| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,561,864 | (C)6→7 | coding (812/1179 nt) | yjiJ ← | putative transporter YjiJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,561,858 | 1 | . | C | 98.9% | 336.7 / ‑3.5 | 94 | coding (818/1179 nt) | yjiJ | putative transporter YjiJ |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (48/45); total (49/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGAGATGTCGTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAG‑‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCATGAGCGGCAGGTAAGTCGCGACG > NC_000913/4561725‑4561992 | cAGAGATGTCGTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAG‑‑cccccc > 1:895583/1‑140 (MQ=255) agaTGTCGTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAG‑‑cccccccaa > 1:610135/1‑137 (MQ=255) agaTGTCGTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAG‑‑cccccccaa > 2:1129784/1‑137 (MQ=255) ggTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGtttt < 2:1135570/139‑1 (MQ=255) gTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTtg < 1:1153666/140‑1 (MQ=255) gTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTtg > 1:993530/1‑140 (MQ=255) gTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTtg < 1:291138/140‑1 (MQ=255) gTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTtg < 2:592736/140‑1 (MQ=255) gTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTtg < 2:187458/140‑1 (MQ=255) cATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGcc < 1:733795/140‑1 (MQ=255) aaaGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCAt > 2:1208090/1‑140 (MQ=255) aCCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccag > 2:393117/1‑140 (MQ=255) aCCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccag > 1:61149/1‑140 (MQ=255) aCCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccag > 2:393327/1‑140 (MQ=255) ccGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccagc > 1:979632/1‑140 (MQ=255) ccGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccagc > 1:129757/1‑140 (MQ=255) ccGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccagc > 1:1224064/1‑140 (MQ=255) cGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccagcc > 1:847933/1‑140 (MQ=255) cGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccagcc > 1:128305/1‑140 (MQ=255) cGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccagcc > 2:937723/1‑140 (MQ=255) ccAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACTCAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCaa > 2:211785/1‑140 (MQ=255) ccAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCaa > 2:133809/1‑140 (MQ=255) aaaCCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccag < 2:741739/133‑1 (MQ=255) aaaCCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATagccag > 1:741739/1‑133 (MQ=255) aaCCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCa > 2:256659/1‑140 (MQ=255) gACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCATACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAgg < 1:829079/140‑1 (MQ=255) gACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAgg < 1:1071828/140‑1 (MQ=255) gACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAgg < 2:915293/140‑1 (MQ=255) gACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAgg < 2:1050390/140‑1 (MQ=255) gACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAgg > 2:355806/1‑140 (MQ=255) gACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAgg < 1:1361310/140‑1 (MQ=255) gACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAgg < 2:129757/140‑1 (MQ=255) ctgctgATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGTTGCCCATAGCCAGCCAAAGCAACCAGGca < 1:845135/140‑1 (MQ=255) ctgctgATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGca < 1:133809/140‑1 (MQ=255) ctgctgATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGAAAGCAGCACACAACTAGCCTGCAAAAGCAAATTCGCCGTCAGCCAGGGCAAAGC‑CCCCCC‑AACGTTATGCTGCCCATAGCCAGCCAAAGCAACCAGGca < 2:1600369/140‑1 (MQ=255) gctgATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGcaca < 1:1551033/140‑1 (MQ=255) ctgATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGCCCCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGcaca > 2:1228288/1‑140 (MQ=255) ctgATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACaa > 2:840081/1‑140 (MQ=255) gatAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGAt < 1:496304/140‑1 (MQ=255) atAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATa > 2:423777/1‑140 (MQ=255) atAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATa > 1:506613/1‑140 (MQ=255) gCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAgtc > 1:1438274/1‑138 (MQ=255) gCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGcc < 2:847933/140‑1 (MQ=255) gCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGcc > 2:1553599/1‑140 (MQ=255) gCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGcc < 2:128305/140‑1 (MQ=255) gCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGcc > 1:659408/1‑140 (MQ=255) agagGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGTCGACTa < 2:1438274/140‑1 (MQ=255) agagGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTa > 2:398476/1‑140 (MQ=255) agagGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTa < 2:952993/140‑1 (MQ=255) agagGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTa < 1:423777/140‑1 (MQ=255) agagGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTa < 1:398476/140‑1 (MQ=255) agagGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTa < 1:1336082/140‑1 (MQ=255) agagGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTa < 1:355806/140‑1 (MQ=255) agagGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTa < 2:672085/140‑1 (MQ=255) agagGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTa < 2:610135/140‑1 (MQ=255) ggCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAG‑‑CCCCCCGAACGTTTTGGTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACg > 2:1435723/1‑140 (MQ=255) gCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGt > 2:967491/1‑140 (MQ=255) gCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGt > 1:766408/1‑140 (MQ=255) aGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCa > 1:254879/1‑140 (MQ=255) aGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCa > 1:1456564/1‑140 (MQ=255) tCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCaga > 2:492709/1‑140 (MQ=255) tCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCaga > 2:346774/1‑140 (MQ=255) cTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGAt < 1:346774/140‑1 (MQ=255) ggCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATgg > 1:142589/1‑140 (MQ=255) gCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATggg < 2:1456564/140‑1 (MQ=255) gagaGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCg < 2:659408/140‑1 (MQ=255) gagaGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCg < 2:142589/140‑1 (MQ=255) gagTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGt < 2:61149/140‑1 (MQ=255) gagTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGt < 2:993530/140‑1 (MQ=255) tAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATggg > 2:1426193/1‑133 (MQ=255) tAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATggg < 1:1426193/133‑1 (MQ=255) agcagcACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGCCCCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAAc < 1:1228288/140‑1 (MQ=255) gcagcaCACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACaa > 2:269126/1‑140 (MQ=255) cacacaGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGt < 1:937723/140‑1 (MQ=255) cacacaGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGt > 1:498401/1‑140 (MQ=255) cacacaGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGt < 1:1194584/140‑1 (MQ=255) cacaGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGa > 2:1206371/1‑140 (MQ=255) aGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGcc > 2:49181/1‑140 (MQ=255) aTAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTg < 2:766408/140‑1 (MQ=255) tAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGc < 1:211785/140‑1 (MQ=255) gCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCAt > 1:1294445/1‑140 (MQ=255) tGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCtt > 1:250018/1‑140 (MQ=255) cACCGGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTc > 1:1270723/1‑140 (MQ=255) cACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATgg > 2:1052525/1‑124 (MQ=255) cACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATgg < 1:1052525/124‑1 (MQ=255) cACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTc > 2:52427/1‑140 (MQ=255) cACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTc > 1:1402627/1‑140 (MQ=255) cACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTc > 1:1519149/1‑140 (MQ=255) cACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTc > 1:576152/1‑140 (MQ=255) cACCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTc > 2:1027406/1‑140 (MQ=255) aCCAGCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCg < 1:1208090/140‑1 (MQ=255) gCAAATTCGCCGTCAGGCAGGGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCAt > 2:209569/1‑140 (MQ=255) gcaggGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCATGAGCgg < 2:102397/130‑1 (MQ=255) gcaggGCAAAGC‑CCCCCC‑AACGCTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCATGAGCgg > 1:102397/1‑130 (MQ=255) caggGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCATGAGCGGCAGGTAAGTcg < 1:393117/140‑1 (MQ=255) caggGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCATGAGCGGCAGGTAAGTcg < 1:393327/140‑1 (MQ=255) aggGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCATGAGCGGCAGGTAAGTcgc < 1:269126/140‑1 (MQ=255) aggGCAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCATGAGCGGCAGGTAAGTcgc < 2:1519149/140‑1 (MQ=255) cAAAGC‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCATGAGCGGCAGGTAAGTCGcgacg > 2:1130921/1‑140 (MQ=255) | CAGAGATGTCGTGCCCATAAAGGTACCGCCAAAACCAAGACTGCTGATGATAAGCAAGAGAGGCGAGTCGCTGGCGAGAGTAAGCAGCACACAGATAGCCTGCACCAGCAAATTCGCCGTCAGGCAGGGCAAAG‑‑CCCCCC‑AACGTTTTGCTGCCCATAGCCAGCCAAAGCAACCAGGCACAATTGATAAGCCGACTAACGTCCAGAGATGGGCGGTTAACAATGGTGAGCCTGCATCTTTCGCCATGAGCGGCAGGTAAGTCGCGACG > NC_000913/4561725‑4561992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |