Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,676,481 G→A G115G (GGC→GGT yphD ← putative ABC transporter membrane subunit YphD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,676,4810GA98.5% 201.8 / ‑4.3 65G115G (GGC→GGTyphDputative ABC transporter membrane subunit YphD
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base A (33/31);  total (34/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.67e-01

CATCAATCGGCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCGCCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGGAGATAATAATCAGCGTCA  >  NC_000913/2676345‑2676617
                                                                                                                                        |                                                                                                                                        
catcaATCGGCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCt                                                                                                                                       <  2:168803/140‑1 (MQ=255)
  tcaATCGGCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTaa                                                                                                                                     >  2:321019/1‑140 (MQ=255)
   caATCGGCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAAc                                                                                                                                    >  1:738070/1‑140 (MQ=255)
     aTCGGCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAg                                                                                                                                  >  2:493184/1‑140 (MQ=255)
     aTCGGCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAg                                                                                                                                  <  1:200764/140‑1 (MQ=255)
     aTCGGCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAg                                                                                                                                  <  1:479268/140‑1 (MQ=255)
         gCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAac                                                                                                                              <  2:369739/140‑1 (MQ=255)
         gCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAac                                                                                                                              >  1:719518/1‑140 (MQ=255)
                   tGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGc                                                                                                                    >  1:306722/1‑140 (MQ=255)
                    gCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCa                                                                                                                   >  1:614222/1‑140 (MQ=255)
                    gCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCa                                                                                                                   >  1:117312/1‑140 (MQ=255)
                     cGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCAc                                                                                                                  <  1:321019/140‑1 (MQ=255)
                         cGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCa                                                                                                              >  2:834214/1‑140 (MQ=255)
                                aaCAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAg                                                                                                       <  2:719518/140‑1 (MQ=255)
                                  cAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCg                                                                                                     <  1:408141/140‑1 (MQ=255)
                                     ccccATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGaa                                                                                                  >  2:650397/1‑140 (MQ=255)
                                      cccATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAAc                                                                                                 >  1:315396/1‑140 (MQ=255)
                                             cgcgCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAAt                                                                                          <  2:306722/140‑1 (MQ=255)
                                               cgcAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTg                                                                                        >  1:696903/1‑140 (MQ=255)
                                               cgcAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTg                                                                                        >  1:13444/1‑140 (MQ=255)
                                               cgcAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTg                                                                                        >  1:559571/1‑140 (MQ=255)
                                                 cAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTgca                                                                                      <  1:958567/140‑1 (MQ=255)
                                                     gcgcTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCaa                                                                                  <  2:738070/140‑1 (MQ=255)
                                                              aGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAg                                                                         >  2:503082/1‑140 (MQ=255)
                                                              aGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAg                                                                         >  1:427670/1‑140 (MQ=255)
                                                                     gtgtGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACAcc                                                                  >  1:738555/1‑140 (MQ=255)
                                                                      tgtgGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCACACCTAACAGCAACACCAGCAGGCACGCCACCTCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCg                                                                 >  2:916772/1‑140 (MQ=255)
                                                                       gtgGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCga                                                                <  1:650397/140‑1 (MQ=255)
                                                                          gCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGAc                                                             >  1:960217/1‑140 (MQ=255)
                                                                          gCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGAc                                                             >  1:472910/1‑140 (MQ=255)
                                                                          gCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGAc                                                             >  2:187647/1‑140 (MQ=255)
                                                                          gCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGAc                                                             >  1:642088/1‑140 (MQ=255)
                                                                          gCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGAc                                                             >  2:741140/1‑140 (MQ=255)
                                                                           cAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACa                                                            >  1:97295/1‑140 (MQ=255)
                                                                           cAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACa                                                            <  2:172660/140‑1 (MQ=255)
                                                                                aaaCTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGc                                                       <  1:494777/140‑1 (MQ=255)
                                                                                    ttGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGccacc                                                   <  1:809121/140‑1 (MQ=255)
                                                                                      ggTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCAt                                                 <  1:365136/140‑1 (MQ=255)
                                                                                                ccacGCCGCGCAGCACCCCGGCCAGCGTTCCCACCAGCGCACCAAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACg                                       <  1:670619/139‑1 (MQ=255)
                                                                                                acacGCCGCGCAGCCCCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACg                                       <  2:315396/140‑1 (MQ=255)
                                                                                                    gccgcGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGa                                   >  2:781158/1‑140 (MQ=255)
                                                                                                    gccgcGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGa                                   >  1:250580/1‑140 (MQ=255)
                                                                                                     ccgcGCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGAc                                  >  1:708445/1‑140 (MQ=255)
                                                                                                      cgcgCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACa                                 >  2:885078/1‑140 (MQ=255)
                                                                                                      cgcgCAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACa                                 >  2:44116/1‑140 (MQ=255)
                                                                                                       gcgcAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACAt                                >  2:624888/1‑140 (MQ=255)
                                                                                                       gcgcAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACAt                                >  2:746346/1‑140 (MQ=255)
                                                                                                        cgcAGCACCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATc                               <  1:741140/140‑1 (MQ=255)
                                                                                                            gcaCCCCGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAAtt                           >  1:569654/1‑140 (MQ=255)
                                                                                                              cccccGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTc                         <  2:302816/139‑1 (MQ=255)
                                                                                                                 ccGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCAcc                      <  1:842246/140‑1 (MQ=255)
                                                                                                                 ccGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCAcc                      <  2:13444/140‑1 (MQ=255)
                                                                                                                  cGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCAcc                      <  2:526707/139‑1 (MQ=255)
                                                                                                                  cGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCAcc                      >  1:526707/1‑139 (MQ=255)
                                                                                                                  cGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCg                     <  1:277189/140‑1 (MQ=255)
                                                                                                                  cGGCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCg                     >  1:308037/1‑140 (MQ=255)
                                                                                                                   ggCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCgg                    <  2:97295/140‑1 (MQ=255)
                                                                                                                   ggCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCgg                    <  1:493184/140‑1 (MQ=255)
                                                                                                                   ggCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCgg                    <  2:738555/140‑1 (MQ=255)
                                                                                                                   ggCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCgg                    <  2:708445/140‑1 (MQ=255)
                                                                                                                   ggCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCgg                    <  1:916772/140‑1 (MQ=255)
                                                                                                                    gCCAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGga                   <  1:233482/140‑1 (MQ=255)
                                                                                                                     ccAGCGTTCCCATCAGCGCGCCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGgag                  >  1:203247/1‑140 (MQ=255)
                                                                                                                      cAGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGgaga                 <  2:559571/140‑1 (MQ=255)
                                                                                                                       aGCGTTCCCATCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGGAGat                <  2:614222/140‑1 (MQ=255)
                                                                                                                                aTCAGCGCACCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGGAGATAATAATCAg       <  1:834214/140‑1 (MQ=255)
                                                                                                                                    gcgcacCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGGAGATAATAATCAGCGTc   <  1:781158/140‑1 (MQ=255)
                                                                                                                                    gcgcacCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGGAGATAATAATCAGCGTc   <  2:427670/140‑1 (MQ=255)
                                                                                                                                     cgcacCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGGAGATAATAATCAGCGTCa  <  2:843310/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                        
CATCAATCGGCACTGGCAGTGCGTTCGTCATAAACAGCCCCATTCCGCGCAGGGCGCTCCACAGCCCCAGTGTGGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCGCCTAACAGCAACACCAGCAGGCACGCCACCGCCAGCGGAACTTCAAATTGCAGCAAAAATGCCAGGCACACCGAGACAAAAGCCACCATCGGCCCAACGCTGACATCAATTTCACCGGAGATAATAATCAGCGTCA  >  NC_000913/2676345‑2676617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: