Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,448,581	T→C	K60R (AAG→AGG)	rpmC ←	50S ribosomal subunit protein L29

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,448,581	0	T	C	100.0%	276.7 / NA	76	K60R (AAG→AGG)	rpmC	50S ribosomal subunit protein L29
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (42/34);  total (42/34)

CGTACGCTTGATGAATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCTTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGT  >  NC_000913/3448446‑3448716                                                                                                                                        |                                                                                                                                        cGTACGCTTGATGAATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCtctc                                                                                                                                     >  2:199004/1‑140 (MQ=255)  gTACGCTTGATGAATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCg                                                                                                                                    <  1:198417/140‑1 (MQ=255)    aCGCTTGATGAATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGtt                                                                                                                                  <  1:773676/140‑1 (MQ=255)     cGCTTGATGAATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTc                                                                                                                                 >  2:79487/1‑140 (MQ=255)     cGCTTGATGAATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGCCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTc                                                                                                                                 >  1:749500/1‑140 (MQ=255)         tgatgaATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGt                                                                                                                                   <  2:868201/134‑1 (MQ=255)         tgatgaATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGt                                                                                                                                   >  1:868201/1‑134 (MQ=255)         tgatgaATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTa                                                                                                                             <  2:422366/140‑1 (MQ=255)         tgatgaATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTa                                                                                                                             <  1:347890/140‑1 (MQ=255)          gatgaATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTaa                                                                                                                            >  2:689027/1‑140 (MQ=255)          gatgaATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTaa                                                                                                                            >  2:159489/1‑140 (MQ=255)                 ttACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTa                                                                                                                     <  2:919930/140‑1 (MQ=255)                   aCCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAAc                                                                                                                   <  2:815976/140‑1 (MQ=255)                          aTCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCg                                                                                                            >  2:357624/1‑140 (MQ=255)                              ggTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACAt                                                                                                        >  2:140026/1‑140 (MQ=255)                              ggTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACAt                                                                                                        >  1:661193/1‑140 (MQ=255)                               gtgtTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATc                                                                                                       >  1:781818/1‑140 (MQ=255)                               gtgtTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATc                                                                                                       >  1:690459/1‑140 (MQ=255)                                 gtTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATcgc                                                                                                     >  2:206547/1‑140 (MQ=255)                                   ttCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGa                                                                                                   >  2:461176/1‑140 (MQ=255)                                       caAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCa                                                                                               <  2:749500/140‑1 (MQ=255)                                        aaaaCGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCAc                                                                                              <  1:518538/140‑1 (MQ=255)                                                cGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCa                                                                                      <  1:474647/140‑1 (MQ=255)                                                 gATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCaa                                                                                     <  1:140026/140‑1 (MQ=255)                                                 gATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCaa                                                                                     >  2:367671/1‑140 (MQ=255)                                                      caacaacaaTGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGt                                                                                <  1:689027/140‑1 (MQ=255)                                                             aaTGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTg                                                                               <  2:484984/134‑1 (MQ=255)                                                             aaTGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTg                                                                               >  1:484984/1‑134 (MQ=255)                                                              aTGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGt                                                                        >  1:175297/1‑140 (MQ=255)                                                                  aTTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCa                                                                    >  2:419531/1‑140 (MQ=255)                                                                    ttCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGc                                                                  <  1:554314/140‑1 (MQ=255)                                                                      ctcCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTg                                                                >  2:463317/1‑140 (MQ=255)                                                                      ctcCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTg                                                                >  2:632703/1‑140 (MQ=255)                                                                      ctcCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTg                                                                >  1:883741/1‑140 (MQ=255)                                                                      ctcCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTg                                                                >  1:366122/1‑140 (MQ=255)                                                                      ctcCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTg                                                                >  1:434921/1‑140 (MQ=255)                                                                       tcCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTgg                                                               >  2:212695/1‑140 (MQ=255)                                                                        ccATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGc                                                              <  1:827348/140‑1 (MQ=255)                                                                        ccATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGc                                                              <  2:844409/140‑1 (MQ=255)                                                                        ccATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGc                                                              <  2:434921/140‑1 (MQ=255)                                                                           ttttGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGc                                                              <  2:179743/137‑1 (MQ=255)                                                                           ttttGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGc                                                              >  1:179743/1‑137 (MQ=255)                                                                               gtagCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGc                                                       <  2:365506/137‑1 (MQ=255)                                                                                tCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGc                                                              >  1:886057/1‑132 (MQ=255)                                                                                tCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGc                                                              <  2:886057/132‑1 (MQ=255)                                                                                tCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCa                                                      >  1:509150/1‑140 (MQ=255)                                                                                tCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCa                                                      >  1:429559/1‑140 (MQ=255)                                                                                 cGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAg                                                     <  1:520787/140‑1 (MQ=255)                                                                                          cgcgACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATAc                                            <  2:265597/140‑1 (MQ=255)                                                                                          cgcgACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATAc                                            >  1:265597/1‑140 (MQ=255)                                                                                          cgcgACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATAc                                            >  1:258688/1‑140 (MQ=255)                                                                                          cgcgACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATAc                                            >  2:91919/1‑140 (MQ=255)                                                                                           gcgACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACg                                           <  2:342357/140‑1 (MQ=255)                                                                                            cgACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGc                                          <  2:258688/140‑1 (MQ=255)                                                                                             gACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCa                                         >  1:351962/1‑140 (MQ=255)                                                                                               ccTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAgg                                       <  2:517421/140‑1 (MQ=255)                                                                                                    cAGAGTACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGaa                                  <  2:175297/140‑1 (MQ=255)                                                                                                         tACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCt                             >  1:721307/1‑140 (MQ=255)                                                                                                         tACGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCt                             >  2:427343/1‑140 (MQ=255)                                                                                                          aCGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTc                            <  2:509150/140‑1 (MQ=255)                                                                                                           cGGATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCa                           <  2:721307/140‑1 (MQ=255)                                                                                                            ggATTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCAc                          <  1:199004/140‑1 (MQ=255)                                                                                                              aTTTTATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACgc                        >  1:75807/1‑140 (MQ=255)                                                                                                                 ttATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACgcagc                     >  1:830804/1‑140 (MQ=255)                                                                                                                  tATCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACgcagca                    <  1:91919/140‑1 (MQ=255)                                                                                                                   aTCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGcagcag                   >  1:648921/1‑140 (MQ=255)                                                                                                                   aTCGGTCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGcagcag                   >  1:237874/1‑140 (MQ=255)                                                                                                                        tCATTACGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTca              >  1:791176/1‑140 (MQ=255)                                                                                                                              cGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCt        <  1:632703/140‑1 (MQ=255)                                                                                                                              cGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCt        >  1:725927/1‑140 (MQ=255)                                                                                                                              cGCACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCt        <  1:463317/140‑1 (MQ=255)                                                                                                                                cACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCg      <  1:357624/140‑1 (MQ=255)                                                                                                                                cACCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCg      <  1:206547/140‑1 (MQ=255)                                                                                                                                 aCCCGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCgg     >  1:312350/1‑140 (MQ=255)                                                                                                                                  cccGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGgt    >  1:721191/1‑140 (MQ=255)                                                                                                                                    cGCCCTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGgtgt  >  2:667258/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                        CGTACGCTTGATGAATTTACCGTAGATCGGGTGTTTCACAAAACGTTCGATAGCAACAACAATGGATTTCTCCATTTTGTCGCTAACAACGCGACCTTGCAGAGTACGGATTTTATCGGTCATTACGCACCCGCCTTCTCGTTCAGTAAAGTCTTAACGCGTGCGACATCGCGACGCACTTGCTTCAACAGGTGAGACTGTTGCAGCTGGCCACTTGCAGCCTGCATACGCAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGT  >  NC_000913/3448446‑3448716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑