BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,522,907	T→C	C13R (TGT→CGT)	mrcA →	peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,522,907	0	T	C	100.0%	440.8 / NA	122	C13R (TGT→CGT)	mrcA	peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (65/57); total (65/57)

Only 100 of 122 total aligned reads displayed.

CCCGTCACTCTGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCTGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAGCTGA  >  NC_000913/3522771‑3523042

cccGTCACTCTGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGtt                                                                                                                                      >  2:877413/1‑140 (MQ=255)

   gTCACTCTGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCa                                                                                                                                   >  1:270554/1‑140 (MQ=255)

   gTCACTCTGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCa                                                                                                                                   >  1:1325877/1‑140 (MQ=255)

    tCACTCTGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCAt                                                                                                                                  <  1:548103/140‑1 (MQ=255)

    tCACTCTGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCAt                                                                                                                                  >  1:1427442/1‑140 (MQ=255)

     cACTCTGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCAtt                                                                                                                                 <  1:877413/140‑1 (MQ=255)

     cACTCTGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCAtt                                                                                                                                 >  2:732344/1‑140 (MQ=255)

          tGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTctgct                                                                                                                            <  1:1006204/140‑1 (MQ=255)

          tGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTctgct                                                                                                                            <  2:645037/140‑1 (MQ=255)

          tGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTctgct                                                                                                                            <  1:1559401/140‑1 (MQ=255)

                gTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGc                                                                                                                      <  1:567665/140‑1 (MQ=255)

                 tataTCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCa                                                                                                                     <  2:240775/140‑1 (MQ=255)

                    atCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGc                                                                                                                  >  1:1210892/1‑140 (MQ=255)

                      cAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTc                                                                                                                <  1:999599/140‑1 (MQ=255)

                      cAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTc                                                                                                                >  1:473907/1‑140 (MQ=255)

                         tGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAt                                                                                                             >  1:320059/1‑140 (MQ=255)

                          gCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAtt                                                                                                            >  1:1412285/1‑140 (MQ=255)

                          gCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAtt                                                                                                            >  2:247966/1‑140 (MQ=255)

                          gCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAtt                                                                                                            >  2:84809/1‑140 (MQ=255)

                          gCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAtt                                                                                                            >  1:396116/1‑140 (MQ=255)

                          gCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAtt                                                                                                            >  1:1579905/1‑140 (MQ=255)

                           cGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAttt                                                                                                           >  1:1318803/1‑140 (MQ=255)

                           cGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAttt                                                                                                           <  2:1579905/140‑1 (MQ=255)

                           cGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAttt                                                                                                           >  1:829818/1‑140 (MQ=255)

                           cGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAttt                                                                                                           <  2:539415/140‑1 (MQ=255)

                           cGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAttt                                                                                                           <  1:165470/140‑1 (MQ=255)

                           cGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGAttt                                                                                                           >  2:722049/1‑140 (MQ=255)

                           cGTCTGGCTTGCC‑TTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTa                                                                                                          >  2:47676/1‑140 (MQ=255)

                            gTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTa                                                                                                          <  2:161022/140‑1 (MQ=255)

                            gTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTa                                                                                                          <  1:837015/140‑1 (MQ=255)

                            gTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTa                                                                                                          <  2:1412285/140‑1 (MQ=255)

                             tCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTAt                                                                                                         >  2:165061/1‑140 (MQ=255)

                             tCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTAt                                                                                                         >  1:347432/1‑140 (MQ=255)

                              cTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATg                                                                                                        >  1:652241/1‑140 (MQ=255)

                                   ttGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCta                                                                                                   <  1:632041/140‑1 (MQ=255)

                                   ttGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCta                                                                                                   <  2:232868/140‑1 (MQ=255)

                                   ttGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCta                                                                                                   <  2:652241/140‑1 (MQ=255)

                                           ataCTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCta                                                                                                   >  1:476653/1‑132 (MQ=255)

                                           ataCTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCta                                                                                                   <  2:476653/132‑1 (MQ=255)

                                              ctacCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACAt                                                                                        <  1:247966/140‑1 (MQ=255)

                                              ctacCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACAt                                                                                        <  2:347432/140‑1 (MQ=255)

                                                acCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCg                                                                                      >  2:1546259/1‑140 (MQ=255)

                                                acCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCg                                                                                      <  2:1280963/140‑1 (MQ=255)

                                                 ccGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCta                                                                                                   >  2:1093877/1‑126 (MQ=255)

                                                 ccGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGa                                                                                     >  2:899539/1‑140 (MQ=255)

                                                 ccGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGa                                                                                     >  1:366923/1‑140 (MQ=255)

                                                 ccGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGa                                                                                     >  1:728468/1‑140 (MQ=255)

                                                  cgcgcgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACACCGAg                                                                                    >  1:1003068/1‑140 (MQ=255)

                                                    cgcgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCta                                                                                                   <  2:278318/123‑1 (MQ=255)

                                                    cgcgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCta                                                                                                   >  1:278318/1‑123 (MQ=255)

                                                    cgcgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGcc                                                                                  >  1:1231571/1‑140 (MQ=255)

                                                    cgcgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGcc                                                                                  >  1:74887/1‑140 (MQ=255)

                                                    cgcgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGcc                                                                                  >  2:1388679/1‑140 (MQ=255)

                                                     gcgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCca                                                                                 <  1:771734/140‑1 (MQ=255)

                                                     gcgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCca                                                                                 <  2:1318803/140‑1 (MQ=255)

                                                      cgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGTAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCcac                                                                                >  2:314075/1‑140 (MQ=255)

                                                      cgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCcac                                                                                >  1:290148/1‑140 (MQ=255)

                                                      cgTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCcac                                                                                >  1:422552/1‑140 (MQ=255)

                                                                   aCTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCcaca                                                                               <  1:734977/128‑1 (MQ=255)

                                                                     tGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTgg                                                                 <  2:366923/140‑1 (MQ=255)

                                                                     tGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTgg                                                                 >  2:631599/1‑140 (MQ=255)

                                                                     tGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTgg                                                                 <  2:398046/140‑1 (MQ=255)

                                                                      gCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGc                                                                >  2:1281087/1‑140 (MQ=255)

                                                                      gCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGc                                                                <  2:1201738/140‑1 (MQ=255)

                                                                      gCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGc                                                                >  2:620232/1‑140 (MQ=255)

                                                                      gCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGc                                                                >  2:1033366/1‑140 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTGCATCGAGCCACAACTGCCGGATGTGGCg                                                               <  1:314075/140‑1 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGc                                                                >  1:1027963/1‑139 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGc                                                                <  2:1027963/139‑1 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCg                                                               >  2:1006766/1‑140 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCg                                                               <  2:290148/140‑1 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCg                                                               <  2:825217/140‑1 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCg                                                               <  2:1423843/140‑1 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCg                                                               <  2:1210892/140‑1 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCg                                                               <  1:165061/140‑1 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCg                                                               >  1:197515/1‑140 (MQ=255)

                                                                       cccAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCg                                                               >  1:825217/1‑140 (MQ=255)

                                                                         cAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGAc                                                             <  2:197515/140‑1 (MQ=255)

                                                                               aaaCTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTaaa                                                       <  2:405959/140‑1 (MQ=255)

                                                                               aaaCTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTaaa                                                       <  1:620232/140‑1 (MQ=255)

                                                                                 aCTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACa                                                            >  2:802862/1‑133 (MQ=255)

                                                                                 aCTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACa                                                            <  1:802862/133‑1 (MQ=255)

                                                                                 aCTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAg                                                     >  2:1518190/1‑140 (MQ=255)

                                                                                 aCTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAg                                                     >  2:421167/1‑140 (MQ=255)

                                                                                      aTGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGtt                                                >  2:753872/1‑140 (MQ=255)

                                                                                           aaaTTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCt                                           <  2:1423566/140‑1 (MQ=255)

                                                                                           aaaTTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCt                                           <  1:732344/140‑1 (MQ=255)

                                                                                                    gTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTcc                                  >  2:464885/1‑140 (MQ=255)

                                                                                                        aGTTCGTAAAGTATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATg                              <  2:829818/140‑1 (MQ=255)

                                                                                                                   tATTTTTTGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAg                   >  2:937370/1‑140 (MQ=255)

                                                                                                                     ttttttGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAgcg                 >  1:806411/1‑140 (MQ=255)

                                                                                                                     ttttttGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAgcg                 >  1:1059331/1‑140 (MQ=255)

                                                                                                                      tttttGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAgcgc                >  1:96249/1‑140 (MQ=255)

                                                                                                                        tttGATCCTTGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCg              <  1:1388679/140‑1 (MQ=255)

                                                                                                                                ttGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAg      >  1:117461/1‑140 (MQ=255)

                                                                                                                                 tGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAGc     >  2:1009296/1‑140 (MQ=255)

                                                                                                                                 tGCAGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAGc     >  2:788680/1‑140 (MQ=255)

                                                                                                                                    aGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAGCTGa  <  1:1518190/140‑1 (MQ=255)

                                                                                                                                    aGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAGCTGa  <  1:464885/140‑1 (MQ=255)

                                                                                                                                    aGTCCGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAGCTGa  <  1:1033366/140‑1 (MQ=255)

CCCGTCACTCTGACGGGTATATCAATGCGTCTGGCTTGCCTTTATACTACCGCGCGTTTGTTTATAAACTGCCCAAATGAAACTAAATGGGAAATTTCCAGTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCTGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAGCTGA  >  NC_000913/3522771‑3523042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`