Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,116,501	A→G	L28L (TTA→CTA)	lpxL ←	lauroyl acyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,116,501	0	A	G	100.0%	318.2 / NA	90	L28L (TTA→CTA)	lpxL	lauroyl acyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (41/49);  total (41/49)

GTTCGCTCATTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAACCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCAATTGTATGTATTGTCGCATTTTT  >  NC_000913/1116366‑1116635                                                                                                                                        |                                                                                                                                       gTTCGCTCATTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCaa                                                                                                                                    <  1:118966/140‑1 (MQ=255) gTTCGCTCATTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCaa                                                                                                                                    >  2:1407142/1‑140 (MQ=255)     gCTCATTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTa                                                                                                                                <  1:687496/140‑1 (MQ=255)     gCTCATTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTa                                                                                                                                <  1:304054/140‑1 (MQ=255)      cTCATTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTAc                                                                                                                               >  1:375719/1‑140 (MQ=255)      cTCATTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTAc                                                                                                                               >  1:33794/1‑140 (MQ=255)       tCATTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACg                                                                                                                              >  1:614339/1‑140 (MQ=255)         aTTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGcc                                                                                                                            <  1:1094126/140‑1 (MQ=255)         aTTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGcc                                                                                                                            <  2:184803/140‑1 (MQ=255)         aTTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGcc                                                                                                                            <  1:1420337/140‑1 (MQ=255)             ccGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATa                                                                                                                        <  1:1419770/140‑1 (MQ=255)                ggAAGCACAGTTCCAGGTTGCGATGCACAATTTTAGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCCGCTAGGGCAATTGCGCGACTAGCCAAAGTACGCCAGTAccc                                                                                                                     >  2:1420337/1‑140 (MQ=255)                  aaGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCaa                                                                                                                   <  2:1368308/140‑1 (MQ=255)                     cacaGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCa                                                                                                                >  1:1239562/1‑140 (MQ=255)                     cacaGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCa                                                                                                                >  2:356292/1‑140 (MQ=255)                     cacaGTTCCAGGTTGCGATGCACAATTTCTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCa                                                                                                                >  2:402602/1‑140 (MQ=255)                       caGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAgg                                                                                                              >  2:820136/1‑140 (MQ=255)                         gTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGtt                                                                                                            <  1:1483689/140‑1 (MQ=255)                          ttCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTa                                                                                                           <  1:452215/140‑1 (MQ=255)                             ccggTTTCCATGCACAATTTTTTCGCGTCGGTTCATAAAACGTAACGGCAGTTTTCCCAAACCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAAcc                                                                                                        <  1:482934/138‑1 (MQ=255)                             cAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAAcc                                                                                                        <  1:574784/140‑1 (MQ=255)                               ggTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCaa                                                                                                      >  2:1158123/1‑140 (MQ=255)                                   gCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAAc                                                                                                  <  1:165398/140‑1 (MQ=255)                                    cGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCaa                                                                                                                   <  1:1594535/122‑1 (MQ=255)                                    cGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCaa                                                                                                                   >  2:1594535/1‑122 (MQ=255)                                    cGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAgg                                                                                                              >  2:430280/1‑127 (MQ=255)                                    cGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAgg                                                                                                              >  2:1580923/1‑127 (MQ=255)                                    cGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAgg                                                                                                              <  1:1580923/127‑1 (MQ=255)                                    cGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAgg                                                                                                              <  1:430280/127‑1 (MQ=255)                                    cGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAAcg                                                                                                 >  2:283138/1‑140 (MQ=255)                                    cGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAAcg                                                                                                 >  1:451305/1‑140 (MQ=255)                                         cacaATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGAt                                                                                            >  2:479466/1‑140 (MQ=255)                                          acaATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATg                                                                                           <  1:927787/140‑1 (MQ=255)                                          acaATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATg                                                                                           >  1:233952/1‑140 (MQ=255)                                            aaTTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGaa                                                                                         >  2:1409114/1‑140 (MQ=255)                                              tttttGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGc                                                                                       >  1:845626/1‑140 (MQ=255)                                               ttttGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCa                                                                                      <  2:845626/140‑1 (MQ=255)                                               ttttGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCa                                                                                      <  2:1182830/140‑1 (MQ=255)                                                   gcgcGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGc                                                                                  >  2:890961/1‑140 (MQ=255)                                                   gcgcGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGc                                                                                  >  1:199840/1‑140 (MQ=255)                                                              cATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACt                                                                       <  2:1239562/140‑1 (MQ=255)                                                                   aaCGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGt                                                                  >  2:1449595/1‑140 (MQ=255)                                                                   aaCGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGt                                                                  >  1:976227/1‑140 (MQ=255)                                                                      gTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGa                                                               <  2:976227/140‑1 (MQ=255)                                                                      gTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGa                                                               <  1:402602/140‑1 (MQ=255)                                                                      gTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGa                                                               <  2:376570/140‑1 (MQ=255)                                                                      gTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGa                                                               <  1:1449595/140‑1 (MQ=255)                                                                        aaCGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGAtt                                                             <  1:820136/140‑1 (MQ=255)                                                                           gCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGt                                                          <  1:677063/140‑1 (MQ=255)                                                                             cAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCa                                                        <  1:1407142/140‑1 (MQ=255)                                                                               gTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCata                                                      >  2:112871/1‑140 (MQ=255)                                                                                 tttCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATc                                                    >  1:578495/1‑140 (MQ=255)                                                                                    ccTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAAt                                                 >  2:1551521/1‑140 (MQ=255)                                                                                            acaACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGtttt                                         <  2:233952/140‑1 (MQ=255)                                                                                             caACCGAGGCGGTAGATAACCGGGTAGGGCAATCGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGttttt                                        >  2:878993/1‑140 (MQ=255)                                                                                              aaCCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTc                                       >  2:541574/1‑140 (MQ=255)                                                                                                ccGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCaa                                     <  1:890961/140‑1 (MQ=255)                                                                                                   aGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCa                                      <  2:1040110/136‑1 (MQ=255)                                                                                                   aGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCa                                      >  1:1040110/1‑136 (MQ=255)                                                                                                   aGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCt                                  >  1:1181006/1‑140 (MQ=255)                                                                                                   aGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCt                                  >  2:378403/1‑140 (MQ=255)                                                                                                    ggCGGTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTa                                 >  1:1278037/1‑140 (MQ=255)                                                                                                        gTAGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCg                             <  2:614339/140‑1 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           <  2:1181006/140‑1 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           <  1:112871/140‑1 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           <  1:1409114/140‑1 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           <  2:451305/140‑1 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           <  2:413652/140‑1 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           <  1:356292/140‑1 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           <  1:318031/140‑1 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCgg                            <  2:181743/139‑1 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCgg                            >  1:181743/1‑139 (MQ=255)                                                                                                          aGATAACCGGGTAGGGCAATCGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           <  1:878993/140‑1 (MQ=255)                                                                                                           gATAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGc                          <  2:33794/140‑1 (MQ=255)                                                                                                            aTAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCa                         <  1:283138/140‑1 (MQ=255)                                                                                                            aTAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCa                         <  1:378403/140‑1 (MQ=255)                                                                                                            aTAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCa                         <  1:1158123/140‑1 (MQ=255)                                                                                                             tAACCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCaa                        <  2:375719/140‑1 (MQ=255)                                                                                                              aaCCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCAAt                       >  2:1023401/1‑140 (MQ=255)                                                                                                              aaCCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCAAt                       <  2:290201/140‑1 (MQ=255)                                                                                                               aCCGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCAAtt                      >  1:1600387/1‑140 (MQ=255)                                                                                                                ccGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           <  1:794237/134‑1 (MQ=255)                                                                                                                ccGGGTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCggg                           >  2:794237/1‑134 (MQ=255)                                                                                                                   ggTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCa                         >  2:1031734/1‑133 (MQ=255)                                                                                                                   ggTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCa                         <  1:1031734/133‑1 (MQ=255)                                                                                                                   ggTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCa                         >  2:311947/1‑133 (MQ=255)                                                                                                                   ggTAGGGCAATTGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCa                         <  1:311947/133‑1 (MQ=255)                                                                                                                             ttGCACGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCAATTGTATGTATTGTCGc        >  2:461882/1‑140 (MQ=255)                                                                                                                                  cGACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCAATTGTATGTATTGTCGCAtttt   >  2:676023/1‑140 (MQ=255)                                                                                                                                   gACTAGCCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCAATTGTATGTATTGTCGCAttttt  >  1:275599/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                       GTTCGCTCATTTCCGGGAAGCACAGTTCCAGGTTGCGATGCACAATTTTTGCGCGTCGTTTCATAAAACGTAACGCCAGTTTTCCTAATCCACAACCGAGGCGGTAGATAACCGGGTAGGGCAATTGCACGACTAACCAAAGTACGCCAATACCCAACCAGGTTAACCAATAACGCGGATGAAGCAGTGCGGTGGAGAACTTGGGTAGATTCGTCATATCAATCCTGTTTTTCAACCTATTCGGGCAATTGTATGTATTGTCGCATTTTT  >  NC_000913/1116366‑1116635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑