Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,348,279	(C)6→7	intergenic (+41/‑173)	npr → / → yrbL	phosphorelay protein Npr/protein kinase‑like domain‑containing protein YrbL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,348,273	1	.	C	100.0%	238.2 / NA	66	intergenic (+35/‑179)	npr/yrbL	phosphorelay protein Npr/protein kinase‑like domain‑containing protein YrbL
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (37/29);  total (37/29)

TGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACT‑CCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGTTTTGTTTAAGTTA  >  NC_000913/3348136‑3348406                                                                                                                                           |                                                                                                                                      tGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACT‑cc                                                                                                                                     >  2:71878/1‑140 (MQ=255)  gCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACT‑ccc                                                                                                                                    <  1:871451/140‑1 (MQ=255)             gCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATa                                                                                                                          >  1:839981/1‑140 (MQ=255)                   tgaagttgaagCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGaaaa                                                                                                                    >  1:518469/1‑140 (MQ=255)                        ttgaagCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACg                                                                                                               <  1:781907/140‑1 (MQ=255)                        ttgaagCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACg                                                                                                               >  2:169917/1‑140 (MQ=255)                                aCCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGaaa                                                                                                       >  1:880753/1‑140 (MQ=255)                                 ccGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAAt                                                                                                      <  2:186565/140‑1 (MQ=255)                                 ccGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAAt                                                                                                      <  2:839981/140‑1 (MQ=255)                                               gaggaagCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAAc                                                                                        >  2:209315/1‑140 (MQ=255)                                               gaggaagCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAAc                                                                                        >  1:332963/1‑140 (MQ=255)                                                aggaagCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACg                                                                                       <  1:131969/140‑1 (MQ=255)                                                 ggaagCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGt                                                                                      <  1:392127/140‑1 (MQ=255)                                                    agCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCAt                                                                                   >  2:471203/1‑140 (MQ=255)                                                    agCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCAt                                                                                   >  2:597949/1‑140 (MQ=255)                                                    agCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCAt                                                                                   <  1:597949/140‑1 (MQ=255)                                                    agCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCAt                                                                                   <  1:523497/140‑1 (MQ=255)                                                     gCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCAtt                                                                                  <  2:880753/140‑1 (MQ=255)                                                      cACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCtcaatc                                                                                           <  2:792964/130‑1 (MQ=255)                                                      cACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCtcaatc                                                                                           >  1:792964/1‑130 (MQ=255)                                                          ggCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTAc                                                                             >  2:184880/1‑140 (MQ=255)                                                          ggCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTAc                                                                             >  1:806584/1‑140 (MQ=255)                                                           gccgccGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACa                                                                            >  1:400897/1‑140 (MQ=255)                                                             cgccgTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACAtt                                                                          >  2:810683/1‑140 (MQ=255)                                                                cgTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTtg                                                                       <  1:810683/140‑1 (MQ=255)                                                                 gTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTtgt                                                                      <  2:806584/140‑1 (MQ=255)                                                                          ctctTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTc                                                             >  1:427398/1‑140 (MQ=255)                                                                            ctTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCAc                                                           >  1:795668/1‑140 (MQ=255)                                                                             tttAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACt                                                          >  2:150203/1‑140 (MQ=255)                                                                               tAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACtt                                                         <  2:677778/139‑1 (MQ=255)                                                                               tAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACtt                                                         >  1:677778/1‑139 (MQ=255)                                                                                 aTTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCa                                                      >  2:691475/1‑140 (MQ=255)                                                                                   tCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCaga                                                    <  2:518469/140‑1 (MQ=255)                                                                                    cTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCagaa                                                   <  2:427398/140‑1 (MQ=255)                                                                                       gTTTTGATGGAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCagaag                                                  <  2:572927/138‑1 (MQ=255)                                                                                       gTTTTGATGGAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCagaag                                                  >  1:572927/1‑138 (MQ=255)                                                                                       gTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCagaag                                                  <  2:744344/138‑1 (MQ=255)                                                                                       gTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCagaag                                                  >  1:744344/1‑138 (MQ=255)                                                                                       gTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAgaagaa                                                >  1:774401/1‑140 (MQ=255)                                                                                        ttttGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAAc                                               <  1:184880/140‑1 (MQ=255)                                                                                          ttGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACt                                                          >  1:76355/1‑127 (MQ=255)                                                                                          ttGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACt                                                          <  2:76355/127‑1 (MQ=255)                                                                                             atgaAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTaa                                          >  2:644673/1‑140 (MQ=255)                                                                                                aaGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGaa                                       <  2:400897/140‑1 (MQ=255)                                                                                                         cTTCATCACTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAag                              <  2:774401/140‑1 (MQ=255)                                                                                                            catcaCTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAgg                           <  1:471203/140‑1 (MQ=255)                                                                                                            catcaCTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAgg                           <  1:209315/140‑1 (MQ=255)                                                                                                            catcaCTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAgg                           >  1:852547/1‑140 (MQ=255)                                                                                                             atcaCTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGc                          <  1:169917/140‑1 (MQ=255)                                                                                                             atcaCTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGc                          >  2:871420/1‑140 (MQ=255)                                                                                                             atcaCTTTGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGc                          >  2:179724/1‑140 (MQ=255)                                                                                                                    tGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGttt                   >  1:667781/1‑140 (MQ=255)                                                                                                                    tGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGttt                   <  2:795668/140‑1 (MQ=255)                                                                                                                    tGACATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGttt                   >  2:284282/1‑140 (MQ=255)                                                                                                                      aCATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCtt                                 <  1:227498/124‑1 (MQ=255)                                                                                                                      aCATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCtt                                 >  2:227498/1‑124 (MQ=255)                                                                                                                      aCATACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAg                 >  2:333746/1‑140 (MQ=255)                                                                                                                         tACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGtt              >  2:760677/1‑140 (MQ=255)                                                                                                                         tACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGtt              <  2:332963/140‑1 (MQ=255)                                                                                                                         tACAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGtt              <  1:691475/140‑1 (MQ=255)                                                                                                                           cAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGc                          <  2:546678/126‑1 (MQ=255)                                                                                                                           cAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGc                          >  1:546678/1‑126 (MQ=255)                                                                                                                           cAACTCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGtttt            >  2:889148/1‑140 (MQ=255)                                                                                                                               tCCCTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGTTTTGttt        >  1:103250/1‑140 (MQ=255)                                                                                                                                  cTTCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGTTTTGTTTAAg     >  2:253090/1‑140 (MQ=255)                                                                                                                                   ttCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGTTTTGTTTAAGt    >  1:330453/1‑140 (MQ=255)                                                                                                                                   ttCAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGTTTTGTTTAAGt    >  1:122688/1‑140 (MQ=255)                                                                                                                                     cAAACTCCCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGTTTTGTTTAAGTTa  <  1:333746/140‑1 (MQ=255)                                                                                                                                           |                                                                                                                                      TGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAATCTTCATCACTTTGACATACAACTCCCTTCAAACT‑CCCCCCGACAATAAGAAAATCACGTACTGAAATCGTTCTCAATCAACGTCATTTGTACATTTTGTGCGCTTTTCACTTTCAGAAGAACCTTAAGAAAACCTTAAGAGGCATTGTTTAGGTTTTGTTTAAGTTA  >  NC_000913/3348136‑3348406

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑