| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 375327 = | NA (NA) | 20 (0.390) | 13/262 | 2.5 | NA | intergenic (+446/‑132) | mhpE/mhpT | 4‑hydroxy‑2‑oxovalerate aldolase/3‑hydroxyphenylpropionate/3‑ hydroxycinnamate:H(+) symporter |
| ? | NC_000913 | 377328 = | NA (NA) | intergenic (+17/+207) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
GTACGAGTCGACATAAGATGAACCTCGTTGCGAGTGCAGGTGAATCGCGACTGATACATTGCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/375472‑375327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcgtgCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAG > NC_000913/377328‑377465 GTACGAGTCGACATAAGATGAACCTCGTTGCGAGTGCAGGTGAATCGCGACTGATACATTGCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCA < 2:296423/140‑1 GTCGACATAAGATGAACCTCGTTGCGAGTGCAGGTGAATCGCGACTGATACATTGCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTG < 2:300465/140‑1 CAGGTGAATCGCGACTGATACATTGCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGT > 2:861118/1‑140 CAGGTGAATCGCGACTGATACATTGCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGT > 1:569256/1‑140 CAGGTGAATCGCGACTGATACATTGCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGT > 1:566280/1‑140 TACATTGCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGct > 1:8473/1‑138 CATTGCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTA < 2:569256/140‑1 GCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGG > 2:157327/1‑140 AGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGA > 1:314064/1‑140 AGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGA > 2:462852/1‑140 ATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGAC < 1:462852/140‑1 ACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTA‑ACGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAA < 1:328297/140‑1 ACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGGCCGGATA > 1:654286/1‑140 CTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCTGATAA < 2:8473/140‑1 CTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGA > 2:729012/1‑137 CTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGA < 1:729012/137‑1 CTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTA‑ACGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAA > 1:721386/1‑139 CTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTA‑ACGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAA < 2:721386/139‑1 CTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAA < 1:157327/140‑1 TATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGGCCGGATAAG < 2:654286/140‑1 ATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCG < 1:861118/140‑1 TTTATCGCATCCGGCAGTCGTGTGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGA < 2:566280/140‑1 AGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTT > 1:440878/1‑140 GTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTA > 2:13519/1‑140 TCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTAT > 1:569883/1‑140 CGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATC > 1:357988/1‑140 CGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGG > 2:566629/1‑57 CGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGG < 1:566629/57‑1 TGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTGGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTG > 2:740671/1‑127 TGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTGGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTG < 1:740671/127‑1 TGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAG > 1:779725/1‑140 GTACGAGTCGACATAAGATGAACCTCGTTGCGAGTGCAGGTGAATCGCGACTGATACATTGCCAGCCGCGTAATCAGAACTATTTAATGACTGCCTACGGGCGAAATGTAGGCCGGACAAGACGTTTATCGCATCCGGCAGTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/375472‑375327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtcgtgCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAG > NC_000913/377328‑377465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |