Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,787,193	G→A	pseudogene (797/2253 nt)	ygaQ →	putative uncharacterized protein YgaQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,787,193	0	G	A	100.0%	236.9 / NA	67	pseudogene (797/2253 nt)	ygaQ	putative uncharacterized protein YgaQ
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (32/35);  total (32/35)

CATGCTTTTAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGATATCATTCCTGATT  >  NC_000913/2787057‑2787318                                                                                                                                         |                                                                                                                              cATGCTTTTAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTa                                                                                                                            <  1:148811/140‑1 (MQ=255)  aTGCTTTTAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTAc                                                                                                                           <  1:603768/140‑1 (MQ=255)  aTGCTTTTAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTAc                                                                                                                           <  1:339199/140‑1 (MQ=255)   tGCTTTTAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACt                                                                                                                          >  2:537025/1‑140 (MQ=255)      ttttAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGt                                                                                                                       >  1:387186/1‑140 (MQ=255)      ttttAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGt                                                                                                                       >  1:297165/1‑140 (MQ=255)       tttAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGtt                                                                                                                      <  1:297345/140‑1 (MQ=255)         tAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTc                                                                                                                    >  2:607979/1‑140 (MQ=255)              ccACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTAc                                                                                                                           <  1:701649/128‑1 (MQ=255)              ccACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTAc                                                                                                                           >  2:701649/1‑128 (MQ=255)                 ccTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTAt                                                                                                            <  1:424806/140‑1 (MQ=255)                         cagATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGa                                                                                                    <  2:292259/140‑1 (MQ=255)                          agATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGaa                                                                                                   <  1:537025/140‑1 (MQ=255)                            aTCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGa                                                                                                 >  1:232196/1‑140 (MQ=255)                            aTCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGa                                                                                                 >  1:72652/1‑140 (MQ=255)                              cAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCTGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATc                                                                                               >  2:798924/1‑140 (MQ=255)                              cAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATc                                                                                               >  2:798923/1‑140 (MQ=255)                               agagAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCt                                                                                              <  1:783607/140‑1 (MQ=255)                                 agaAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCttt                                                                                            <  2:72652/140‑1 (MQ=255)                                 agaAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCttt                                                                                            >  2:365228/1‑140 (MQ=255)                                    aaaTATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTa                                                                                         <  1:207131/140‑1 (MQ=255)                                      atatGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCt                                                                                              <  1:602946/133‑1 (MQ=255)                                      atatGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAcc                                                                                       <  1:365228/140‑1 (MQ=255)                                      atatGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTGCATGCTTATCAACCCGAAGATCt                                                                                              >  2:602946/1‑133 (MQ=255)                                           tCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAccatcca                                                                                  >  2:1573/1‑140 (MQ=255)                                           tCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTAccatcca                                                                                  >  2:736161/1‑140 (MQ=255)                                              gAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATaa                                                                               <  2:387186/140‑1 (MQ=255)                                               aaTTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAAt                                                                              >  2:838402/1‑140 (MQ=255)                                               aaTTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAAt                                                                              >  1:22875/1‑140 (MQ=255)                                                         ttGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGgag                                                                    >  2:141892/1‑140 (MQ=255)                                                                tATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCa                                                             <  1:172607/140‑1 (MQ=255)                                                                 aTGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAg                                                            <  1:263307/140‑1 (MQ=255)                                                                    ggTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGAt                                                         >  2:845682/1‑140 (MQ=255)                                                                    ggTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGAt                                                         >  2:34001/1‑140 (MQ=255)                                                                      tatataCAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGAttt                                                       >  2:214898/1‑140 (MQ=255)                                                                        tataCAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTa                                                     <  2:297165/140‑1 (MQ=255)                                                                             aaaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTGCTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  1:888428/140‑1 (MQ=255)                                                                             aaaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTTCa                                                <  2:651831/140‑1 (MQ=255)                                                                             aaaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  2:232196/140‑1 (MQ=255)                                                                             aaaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  1:267340/140‑1 (MQ=255)                                                                             aaaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  1:307368/140‑1 (MQ=255)                                                                             aaaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  1:549206/140‑1 (MQ=255)                                                                             aaaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  1:607979/140‑1 (MQ=255)                                                                             aaaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  2:388170/140‑1 (MQ=255)                                                                             aaaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  1:736161/140‑1 (MQ=255)                                                                              aaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                >  2:803794/1‑139 (MQ=255)                                                                              aaTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  1:803794/139‑1 (MQ=255)                                                                               aTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCTAATGGGAGATTTGCAGGATTTTATTGCGtt                                              >  2:603502/1‑140 (MQ=255)                                                                               aTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                <  2:20681/138‑1 (MQ=255)                                                                               aTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCa                                                >  1:20681/1‑138 (MQ=255)                                                                               aTCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCAtt                                              >  1:659146/1‑140 (MQ=255)                                                                                  ccTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGt                                           >  2:934822/1‑140 (MQ=255)                                                                                    tCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCTACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTa                                         >  2:258509/1‑140 (MQ=255)                                                                                    tCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGa                                                          <  1:862872/123‑1 (MQ=255)                                                                                    tCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGa                                                          >  2:862872/1‑123 (MQ=255)                                                                                    tCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTa                                         >  2:522069/1‑140 (MQ=255)                                                                                    tCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTa                                         >  2:487761/1‑140 (MQ=255)                                                                                    tCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTa                                         >  2:296569/1‑140 (MQ=255)                                                                                                      cgcCGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTg                       <  2:659146/140‑1 (MQ=255)                                                                                                        ccGACGGACCAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCCAAAAAATTTGGt                     <  1:296569/140‑1 (MQ=255)                                                                                                                ccAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGatat             <  1:798923/140‑1 (MQ=255)                                                                                                                ccAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGatat             <  1:798924/140‑1 (MQ=255)                                                                                                                ccAGAAACTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGatat             <  1:141892/140‑1 (MQ=255)                                                                                                                       cTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGATATCATTCCt      >  1:657675/1‑140 (MQ=255)                                                                                                                       cTCCCGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGATATCATTCCt      >  1:974568/1‑140 (MQ=255)                                                                                                                         cccGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGATATCATGCCTGa    >  2:871436/1‑140 (MQ=255)                                                                                                                           cGAAGAAGAAAAGGATTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGATATCATTCCTGAtt  <  1:845682/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                              CATGCTTTTAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGATATCATTCCTGATT  >  NC_000913/2787057‑2787318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑