BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	41,063	A→G	V290A (GTG→GCG)	caiT ←	L‑carnitine:gamma‑butyrobetaine antiporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	41,063	0	A	G	100.0%	361.1 / NA	99	V290A (GTG→GCG)	caiT	L‑carnitine:gamma‑butyrobetaine antiporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (51/48); total (51/48)

Only 100 of 101 total aligned reads displayed.

AGGAAGATACTCATCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAA  >  NC_000913/40928‑41198

aGGAAGATACTCATCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGa                                                                                                                                     <  1:1160496/140‑1 (MQ=255)

  gAAGATCCTCATCTGGATAGCATAAATCCCCCCCCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAAt                                                                                                                                   <  2:93002/140‑1 (MQ=255)

  gAAGATACTCATCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAAt                                                                                                                                   <  1:962008/140‑1 (MQ=255)

  gAAGATACTCATCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAAt                                                                                                                                   >  2:790639/1‑140 (MQ=255)

  gAAGATACTCATCTGGATAGCATAAACCCCCCCCCATGCCCAGTAGAACACGGTCAAGCCCTGCGGGAGCCCCCCTTGAGCGAGGGGATCGGTATAGAACAACAGGCGCGGCAGATACACCAGCAACTTCCCCGCCGAAt                                                                                                                                   <  2:243283/140‑1 (MQ=255)

    agttccTCATCTGGAAAGGATAAATCCCCCGACATGCCGAGGAGAACACGGTCGAGCCTGGGGGGAAGCCGCTTTGAGGGATGGGAGCGTTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCg                                                                                                                                 <  2:220238/135‑1 (MQ=255)

       tACTCATCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTg                                                                                                                              <  1:1104230/140‑1 (MQ=255)

         cTCATCTGGATAGCATAAATCCCCCACCATCCCCAGAAGAACACGTTCCAGCCCTGCGGGAACCCGCTTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACACCAGCAACATCCCCGCCGAATCGGTGaa                                                                                                                            <  2:598290/140‑1 (MQ=255)

          tCATCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAag                                                                                                                           <  1:424412/140‑1 (MQ=255)

           cATCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAagt                                                                                                                          >  2:813634/1‑140 (MQ=255)

            aTCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAagta                                                                                                                         >  1:896565/1‑140 (MQ=255)

            aTCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAagta                                                                                                                         >  1:903584/1‑140 (MQ=255)

               tGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCgg                                                                                                                                <  1:1210170/130‑1 (MQ=255)

               tGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCgg                                                                                                                                >  2:1210170/1‑130 (MQ=255)

               tGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGtt                                                                                                                      <  1:492082/140‑1 (MQ=255)

                   tAGCATAAATCCCCCCCCATGCCCGGAAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCatg                                                                                                                  <  2:896565/140‑1 (MQ=255)

                    aGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACGTCCCCGCCGAATCGGAGAAGTAGTTCagga                                                                                                                 >  2:755389/1‑140 (MQ=255)

                    aGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCatga                                                                                                                 >  2:35078/1‑140 (MQ=255)

                    aGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCatga                                                                                                                 >  1:598290/1‑140 (MQ=255)

                    aGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCatga                                                                                                                 >  1:703891/1‑140 (MQ=255)

                      cATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCatgatg                                                                                                               >  1:805721/1‑140 (MQ=255)

                      cATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCatgatg                                                                                                               >  2:917082/1‑140 (MQ=255)

                           aTCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAag                                                                                                                           <  1:563719/123‑1 (MQ=255)

                           aTCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAag                                                                                                                           >  2:563719/1‑123 (MQ=255)

                           aTCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCt                                                                                                          >  2:710845/1‑140 (MQ=255)

                           aTCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCt                                                                                                          >  1:680105/1‑140 (MQ=255)

                               cccaccATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCa                                                                                                      <  1:261849/140‑1 (MQ=255)

                               cccaccATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCa                                                                                                      <  1:813634/140‑1 (MQ=255)

                                ccaccaTGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCAc                                                                                                     >  2:116308/1‑140 (MQ=255)

                                    caTGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCt                                                                                                 >  1:1106606/1‑140 (MQ=255)

                                       gCCGAGAAGAACACGTTCCACCCCTGGGGGAAGCCGCCTTAAGCGAGGGGATCGGTATAGAACAACATGCGCGGCGGACACACCAGCAACACCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGAc                                                                                              <  2:40528/140‑1 (MQ=255)

                                       gCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGAc                                                                                              <  1:116308/140‑1 (MQ=255)

                                       ccccggaaGAACACGGCCCGGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGCAATAGAACAAGATCGGCGGCAGAAACATCAGCAACACACCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGAc                                                                                              <  2:23482/133‑1 (MQ=255)

                                       ccccAGTAGAACCCGGCCCAGCCCGGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGAc                                                                                              <  2:703891/139‑1 (MQ=255)

                                          cAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAAt                                                                                           <  2:903584/140‑1 (MQ=255)

                                            gTAGAACACGGTCCAGCCCTGCGGGAGGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGa                                                                                         <  2:805721/140‑1 (MQ=255)

                                            gTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGa                                                                                         <  1:755389/140‑1 (MQ=255)

                                            gTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGa                                                                                         <  1:563171/140‑1 (MQ=255)

                                             tAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGaa                                                                                        >  2:667358/1‑140 (MQ=255)

                                                 accgggTCCAGCCTTGCGGAAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATCCATCAGCAACACCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACacc                                                                                    <  2:1202191/136‑1 (MQ=255)

                                                 acacGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACacc                                                                                    <  1:1199285/140‑1 (MQ=255)

                                                     ggTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACacccaac                                                                                >  1:69936/1‑140 (MQ=255)

                                                     ggTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACacccaac                                                                                >  1:927604/1‑140 (MQ=255)

                                                      gTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACacccaacc                                                                               >  1:225833/1‑140 (MQ=255)

                                                      gTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACacccaacc                                                                               <  1:759894/140‑1 (MQ=255)

                                                      gTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACACCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACacccaacc                                                                               <  2:708186/140‑1 (MQ=255)

                                                       tCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGAAACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACacccaaccc                                                                              >  2:642827/1‑140 (MQ=255)

                                                                 cGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGa                                                                    >  2:191284/1‑140 (MQ=255)

                                                                 cGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGa                                                                    >  2:674550/1‑140 (MQ=255)

                                                                 cGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGa                                                                    >  2:667930/1‑140 (MQ=255)

                                                                 cGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGa                                                                    >  2:1062328/1‑140 (MQ=255)

                                                                 cGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGa                                                                    >  1:745474/1‑140 (MQ=255)

                                                                  gggAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGaa                                                                   <  1:667930/140‑1 (MQ=255)

                                                                    gAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGc                                                                 <  1:35078/140‑1 (MQ=255)

                                                                    gAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGc                                                                 <  2:680105/140‑1 (MQ=255)

                                                                      aGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTc                                                               >  1:716385/1‑140 (MQ=255)

                                                                            cTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTaa                                                         <  1:917082/140‑1 (MQ=255)

                                                                            cTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTaa                                                         <  1:690200/140‑1 (MQ=255)

                                                                            cTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAAATACATCAGCAACACCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTaa                                                         <  1:500199/140‑1 (MQ=255)

                                                                                   gATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCa                                                  <  1:95042/140‑1 (MQ=255)

                                                                                     tGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACg                                                >  1:116932/1‑140 (MQ=255)

                                                                                        gaccGGTATAAAACAACATGCGCGGAAAATACATCAGCAACTTCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCa                                             <  2:183708/137‑1 (MQ=255)

                                                                                        gATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCa                                             <  1:667358/140‑1 (MQ=255)

                                                                                         aTCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCAc                                            <  1:191284/140‑1 (MQ=255)

                                                                                         aTCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCAc                                            <  1:1062328/140‑1 (MQ=255)

                                                                                           cGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTg                                          <  2:745474/140‑1 (MQ=255)

                                                                                           cGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTg                                          >  1:1193996/1‑140 (MQ=255)

                                                                                              tataGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCg                                       <  1:674550/140‑1 (MQ=255)

                                                                                              tataGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCg                                       <  2:49363/140‑1 (MQ=255)

                                                                                               ataGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGa                                      <  2:1126856/140‑1 (MQ=255)

                                                                                                taGAACAACATGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGAt                                     <  2:225833/140‑1 (MQ=255)

                                                                                                    acaacaTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGt                                 >  2:101599/1‑140 (MQ=255)

                                                                                                     caacaTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTa                                <  2:1193996/140‑1 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCa                                             >  1:320413/1‑124 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCa                                             <  2:320413/124‑1 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTAccc                             >  2:607737/1‑140 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTAccc                             >  2:1034724/1‑140 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTAccc                             >  2:151593/1‑140 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTAccc                             >  2:1156757/1‑140 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTAccc                             >  2:494310/1‑140 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTAccc                             >  1:1092299/1‑140 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTAccc                             >  1:108755/1‑140 (MQ=255)

                                                                                                        caTGCGCGGCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTAccc                             >  1:92438/1‑140 (MQ=255)

                                                                                                                gCAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGc                     >  1:128188/1‑140 (MQ=255)

                                                                                                                 cAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCa                    <  1:676770/140‑1 (MQ=255)

                                                                                                                 cAGATACATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCa                    <  1:967163/140‑1 (MQ=255)

                                                                                                                      aCATCAGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCg               >  2:417759/1‑140 (MQ=255)

                                                                                                                           aGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGc          <  1:1034724/140‑1 (MQ=255)

                                                                                                                           aGCAACATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGc          >  1:123255/1‑140 (MQ=255)

                                                                                                                              aaCATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGAc       >  2:226683/1‑140 (MQ=255)

                                                                                                                              aaCATCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGAc       >  2:785514/1‑140 (MQ=255)

                                                                                                                                  tCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCaa   <  2:128188/140‑1 (MQ=255)

                                                                                                                                  tCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCaa   >  2:768794/1‑140 (MQ=255)

                                                                                                                                  tCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCaa   <  2:116932/140‑1 (MQ=255)

                                                                                                                                  tCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCaa   >  1:959877/1‑140 (MQ=255)

                                                                                                                                  tCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCaa   >  2:577300/1‑140 (MQ=255)

                                                                                                                                  tCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCaa   >  2:1109651/1‑140 (MQ=255)

                                                                                                                                  tCCCCGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCaa   >  2:321549/1‑140 (MQ=255)

                                                                                                                                  tCCCCGCCGAATCGGTGAAGT‑GTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCaaa  >  2:476276/1‑140 (MQ=255)

                                                                                                                                   ccccGCCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCaaa  <  2:123255/140‑1 (MQ=255)

AGGAAGATACTCATCTGGATAGCATAAATCACCCACCATGCCCAGTAGAACACGGTCCAGCCCTGCGGGAAGCCGCCTTTAGCGATGGGATCGGTATAGAACAACATGCGCGGCAGATACATCAGCAACATCCCCACCGAATCGGTGAAGTAGTTCATGATGAAGCTGGCACCGCTGACAATGAACACCCAACCCAGCATCAGGAAGCTCAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAA  >  NC_000913/40928‑41198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`