                                                                                                    >  2:527152/1‑140 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGTAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACgg                                                                                                                    <  2:304806/123‑1 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGTAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACgg                                                                                                                    >  1:304806/1‑123 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCGAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGa                                                                                                   >  2:313842/1‑140 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTATTTATCATCCAGGa                                                                                                   >  2:222813/1‑140 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGa                                                                                                   <  2:238461/140‑1 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGa                                                                                                   <  2:926981/140‑1 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGa                                                                                                   >  1:571687/1‑140 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGa                                                                                                   <  1:400850/140‑1 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGa                                                                                                   >  1:464422/1‑140 (MQ=255)                            tatCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAACGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGa                                                                                                   >  2:598232/1‑140 (MQ=255)                               cAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATa                                                                                                <  2:464422/140‑1 (MQ=255)                               cAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATa                                                                                                <  1:883139/140‑1 (MQ=255)                               cAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATa                                                                                                <  1:700192/140‑1 (MQ=255)                                aaTACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATAc                                                                                               <  1:719860/140‑1 (MQ=255)                                 aTACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACg                                                                                              <  2:571687/140‑1 (MQ=255)                                 aTACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACg                                                                                              <  1:377835/140‑1 (MQ=255)                                      ttCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATa                                                                                                <  1:37599/133‑1 (MQ=255)                                      ttCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATa                                                                                                >  2:37599/1‑133 (MQ=255)                                      ttCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGatata                                                                                         >  2:413611/1‑140 (MQ=255)                                      ttCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGatata                                                                                         >  2:789399/1‑140 (MQ=255)                                       tCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGatatat                                                                                        >  1:989589/1‑140 (MQ=255)                                       tCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGatatat                                                                                        >  2:979917/1‑140 (MQ=255)                                       tCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGatatat                                                                                        >  1:625814/1‑140 (MQ=255)                                       tCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGatatat                                                                                        <  2:593213/140‑1 (MQ=255)                                        cGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATa                                                                                                <  1:274321/131‑1 (MQ=255)                                        cGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATa                                                                                                >  2:274321/1‑131 (MQ=255)                                           cAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATg                                                                                    <  2:989589/140‑1 (MQ=255)                                              cgcgCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACg                                                                                 <  2:772274/140‑1 (MQ=255)                                              cgcgCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACg                                                                                 <  1:754617/140‑1 (MQ=255)                                                cgcTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACggg                                                                               >  2:68182/1‑140 (MQ=255)                                                   tGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTATTTATCATCCAGGAATACGATATATAATGACGGGata                                                                            <  1:222813/140‑1 (MQ=255)                                                   tGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGata                                                                            <  2:956321/140‑1 (MQ=255)                                                   tGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGata                                                                            <  2:589333/140‑1 (MQ=255)                                                    gggCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGatat                                                                           <  2:702463/140‑1 (MQ=255)                                                        aTCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAgcg                                                                       <  1:118787/140‑1 (MQ=255)                                                         tCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAgcgc                                                                      <  1:789399/140‑1 (MQ=255)                                                         tCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAgcg                                                                       >  1:497252/1‑139 (MQ=255)                                                         tCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAgcg                                                                       <  2:497252/139‑1 (MQ=255)                                                         tCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATAT‑ATGACGGGATATAGCGCt                                                                     <  2:625814/140‑1 (MQ=255)                                                          cAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAgcact                                                                     <  1:979917/140‑4 (MQ=255)                                                          cAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCt                                                                     <  1:162564/140‑1 (MQ=255)                                                          cAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCt                                                                     <  1:68182/140‑1 (MQ=255)                                                          cAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCt                                                                     <  1:918816/140‑1 (MQ=255)                                                          cAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCt                                                                     <  1:479081/140‑1 (MQ=255)                                                           aaaTTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTa                                                                    <  1:313842/140‑1 (MQ=255)                                                                cAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGtat                                                               <  1:659981/140‑1 (MQ=255)                                                                cAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGtat                                                               <  1:255115/140‑1 (MQ=255)                                                                 aGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAATCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGtata                                                              >  1:899869/1‑140 (MQ=255)                                                                        aaGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTc                                                       <  2:405422/140‑1 (MQ=255)                                                                         aGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAgcg                                                                       <  1:881238/123‑1 (MQ=255)                                                                         aGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAgcg                                                                       >  2:881238/1‑123 (MQ=255)                                                                           gACATCCTTATAGCAAAAGGGGGAAAATGAATAACGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATc                                                    <  1:598232/140‑1 (MQ=255)                                                                               tCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACt                                                >  1:809373/1‑140 (MQ=255)                                                                                 cTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTa                                              >  2:107500/1‑140 (MQ=255)                                                                                        cAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATgcgcgc                                       >  2:584693/1‑140 (MQ=255)                                                                                          aaaGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCtt                                     >  1:577075/1‑140 (MQ=255)                                                                                           aaGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTc                                    <  1:107500/140‑1 (MQ=255)                                                                                                ggAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGAt                                <  1:667295/139‑1 (MQ=255)                                                                                                ggAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGAt                                >  2:667295/1‑139 (MQ=255)                                                                                                ggAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGATa                               <  2:577075/140‑1 (MQ=255)                                                                                                ggAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGATa                               <  2:431908/140‑1 (MQ=255)                                                                                                ggAAAATGAATAATGCAAAAAGTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGATa                               >  2:708951/1‑140 (MQ=255)                                                                                                            atGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGATa                               >  1:236555/1‑128 (MQ=255)                                                                                                            atGCAAAAATTGCCGCTAAAAGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGATa                               <  2:236555/128‑1 (MQ=255)                                                                                                                             aaaaGAGAAGCGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGATAGCGTTTATACCAGCGTTCGAAGGCGAcgg  <  1:584693/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                  CGCCTGCCACAAGGATATCTAACACAATATCAATACGTTCGGCAACGCGCTGGGCATCAAATTCAGACATCAAGGACATCCTTATAGCAAAAGGGGGAAAATGAATAATGCAAAAATTGCCGCTAAAAGAGAAGTGTTTAACAGCAACGGCTAATTATCATCCAGGAATACGATATATAATGACGGGATATAGCGCTAAGTATATATATTCATCTACTTATGCGCGCTTCAGATAGCGTTTATACCAGCGTTCGAAGGCGACGG  >  NC_000913/1344540‑1344803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑