Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,042,956 | A→G | F65L (TTC→CTC) | yqfA ← | hemolysin‑III family protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,042,956 | 0 | A | G | 98.9% | 329.5 / NA | 93 | F65L (TTC→CTC) | yqfA | hemolysin‑III family protein |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (47/45); minor base C (0/1); total (47/46) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GGAGAATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGTGACTGACGCT > NC_000913/3042820‑3043091 | ggAGAATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGcag < 1:696489/140‑1 (MQ=255) gagaATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGagcagc < 1:151558/140‑1 (MQ=255) tCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGAt > 1:250113/1‑140 (MQ=255) tCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGAt > 2:152569/1‑140 (MQ=255) cAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCa > 2:450015/1‑140 (MQ=255) gCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATa > 2:1232205/1‑140 (MQ=255) ccccACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATAc > 1:1490679/1‑140 (MQ=255) ccccACCAACAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAgcagca < 2:1302499/131‑1 (MQ=255) ccccACCAACAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAgcagca > 1:1302499/1‑131 (MQ=255) ccaccaGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTg < 1:175145/140‑1 (MQ=255) ccaGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTgccg > 2:1559392/1‑140 (MQ=255) ccaGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTgccg < 1:1166822/140‑1 (MQ=255) aaaaaCGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATa < 2:159843/140‑1 (MQ=255) aaaaaCGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATa < 2:1241889/140‑1 (MQ=255) aCGGCGTTGAGGTTCCGGCAATCAACAGGTAAATTGCGGAATGGTAAAATTTCTTCAGCCACATTTTGGCCCGTTGATGGGGAATGGCGTCATAGAGCGAGGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAgg < 2:1187221/140‑1 (MQ=255) ggCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCt > 2:1081990/1‑140 (MQ=255) cGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGt > 1:1358109/1‑140 (MQ=255) gtgtAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTCCCGCCATAGAGGCTGTa > 1:125716/1‑140 (MQ=255) tgtAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAg < 1:883050/140‑1 (MQ=255) tgtAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAg < 1:102776/140‑1 (MQ=255) tgtAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAg < 1:140747/140‑1 (MQ=255) tgtAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAg < 2:915476/140‑1 (MQ=255) tgtAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGACCAGCAGGATCATACTGCCGCCATAGAGGCTGTAg < 2:1422866/140‑1 (MQ=255) tAGGTCCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCt < 2:1159198/140‑1 (MQ=255) gTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGt < 2:250113/140‑1 (MQ=255) gTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGt < 1:430323/140‑1 (MQ=255) ccGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTAt < 2:787296/140‑1 (MQ=255) ccGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTAt > 2:723029/1‑140 (MQ=255) ggCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCg > 1:1583646/1‑140 (MQ=255) ggCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCg > 1:1388703/1‑140 (MQ=255) cAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCt < 1:723029/140‑1 (MQ=255) cAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTgg < 1:960330/140‑1 (MQ=255) cAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTgg < 1:220107/140‑1 (MQ=255) cAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGgcgc < 1:528325/140‑1 (MQ=255) cAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGgcgc < 1:247325/140‑1 (MQ=255) cAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTCCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGgcgc < 2:125716/140‑1 (MQ=255) aGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCt < 1:152569/140‑1 (MQ=255) gTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTgg < 2:1583646/140‑1 (MQ=255) aTAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCAtt < 1:993469/140‑1 (MQ=255) gcgcAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGgcgc < 2:751802/130‑1 (MQ=255) gcgcAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGgcgc > 1:751802/1‑130 (MQ=255) cgcAATTGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGa > 1:280851/1‑140 (MQ=255) cgcAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGa > 1:753598/1‑140 (MQ=255) cAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGTCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATc > 1:851733/1‑140 (MQ=255) cAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATc > 1:126266/1‑140 (MQ=255) cAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATc > 2:1244789/1‑140 (MQ=255) cAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATc > 2:303982/1‑140 (MQ=255) aTGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCa < 1:1234106/140‑1 (MQ=255) aTGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCa < 2:1187325/140‑1 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCAc > 1:1208626/1‑140 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCAc > 2:575681/1‑140 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCAc > 2:769013/1‑140 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCAc > 1:670319/1‑140 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCAc > 1:589769/1‑140 (MQ=255) gTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTaa < 1:846147/131‑1 (MQ=255) gTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTaa > 2:846147/1‑131 (MQ=255) gTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCg > 2:847173/1‑140 (MQ=255) gTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCg > 1:370668/1‑140 (MQ=255) gTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCg > 2:857298/1‑140 (MQ=255) gTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCg < 1:598598/140‑1 (MQ=255) aaaTTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCt > 1:1288725/1‑140 (MQ=255) aaaTTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCACCt > 2:1039858/1‑140 (MQ=255) aaTTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGTTCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTg < 2:589769/140‑1 (MQ=255) ttcttcAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCACCTGAAc < 1:1039858/140‑1 (MQ=255) cttcAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCa < 2:753598/140‑1 (MQ=255) cttcAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCa < 2:1358109/140‑1 (MQ=255) ttcAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAg > 1:298358/1‑140 (MQ=255) aGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAg < 2:657580/140‑1 (MQ=255) aGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAg < 1:1496435/140‑1 (MQ=255) gCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGc < 1:847173/140‑1 (MQ=255) aTTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGcc > 2:1005300/1‑123 (MQ=255) aTTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGcc < 1:1005300/123‑1 (MQ=255) tttGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAg < 2:370668/140‑1 (MQ=255) gCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGccc > 1:403410/1‑140 (MQ=255) ccGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCaa < 2:1288725/140‑1 (MQ=255) aTGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGATGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAacac > 2:991720/1‑140 (MQ=255) tGGCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACAcc > 1:681547/1‑140 (MQ=255) gCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCaa > 2:1057952/1‑140 (MQ=255) gCGTGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCaa > 1:1274421/1‑140 (MQ=255) tGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAacac > 2:1193894/1‑134 (MQ=255) tGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAacac < 1:1117531/134‑1 (MQ=255) tGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAacac < 1:1193894/134‑1 (MQ=255) tGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAAccc > 1:74755/1‑140 (MQ=255) tGATAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTAGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAacac > 2:1117531/1‑134 (MQ=255) aTAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAacac > 1:443865/1‑132 (MQ=255) aTAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAacac < 2:443865/132‑1 (MQ=255) aTAGAGCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCaa > 1:771207/1‑140 (MQ=255) agCGTCGAAGCGAGGAGCAGCAGGATCATACTGTCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGcc < 2:851733/140‑1 (MQ=255) agCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATGGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGcc > 1:486236/1‑140 (MQ=255) agCGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGcc < 2:403410/140‑1 (MQ=255) cGTCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGt > 1:841922/1‑140 (MQ=255) tCGAAGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGtga > 1:1205360/1‑140 (MQ=255) aaGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGtgtctg > 1:1576351/1‑140 (MQ=255) aGCGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGtgactga < 1:207146/140‑1 (MQ=255) cGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGTGACTGACg < 2:126266/140‑1 (MQ=255) cGAGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGGTATCGCCGTTGCGCTGGCATTAAGATCCACCGCCTCAACCAGTAACTACACCAGCCCAAGGAAACGAAACCGCAAGCCAATGCCGAGACCGACg > 2:1148821/1‑140 (MQ=255) aGGAGCAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGTGACTGACGCt < 2:670319/140‑1 (MQ=255) | GGAGAATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAACAGCAGGATCATACTGCCGCCATAGAGGCTGTAGCTGGTTATCGCTGTGGCGCTGGCATTAAGATCCACCGCCTGAACCAGTAGCAACACCAGCCCAACGATACCAAACACCAACCCAATGCCGTGACTGACGCT > NC_000913/3042820‑3043091 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |