Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,394,188	Δ1 bp	coding (859/1842 nt)	nuoL ←	NADH:quinone oxidoreductase subunit L

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,394,185	0	C	.	100.0%	368.8 / NA	87	coding (862/1842 nt)	nuoL	NADH:quinone oxidoreductase subunit L
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (44/43);  total (44/43)

GGAAAATCGCCGCATCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCA  >  NC_000913/2394047‑2394319                                                                                                                                           |                                                                                                                                       ggAAAATCGCCGCATCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGcc                                                                                                                                       <  2:900249/140‑1 (MQ=255) ggAAAATCGCCGCATCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGcc                                                                                                                                       <  2:1373973/140‑1 (MQ=255)  gAAAATCGCCGCATCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGccc                                                                                                                                      >  1:750256/1‑140 (MQ=255)    aaaTCGCCGCATCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGcccga                                                                                                                                    <  2:1267514/140‑3 (MQ=255)          ccgcATCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATAc                                                                                                                             <  2:484582/140‑1 (MQ=255)             cATCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGcccgaca                                                                                                                                  >  2:304266/1‑129 (MQ=255)             cATCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGcccgaca                                                                                                                                  <  1:304266/133‑5 (MQ=255)               tCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACccacc                                                                                                                        <  1:485635/140‑1 (MQ=255)               tCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACccacc                                                                                                                        <  1:635201/140‑1 (MQ=255)               tCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACccacc                                                                                                                        <  1:1290998/140‑1 (MQ=255)                        tGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGa                                                                                                               >  2:1445708/1‑140 (MQ=255)                        tGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGa                                                                                                               >  1:1165236/1‑140 (MQ=255)                        tGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGa                                                                                                               >  1:642239/1‑140 (MQ=255)                          cACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAAc                                                                                                             >  1:621107/1‑140 (MQ=255)                          cACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAAc                                                                                                             >  1:250210/1‑140 (MQ=255)                          cACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAAc                                                                                                             >  2:1341409/1‑140 (MQ=255)                          cACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAAc                                                                                                             >  1:662767/1‑140 (MQ=255)                          cACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAAc                                                                                                             >  1:749701/1‑140 (MQ=255)                          cACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAAc                                                                                                             >  2:1237968/1‑140 (MQ=255)                                 aGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGTGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGc                                                                                                      >  1:641084/1‑140 (MQ=255)                                 aGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGc                                                                                                      >  1:677469/1‑140 (MQ=255)                                 aGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGc                                                                                                      <  2:1056621/140‑1 (MQ=255)                                  gcgcGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCg                                                                                                     <  1:145889/140‑1 (MQ=255)                                  gcgcGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCg                                                                                                     <  2:648760/140‑1 (MQ=255)                                  gcgcGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCg                                                                                                     <  1:1445708/140‑1 (MQ=255)                                  gcgcGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCg                                                                                                     <  1:1433497/140‑1 (MQ=255)                                  gcgcGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCg                                                                                                     <  2:1376287/140‑1 (MQ=255)                                      gAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGtcat                                                                                                 <  2:642239/140‑1 (MQ=255)                                       aGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCg                                                                                                        <  2:133502/132‑1 (MQ=255)                                       aGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCg                                                                                                        >  1:133502/1‑132 (MQ=255)                                             aTGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAAc                                                                                          <  2:503553/140‑1 (MQ=255)                                             aTGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAAc                                                                                          <  1:1284152/140‑1 (MQ=255)                                              tGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACa                                                                                         >  1:280590/1‑140 (MQ=255)                                              tGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACa                                                                                         <  1:1341409/140‑1 (MQ=255)                                              tGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACa                                                                                         <  2:280590/140‑1 (MQ=255)                                                  gCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGTAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGcc                                                                                     >  1:1431241/1‑140 (MQ=255)                                                  gCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCg                                                                                                     <  1:433642/124‑1 (MQ=255)                                                  gCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCg                                                                                                     >  2:433642/1‑124 (MQ=255)                                                  gCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGcc                                                                                     >  2:957649/1‑140 (MQ=255)                                                  gCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGcc                                                                                     <  2:297585/140‑1 (MQ=255)                                                  gCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGcc                                                                                     <  2:750256/140‑1 (MQ=255)                                                   ccAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCg                                                                                    >  2:1113242/1‑140 (MQ=255)                                                    cAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGt                                                                                   <  1:957649/140‑1 (MQ=255)                                                       tCTGGCTCATGGTAGAGTAAGTGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTggg                                                                                <  2:641084/140‑1 (MQ=255)                                                       tCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGTAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTggg                                                                                <  2:1431241/140‑1 (MQ=255)                                                       tCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTggg                                                                                <  2:677469/140‑1 (MQ=255)                                                       tCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTggg                                                                                >  2:1168845/1‑140 (MQ=255)                                                          ggCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTAc                                                                             <  2:621107/140‑1 (MQ=255)                                                             tCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCTGCGTCATCAGGAACAGGCCGTGGGTACggg                                                                          <  2:662767/140‑1 (MQ=255)                                                             tCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACggg                                                                          <  2:1165236/140‑1 (MQ=255)                                                                tGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACggg                                                                          >  1:753594/1‑137 (MQ=255)                                                                tGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACggg                                                                          <  2:753594/137‑1 (MQ=255)                                                                 ggTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      >  1:791187/1‑140 (MQ=255)                                                                  gTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATc                                                                     <  2:791187/140‑1 (MQ=255)                                                                     gagTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAgg                                                                  >  1:994526/1‑140 (MQ=255)                                                                        tAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACg                                                                            <  1:1027642/127‑1 (MQ=255)                                                                        tAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACg                                                                            >  2:1027642/1‑127 (MQ=255)                                                                         aaGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      >  2:1089966/1‑132 (MQ=255)                                                                         aaGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      <  1:1089966/132‑1 (MQ=255)                                                                          aGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACTATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGac                                                             >  2:1028668/1‑140 (MQ=255)                                                                          aGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCg                                                                        >  1:1469285/1‑129 (MQ=255)                                                                          aGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCg                                                                        <  2:1469285/129‑1 (MQ=255)                                                                          aGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGac                                                             >  2:1386150/1‑140 (MQ=255)                                                                          aGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGac                                                             >  2:774348/1‑140 (MQ=255)                                                                           gCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      <  1:1247073/130‑1 (MQ=255)                                                                           gCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      <  1:155942/130‑1 (MQ=255)                                                                           gCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      >  1:201057/1‑130 (MQ=255)                                                                           gCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      <  2:201057/130‑1 (MQ=255)                                                                           gCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      >  2:155942/1‑130 (MQ=255)                                                                           gCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      >  2:1247073/1‑130 (MQ=255)                                                                            cGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGacac                                                           >  2:350547/1‑140 (MQ=255)                                                                            cGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGacac                                                           >  2:1248957/1‑140 (MQ=255)                                                                               gaACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcg                                                        <  1:1028668/140‑1 (MQ=255)                                                                                aaCACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      >  1:479640/1‑125 (MQ=255)                                                                                aaCACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGAt                                                                      <  2:479640/125‑1 (MQ=255)                                                                                aaCACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcgc                                                       >  1:1117868/1‑140 (MQ=255)                                                                                aaCACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcgc                                                       >  2:732939/1‑140 (MQ=255)                                                                                aaCACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcgc                                                       >  1:205274/1‑140 (MQ=255)                                                                                 acacGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcgcg                                                      <  2:749701/140‑1 (MQ=255)                                                                                      ttcgATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTAc                                                 >  1:829580/4‑140 (MQ=255)                                                                                          aTGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcg                                                        <  2:492436/129‑1 (MQ=255)                                                                                          aTGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcg                                                        >  1:492436/1‑129 (MQ=255)                                                                                            gTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGt                                           <  1:151397/140‑1 (MQ=255)                                                                                              cGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTg                                         <  1:350547/140‑1 (MQ=255)                                                                                                gTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTgcg                                       <  1:732939/140‑1 (MQ=255)                                                                                                   tGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTgcggcg                                    <  1:166681/140‑1 (MQ=255)                                                                                                           cgcgGCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAg                            >  1:781318/1‑140 (MQ=255)                                                                                                               gCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGcgcg                        >  1:1336160/1‑140 (MQ=255)                                                                                                               gCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGcgcg                        >  1:1312756/1‑140 (MQ=255)                                                                                                               gCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGcgcg                        >  1:1310892/1‑140 (MQ=255)                                                                                                               gCAAAACCGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGcgcg                        >  2:774459/1‑140 (MQ=255)                                                                                                                     ccGGCCAGCAGCAGCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACa                  <  2:1312756/140‑1 (MQ=255)                                                                                                                          cagcagcagCGTAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGt             <  2:1310892/140‑1 (MQ=255)                                                                                                                                     tAACCG‑CCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCa  >  2:1206213/1‑140 (MQ=255)                                                                                                                                           |                                                                                                                                       GGAAAATCGCCGCATCCCATGCCTGCACGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCA  >  NC_000913/2394047‑2394319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑