Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,787,472	T→C	pseudogene (1076/2253 nt)	ygaQ →	putative uncharacterized protein YgaQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,787,472	0	T	C	100.0%	284.4 / NA	79	pseudogene (1076/2253 nt)	ygaQ	putative uncharacterized protein YgaQ
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/40);  total (39/40)

GGTAGTGGTAAAAATGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGTAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGA  >  NC_000913/2787345‑2787605                                                                                                                                |                                                                                                                                      ggTAGTGGTAAAAATGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACg                                                                                                                           <  2:710550/140‑1 (MQ=255)    aGTGGTAAAAATGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGaa                                                                                                                             >  2:435923/1‑135 (MQ=255)    aGTGGTAAAAATGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGaa                                                                                                                             <  1:435923/135‑1 (MQ=255)         tAAAAATGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACaaa                                                                                                                   >  1:771667/1‑140 (MQ=255)          aaaaaTGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAat                                                                                                                  <  2:210277/140‑1 (MQ=255)               tGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAatccatc                                                                                                             <  2:771667/140‑1 (MQ=255)                gACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAatccatcc                                                                                                            <  1:236308/140‑1 (MQ=255)                  ccTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCag                                                                                                          <  2:970042/140‑1 (MQ=255)                   cTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCaga                                                                                                         <  1:859438/140‑1 (MQ=255)                     ggATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCagaag                                                                                                       <  2:342463/140‑1 (MQ=255)                     ggATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCagaag                                                                                                       <  2:601404/140‑1 (MQ=255)                       aTTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGat                                                                                                     >  2:405828/1‑140 (MQ=255)                               tctGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACAtct                                                                                             <  2:299005/140‑1 (MQ=255)                                ctgctgATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACAtctc                                                                                            >  2:914409/1‑140 (MQ=255)                                ctgctgATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACAtctc                                                                                            >  2:934864/1‑140 (MQ=255)                                ctgctgATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACAtctc                                                                                            >  1:277004/1‑140 (MQ=255)                                ctgctgATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACAtctc                                                                                            >  2:340957/1‑140 (MQ=255)                                ctgctgATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACAtctc                                                                                            >  2:306772/1‑140 (MQ=255)                                ctgctgATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACAtctc                                                                                            >  1:360221/1‑140 (MQ=255)                                 tgctgATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCa                                                                                           <  1:914409/140‑1 (MQ=255)                                  gctgATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCAc                                                                                          >  1:281786/1‑140 (MQ=255)                                   ctgATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCATAAGATATACATCTCACt                                                                                         >  1:62753/1‑140 (MQ=255)                                             aGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACt                                                                               >  1:786329/1‑140 (MQ=255)                                             aGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACt                                                                               >  1:968770/1‑140 (MQ=255)                                             aGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACt                                                                               >  1:916301/1‑140 (MQ=255)                                                gAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCg                                                                            >  2:976821/1‑140 (MQ=255)                                                gAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCg                                                                            >  1:299669/1‑140 (MQ=255)                                                 aaGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGa                                                                           <  1:934864/140‑1 (MQ=255)                                                  aGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGaa                                                                          <  1:617526/140‑1 (MQ=255)                                                   gATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCATAAGATATACATCTCACTGCAAAAGACTTCGAAg                                                                         <  2:62753/140‑1 (MQ=255)                                                   gATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAACAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAg                                                                         <  2:576936/140‑1 (MQ=255)                                                           aaGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTaaa                                                                 <  1:976821/140‑1 (MQ=255)                                                            aGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAg                                                                >  2:9692/1‑140 (MQ=255)                                                              atatAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAGGACTTCGAAGCAAGTAAAGAt                                                              >  2:769261/1‑140 (MQ=255)                                                              atatAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTc                                                                             >  1:906880/1‑125 (MQ=255)                                                              atatAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTc                                                                             <  2:906880/125‑1 (MQ=255)                                                              atatAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGAt                                                              >  2:402303/1‑140 (MQ=255)                                                              atatAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGAt                                                              >  2:589424/1‑140 (MQ=255)                                                                ataGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATaa                                                            >  2:413349/1‑140 (MQ=255)                                                                 taGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAAc                                                           <  1:77816/140‑1 (MQ=255)                                                                 taGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAAc                                                           <  2:269214/140‑1 (MQ=255)                                                                 taGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAAc                                                           >  2:116239/1‑140 (MQ=255)                                                                 taGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAAc                                                           <  1:306772/140‑1 (MQ=255)                                                                 taGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAAc                                                           <  2:968770/140‑1 (MQ=255)                                                                 taGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAAc                                                           <  1:413349/140‑1 (MQ=255)                                                                    aaGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAg                                                                         >  2:2341/1‑123 (MQ=255)                                                                    aaGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAg                                                                         <  1:2341/123‑1 (MQ=255)                                                                     aGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACAtct                                                       <  2:785886/140‑1 (MQ=255)                                                                       gtggtATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCaa                                                                      >  2:598236/1‑123 (MQ=255)                                                                       gtggtATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCaa                                                                      <  1:598236/123‑1 (MQ=255)                                                                       gtggtATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTa                                                                   <  2:354208/126‑1 (MQ=255)                                                                       gtggtATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTa                                                                   >  1:354208/1‑126 (MQ=255)                                                                        tggtATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTa                                                    >  1:879040/1‑140 (MQ=255)                                                                        tggtATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTa                                                    >  1:813108/1‑140 (MQ=255)                                                                           tATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAgg                                                 <  2:299669/140‑1 (MQ=255)                                                                           tATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAgg                                                 <  1:237549/140‑1 (MQ=255)                                                                                  ggCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAAc                                                           >  2:853836/1‑123 (MQ=255)                                                                                  ggCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAAc                                                           <  1:853836/123‑1 (MQ=255)                                                                                       ttAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGaaa                                     >  2:510193/1‑140 (MQ=255)                                                                                        tAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGaa                                      >  1:912904/1‑138 (MQ=255)                                                                                        tAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGaa                                      <  2:912904/138‑1 (MQ=255)                                                                                         aGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAAc                                   >  1:821057/1‑140 (MQ=255)                                                                                             aGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTcc                               <  1:769261/140‑1 (MQ=255)                                                                                             aGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTcc                               >  2:697657/1‑140 (MQ=255)                                                                                             aGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTcc                               <  1:589424/140‑1 (MQ=255)                                                                                              ggTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCa                              >  1:897254/1‑140 (MQ=255)                                                                                               gTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCAt                             <  1:93566/140‑1 (MQ=255)                                                                                               gTCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCAt                             >  2:447502/1‑140 (MQ=255)                                                                                                tCAGGTTTTGATTCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATg                            >  1:799573/1‑140 (MQ=255)                                                                                                            tCCATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTaaaagaaa                <  2:897254/140‑1 (MQ=255)                                                                                                             ccATTCATTAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTaaaagaaaa               <  2:786329/140‑1 (MQ=255)                                                                                                              cattcattAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTaaaagaaaag              >  2:474307/1‑140 (MQ=255)                                                                                                                ttcattAAAGATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCg            >  1:880259/1‑140 (MQ=255)                                                                                                                         gATCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATgg   <  1:697657/140‑1 (MQ=255)                                                                                                                          aTCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATACCATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGa  >  2:878449/1‑140 (MQ=255)                                                                                                                          aTCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGa  <  2:86205/140‑1 (MQ=255)                                                                                                                          aTCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGa  <  2:879040/140‑1 (MQ=255)                                                                                                                          aTCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGa  <  1:447502/140‑1 (MQ=255)                                                                                                                          aTCCAGCAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGa  <  1:768420/140‑1 (MQ=255)                                                                                                                                |                                                                                                                                      GGTAGTGGTAAAAATGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGTAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGA  >  NC_000913/2787345‑2787605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑